Mercenaria mercenaria (northern quahog): 123528759
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Entry
123528759 CDS
T07835
Name
(RefSeq) protein Smaug homolog 1-like
KO
K27396
protein Smaug
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123528759
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123528759
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
DUF4508
Motif
Other DBs
NCBI-GeneID:
123528759
NCBI-ProteinID:
XP_045164668
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All DBs
Position
1:complement(100950619..101018850)
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AA seq
727 aa
AA seq
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MRMKSNNMFRDQVNSVTTWFGSWSTCEQTVVLYSLLKLIPPRHCRFLVQMLQQRITDDKD
VEIQEDEANDPVYICKLQQEPKEKAIQELLIHLPLLHSGNTKAKNEYLNLIPHILSHSIE
NGVFIEESRQLLSYSLIHPAITCEERSKFNMWLGHLDERFSNSQFHSPSQQTQGQPDNLQ
GQVPFSHQPESGNSLRTHVTLAKTNSIGNAQINGWNSSVFQSSESLNLNGLDGQGQTGSH
GNIHGNGRVQPGQHLQTSVGGVSGHMPLQATLSAPPNFNTIVPPTSLTSVSQQNQPAPSQ
PASHHAPLRRMHSFAPPNTLPINTSSVSEWLKSNDAHLIQGPGRPGSVLSDHAPLSPQSS
TASSGSGSDEHREDGPHPVRNTFMEEGSGMRDVPLWLKSLRLHKYAYLFQQMTYEDMMSI
REDWLTHQNVTKGARNKIVLSIKKLQERQDVLRNLERDITESGSIKNCITEMKLMLNSPL
KAFYKPETDTQGTLNSPGSSGDADNTIQEGDIPGQFTRLMTKVFTQLMLTSPYDDEGLNM
YLQLIDKCINHEAFSQKQKRLLDSFKQQARKIWQPAPVKYSYDKKPRPNWGNTFPMGNVY
NSRPIQRMGVKTSPKPPVQGGMQWSFGAKRSLVGGTSSSGHLQLQRNNSHNTAVFSRPGM
VEHPVKQPVTRTQSAPLRTHSMLYGGLPMSESQATDTEINARLDSLCRSVTECALAGSDG
NERGSAY
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgaaatcgaacaatatgtttcgagaccaggtgaactcggtgacgacgtggttt
ggcagttggagcacttgtgagcaaactgtggtactctactcactgctcaagttaattccg
ccgcgtcattgtcggttcttagtgcaaatgctacagcagagaataactgacgataaagat
gtagaaatacaagaagatgaagcaaatgatccagtgtacatctgcaaacttcagcaagaa
ccgaaggaaaaggcaattcaggaacttttgatacaccttccattactacactcgggaaac
acaaaagccaaaaatgagtaccttaaccttataccccatatcctctctcattccattgaa
aatggcgtctttattgaagaaagtcgtcagttgttgtcttactctctcatacatcctgcc
attacatgtgaagaaaggtcaaagttcaacatgtggctgggccacttggacgaacgattc
agtaatagtcagtttcattcaccttcacaacaaactcaaggtcagcctgacaatcttcaa
ggtcaggtgcctttttcacatcagccggagagcgggaactcgttacggactcatgtgact
ctagcaaagacaaattctataggaaatgcacagataaatggatggaatagcagtgtattt
cagtctagtgaatcactgaacttgaatggccttgatggacaaggtcagaccggtagtcat
ggcaatatccatggtaacggaagggttcaacctgggcagcacttgcagacaagtgtaggc
ggtgtatctggtcatatgccgctgcaggcgaccctgtcagccccacctaacttcaatacc
atagtgccaccaacatcacttacatcggttagtcaacaaaaccagcctgcaccatcacag
ccagcctcccatcatgcacctttacgacgaatgcattcgttcgctccaccaaacactctg
cctatcaacacatcctctgtctcagagtggctaaaatctaatgacgcccatctcatccag
ggtcctggtcggcccggttctgtcctctctgaccatgctccattgtctccacagagcagc
acagcatcatcggggagcgggagcgacgaacacagggaagatggtccccatcctgtgaga
aatacatttatggaggaaggtagtggcatgcgagatgtacctctatggctaaagagcctc
aggttacacaagtatgcctacctgttccaacaaatgacatatgaagatatgatgagtatc
agagaagactggcttactcaccagaacgttaccaagggtgccagaaataagattgttctc
agtattaaaaaacttcaggaacgacaagatgtacttcgaaacctagaaagggacataaca
gagtcagggtccatcaagaattgtatcacagagatgaagctaatgctcaacagtcctctc
aaagccttctacaagcccgagaccgacacccagggtacccttaattccccgggctccagc
ggcgacgctgacaacactatacaggagggagatattcctggccagttcacacgccttatg
actaaagtgttcactcagttgatgttaacgagtccgtacgatgatgagggtctaaacatg
tatctgcaactcattgataaatgtatcaaccatgaggctttctcacagaaacagaagagg
ttacttgactcattcaaacaacaagcaagaaaaatctggcaacctgcaccagtcaagtac
agctatgacaaaaaaccaagaccaaattggggtaatacatttccaatgggtaatgtgtac
aacagtcgtcctatacagagaatgggtgtaaaaacttcaccaaaacctcctgttcagggt
ggcatgcagtggagtttcggggctaaacggtcccttgtgggtggcacaagcagttcaggg
catctacagctacagagaaataactcccataatacagcagtcttctcaaggccaggaatg
gtcgagcatccggtgaagcaacctgtgacgcgtacacaatcagcgccactgcggactcac
agtatgctgtatggtggcttgccaatgagcgagtctcaggcaacggacacagagattaat
gccagacttgactccctgtgcagaagtgtcaccgaatgtgcattggctggatcagatgga
aatgagcggggctcggcctactga
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