Mercenaria mercenaria (northern quahog): 123528872
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Entry
123528872 CDS
T07835
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123528872
Enzymes [BR:
mmer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
123528872
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
123528872
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
123528872
NCBI-ProteinID:
XP_045164854
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Position
13:76098167..76119796
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AA seq
561 aa
AA seq
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MRILSWNINGIRASKLNLKDLFESFNADVICLQETKVTRDMLDEPTAIVDGYNSYYSFSR
KRSGYSGTANFCRDSVTPVCAEEGLAGTLTVSETGSVGNYGNQTTFSDDELKDLDAEGRT
VITQHRIRLEDGTEKDLAVINVYCPRFDPERHDRHHYKLRFYALLQTRAEALLKSGSHVI
ILGDINTTHKDIDHCDPDDEASNKRPSRLWLNQMFWEQDKDPSLDTDIDKEEFSAATPYT
VGGKFVDTYRFFYPEKEGAFTNWCTLTNARATNFGRRLDYILADIDLANKCLKDASIMQD
VEGSDHCPIKIELNCKCLPAKTCPPLCTKFMPEFSGKQQKLSTFFTKLTKKEVNSSLNIC
KNNKESENIVKKEEPKSSPEGVKSLKRPEKSNSFSQPLKRQKTTELKKTDSSSKQASLMS
FFNKGAESKKRALKINQTMKVEQNKSSDKLETMETSSKYFSNEDKTRSNPEADDNEGKTA
KTTSIVNENTSETANAWKNLLGGLGPAPLCKGHNEPCVLRMVKKPGPNKGKQFYTCARGE
GLKSNPEARCDFFKWVVKKKT
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcttgtcttggaacattaacgggattagagctagtaaattaaatttaaaagat
ctatttgagtcttttaatgctgatgtaatatgtcttcaagaaacaaaagtaactcgggac
atgctggatgagcctacagctattgttgatggctacaattcttactacagcttctctagg
aaaagaagtggatattcaggcacagccaacttctgtagggacagcgtaacaccagtctgt
gcagaggaaggtctggctggtacactgactgtcagtgagacaggaagtgtaggtaactat
ggtaaccaaacaacattcagtgatgatgaactgaaggaccttgatgcagaaggcaggact
gtgatcacacaacacaggattaggcttgaagatgggactgagaaagacttggctgtgatc
aatgtatattgtcccagatttgacccagaaagacatgaccgccaccactataaactgagg
ttttatgctctacttcagacaagagctgaggcattgttaaagagtggaagtcatgtaata
atcctgggagatatcaacacaacacacaaagatatagaccattgtgatcctgatgatgaa
gcgtcaaacaagagaccaagcagactatggttaaaccagatgttttgggaacaagacaag
gatccgagccttgataccgatattgacaaggaggaatttagtgctgctactccgtataca
gttggtgggaagtttgtcgatacttacagattcttctatcctgaaaaggaaggtgcattt
accaactggtgtactctgaccaatgccagagctacaaacttcggtagaagactggattat
attctagcagacattgatcttgccaacaaatgtctcaaggatgccagcatcatgcaggat
gtagagggctcagaccactgtcctataaagatcgaattaaattgtaaatgtttaccagca
aaaacctgccctccgctgtgtaccaaatttatgcccgagttcagtggtaaacaacagaag
ttatctacattcttcacaaagttaacaaagaaagaggttaacagttctctcaatatctgc
aaaaataataaagaaagtgaaaacattgtgaaaaaggaagaaccaaaaagtagtccggaa
ggtgtaaaaagtttaaaaagaccagaaaaatcaaatagtttttcacagccattaaaaaga
cagaaaactacggagttgaaaaaaactgacagcagttccaaacaagcaagtttaatgtct
ttctttaacaaaggggcagaatctaagaaaagggctttaaagataaatcagactatgaaa
gtagagcagaacaaaagttcggataaacttgaaaccatggaaacatcaagcaagtatttc
agtaacgaggataaaactaggtctaatcctgaggcagatgataatgagggtaaaacagca
aagacaactagcattgttaatgaaaacacctcagaaactgcaaatgcatggaagaatctg
ttaggtggacttggcccggctcccttgtgcaaaggtcacaacgaaccatgtgtgttacga
atggtaaaaaagccgggcccaaacaaagggaagcaattctatacctgtgcaagaggagag
ggtttgaaatccaatccagaggcaaggtgcgacttctttaagtgggtcgtgaaaaagaag
acatga
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