Mercenaria mercenaria (northern quahog): 123528499
Help
Entry
123528499 CDS
T07835
Name
(RefSeq) contactin-4-like isoform X1
KO
K06761
contactin 3/4/5/6
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmer04515
]
123528499
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mmer00537
]
123528499
Cell adhesion molecules [BR:
mmer04515
]
Immunoglobulin superfamily
Contactins
123528499
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mmer00537
]
Others
123528499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_C17orf99
Ig_6
Fimbrillin_C
Ig_CD22
Receptor_2B4
Lectin_C
UL45
Motif
Other DBs
NCBI-GeneID:
123528499
NCBI-ProteinID:
XP_045164194
LinkDB
All DBs
Position
13:58822524..58884287
Genome browser
AA seq
1354 aa
AA seq
DB search
MSILYRIKKNSYLVCCNHHLHASKLVVCHLQKKGRNSYLYWKTAILYRYVKMKTLLLLLI
SVGGISAQNFNLFVCPEDWIPNGDRCYQFSFIPHKYDDAAHICQKNGAILLSVDSDVENT
FILTQLRRIDVMRNEWYTSGERDSSKSFARFVWTATSQEISLSSNIWINEYEPFNNDITR
DLLVYKYDMNRGLYGVAAVSNRWQRRNFICEISRNEVYRININKRGYDYGVPFKNMNDVH
RGPKFTVEASSTVVIIDEDQGMAKGMVYLECIGGGIPQPDYSWIRNNSGVIQPVDTSDDS
RYTITNGKLTIEDPKESKDAGIYQCKVENSVGAIVSAPAQLSFASLGEFPNIPVASVNPW
EYQGAVIECPDIASGFKQAVVYQWKKSEEDRYSGDIDKLRKMDVRPDLNNRLFVSGNGKL
YFSEVTDADNYFYYCIATLTTLNLNQNFISTTLSPSRTSKPVRLEVRANSGGTYAPRIQD
SFINVVPGSPVVGMNISLECFAYGTIPLTYTWKVPSGVRGRYELTDSNRVLKIQNVQQDD
SGEYSCRVTNSIGNGQQSDNKTYTLYVESKPDFIVPLTDQHLDKGTRQLTWRCEARGVPF
PVYTWLRNGEIIQNSSDGDRLVLANTLFLRNLQHDRDSGMYQCIAENSHGVSSTSAQLRI
LEVAPSFSKFPLPSSMGGAVGGNITIPCRPEAAPFPEITWFRNSANLNPVTDSGSRLQMT
IEGDLRIQDLSMSDQGTYECRAKNELGEDRSRTILSIMPRTQIYQPPRPQSVEVNKTAFM
YCQASFNQNKLDLVYLWAFNNRMIDIENNEHYRRGNSPDQQGGLYLIFAQYDHTGTYTCI
AQTQVDMANASASLVVTGPPGEPAGVQAYSASDKISQEVSDEGGVRETDVVLRWTDPVDT
HGAPIQTYMIYGQTNYTTEWKPLYTYIPQFDTVILGGVDSQRRQYLVRNLSPGVGYSFKI
KAVNMYGVGLESEPTRRTTIPGSKPTKAPKNVGGGGGSVGTLRMTWDALPPEDHNGWGIG
YEVEYRLRPPPGEEQTSNIKWNKIEVIGNASETSAVIGVENYYLLYQVRVTPVNIFGSGP
TAQNDSVYSAEEMPIGIPSNIYAEPFNESAIIVHWDPVPLDRTFMKGELKGFKIDYWLMP
PNSTRNTQTVQNLENRIDNKQAIFYGNINQGMIIGLRNNTWYTVTVTVFNNAGNGLKSEV
AHQKTDKSAPRNYPVHIRVFPYEENSVVVRFRGVSTTVDEEPLLGYKIRYWRDTEDIRNA
TDISIGKNTEGTIYQIQAGYLYHLRVLGYSVGGDGKMSSPETLFTYTRGRVTQVSVDPTT
TNVTFVSHDMMDSAHSATSCVIVMITALLMLILI
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttatatagaataaagaagaacagctatttagtgtgttgtaaccaccacctt
catgcgtcaaaattagtggtgtgtcacctgcaaaagaaggggcgtaactcttacttatac
tggaaaaccgccattttgtacagatatgtaaaaatgaaaacactgctattacttctaatt
tcggttggtggtatctcggcacagaacttcaatttgtttgtgtgcccggaagactggata
ccaaatggagacagatgttaccagttctcatttattccacacaagtatgatgatgcagcc
catatttgtcagaaaaatggtgccattctactgagcgtagacagtgatgttgaaaataca
ttcattttgacacagctgaggagaatagatgtgatgagaaatgaatggtatacgagtgga
gaacgtgactcctcaaaatcatttgcaaggtttgtgtggacagctacaagccaggagata
tcactgtcctcaaacatttggattaatgaatatgaaccattcaacaatgatataactcga
gacttacttgtgtacaagtatgatatgaatagaggactttacggagtagcagcagtgtca
aacagatggcagcggagaaatttcatttgtgagattagcagaaatgaagtgtacagaatc
aacattaacaaaagaggctatgattatggggtgccattcaaaaatatgaacgacgtgcac
aggggtccgaagttcactgtagaagcatcgagtactgttgtgatcattgacgaagaccag
ggtatggctaagggaatggtgtacttggaatgtattggtggagggatacctcagcctgat
tatagctggatcagaaataactctggtgtcatacaacctgtagacacaagtgatgactca
cgttacactattacaaatggaaaattgaccattgaagaccctaaggaaagtaaagatgct
gggatatatcaatgcaaggtggaaaactctgtaggggcaatcgttagtgctcccgctcaa
ctctcgtttgcaagtcttggagaattcccaaatattccagttgcctctgtcaatccttgg
gagtaccagggtgctgtcattgaatgtccagatatagcttcaggttttaaacaagctgtt
gtataccagtggaagaaatcagaggaggatcgctattctggagatattgacaaattacgt
aaaatggacgtcagaccagatttaaataaccgtctttttgtctccggcaatggaaaactg
tatttctcagaagtcacagatgcggataactatttctactactgtattgcaacattgaca
acactgaatctgaaccagaacttcatcagtacgaccctgagtccaagtcgaaccagtaaa
cctgttcgtcttgaagtccgtgctaattctggtggaacatatgcgccaagaattcaagat
agtttcataaatgtggttcccggttcaccagttgtcggcatgaacataagtctcgagtgt
tttgcctatggaacaattccactaacatatacatggaaagtgccgagtggagtacgaggt
cgttatgaactgacagatagtaatcgggttctgaagatacaaaatgtacaacaggatgac
tcaggagagtattcatgccgcgtgactaattctatcggcaatggacagcagtcagacaat
aagacctatactctttatgttgaatccaagccggactttattgtaccattgactgaccag
catcttgacaagggaactcgacagttaacatggcggtgtgaagctcgtggtgtaccattc
ccagtttatacttggttaaggaatggtgagattatacaaaatagctccgatggtgaccgt
cttgttttggccaacacgcttttcctgaggaatctgcagcatgacagagatagcggaatg
tatcagtgtatagcggaaaattcacatggcgtgtcttcaacttctgcacaactaagaatt
ttagaggtggcgccgtcattttcgaagtttccgcttccttcaagtatgggtggtgcagtt
ggtggtaacatcacaatcccttgtcgcccagaagcagccccattcccagaaataacctgg
ttccgtaacagtgccaacttgaatcctgtgaccgattctggatctcgtttgcagatgacc
atcgaaggagatttaaggattcaagacttgagtatgtcagatcagggaacatatgaatgt
cgtgctaagaacgagcttggtgaggacaggagtagaacaatcctcagtataatgccacgc
acccagatataccagccaccaagaccacagtctgtagaagtgaataaaactgccttcatg
tactgtcaggcttccttcaaccagaacaaacttgacctcgtatatctatgggcgttcaat
aacaggatgatagatattgaaaacaatgaacactacagaaggggcaattccccagaccag
caaggaggtttatatctgatatttgcccagtatgatcatactggtacatacacatgtatt
gcacaaacacaagttgacatggctaatgcttcagcctcactggttgttacaggtccccca
ggggagcctgctggtgtgcaggcatacagtgcttctgataagatctcacaagaagtgtcg
gatgaaggtggggtaagggaaactgatgtcgtcctcagatggacagatccagtagatact
catggggctcctatacagacttacatgatctatggacagacaaattacaccactgaatgg
aaacctctatacacatatatacctcagtttgacacagtgatactgggaggagtagattca
cagagacgtcaatatctggtgcgcaatcttagccctggagttggctattccttcaagata
aaagcagttaacatgtatggtgttggactagaaagcgaacctactaggcgtacaacgata
ccaggctctaaaccaacaaaagcaccgaaaaatgttggcggtggaggaggtagtgtagga
accctaagaatgacctgggatgcattgccgccagaggatcataatggatggggtatagga
tacgaggttgagtatagattgaggcccccaccaggcgaggaacaaacaagcaatatcaaa
tggaacaagattgaagtgattggtaatgcaagtgaaacatcagcagttattggggtagag
aactactacctactgtaccaggtcagggtcacaccagtaaatatatttggatccggacct
acagcacagaatgacagtgtgtactcagctgaagagatgccaataggaattccaagcaat
atttatgctgaaccattcaacgagtcagccattattgtacactgggaccctgtaccacta
gataggacttttatgaaaggtgaactgaaaggattcaagatcgattactggctgatgcca
ccaaacagtacacgaaacacgcaaactgtacaaaacttagaaaatcgtattgataacaaa
caagcgatcttttatgggaatatcaaccagggaatgattatagggctcagaaataacacc
tggtacacagtcactgttacagtatttaacaatgctggcaatggacttaaaagtgaagtg
gctcaccagaaaacggacaaatcagcccctcggaactatccagttcacatcagagtgttt
ccgtatgaggagaattctgtggttgtaaggttccgaggtgtatctacaactgtagatgaa
gaaccacttttaggttataagattcgatactggagggatacagaggacatcaggaatgca
acagacatttcaattgggaagaacacagagggtacaatctatcagatacaggctgggtac
ctgtaccatctgagagtgttgggatacagtgttggtggagatggaaaaatgagctcacca
gaaacactttttacatataccaggggccgggtaacacaggtgagcgtggatccaacaaca
acaaatgtgacatttgtgtcacatgacatgatggattctgcacattccgcaacgtcatgt
gttattgtcatgattacagcattgctcatgctcatccttatctag
DBGET
integrated database retrieval system
