Mercenaria mercenaria (northern quahog): 123529158
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Entry
123529158 CDS
T07835
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03083
Polycomb repressive complex
mmer04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
123529158
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
123529158
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmer01009
]
123529158
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmer03036
]
123529158
03029 Mitochondrial biogenesis [BR:
mmer03029
]
123529158
Protein phosphatases and associated proteins [BR:
mmer01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123529158
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
123529158
HMT complexes
COMPASS/SET1 complex
123529158
MLL-HCF complex
123529158
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
123529158
Mitochondrial biogenesis [BR:
mmer03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
123529158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
123529158
NCBI-ProteinID:
XP_053378380
LinkDB
All DBs
Position
13:complement(78447412..78474908)
Genome browser
AA seq
1700 aa
AA seq
DB search
MAAPILKWKRVTNTSGPGPRPRHGHRAVAIKDLMVVFGGGNEGIVDELHVYNTATNQWFV
PAVRGDIPPGCAAYGFVCDGTRILVFGGMVEYGKYSNELYELQASRWEWKRLKPKNPRTG
LPPCPRLGHSFTLLGNRVYLFGGLANDSEDPKNNIPRYLNDLVVLELKPNSSQLQWDNPL
MVGQPPPPRESHTAVGYVEKDGRRPRLIIYGGMSGCRLGDLWQLDIDSMTWTKPLVNGLP
PLPRSLHSATVIGNRMFVFGGWVPLVMDDVKFATHEKEWKCTNTLASLNLDSMTWEPLAM
EVFEDALPRARAGHCSVAIHTRLYIWSGRDGYRKAWNNQVCFKDLWFLETEKPPAPSRVQ
LVRASTNALEVCWGAVPTADAYLLQLQKYDLPPAQTPTPTGTPTTNPLVKALPIPQQQPA
QQPVGQATPVAQVIRQANPGTALSQIRAVTGQLAAGTSPHTIKVTSMTRPQLKGPITVTT
MPGAVRVASPQVVSIPQQGQATRQVVATTVGSTSGGQMTGIAALAAAAAATQKIQGTSQQ
QTATAPVSSIKVVTPTIVTPQGVKVTPVSRQIAGTTIGSGNQTIRVAPPGSTIIRAASGA
QLTPGSKQIITVHKAGNVTQGGSGTGQPQIVTLVKTSQGMTVATSKGGTLPQGATIVKLV
TSQAGQGKPTAIITSQGHTGQTPSNIIGLSSVQPQAARPAGQTQTKTVIRTIPSSMISTV
KAGQAGIQTTPGGAKTIVIAAPKGGAAAGQTPTKILSSMPKIAGQGNTQFIVVSPQGSSV
VTPGGSSIASAIAGQHKTINVSALQQTLSGVVQSPQVVTAGVGKQNITVVSQAGGASQII
RTIPASQLISSSTATASSLLGTSSQPNVSLISGGSTHIGSPSIQVAQQATSKPVQITITP
QGQVATTPVVVQASEPAATDEADGACTDGIHCGTPPPQECTDGIHCGTPPPQGCTDGIHC
GTPPPQECTDGIHCGTPPPQECADGIHCGTPPPQECTDGIHCGTPPPQECTDGMHCGTPP
PQECTDGIHCGTPPPQECTDGMHCGTPPPQECTDGMHCGTPPPSENTHFIPIKDGTCPDG
IHCGTPPPQENNGTCPDGIHCGTPPPQENNGTCPDGIHCGTPPPQENNGTCSDGIHCGTP
PPQGNNGTCSDGIHCGTPPPQENNGTCSDGIHCETPPPQENNGTCSDGIHCGTPPPQETE
GNVEENQENVTATETDNQEATTSQEAEGAVAEGQEESEALPLTQLETGDALVTGEAEPVG
DALAAGDAISAGDMLTGGEASTTAVADDADAMMTTADDGDLQQLAEGTEAPAEVKEEPME
TGEAQQAQSEQAEQPPESEQSIDPVTGLHNGMPVQLDTSTSSGLLGQSVSLPDQIFATPN
SGQDTSGTDLKPEDLLLPKSEPVDLGLISQASDSGQDPLATLAMAAASSAGAVTSVKHEP
IRPTQETRVLTTVSTPKKEGNMWYDVGIIKGTSCLVSYYHLPAEGGQGDIAEKKDIDVVS
IQDHSVLKRQELLPGTAYKFRVAGINACGRGPWSEISAFKTCLPGYPGAPSAIKISKSAD
GAHLSWEPPQNTAGKITEYSVYLAVRNAAQQAEQKPGGAAQLAFVRVFCGPSASCVVNSN
SLASAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQDAAQGAAAAAAATNKLPVKRTVD
ASQLQAIQMKKIKTDDEAGM
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcccatcttgaaatggaagcgggttacaaacacttctggtccaggaccaaga
cctcgacatggtcacagagcagttgcaatcaaagatttgatggttgtatttggtggtggc
aatgagggtatcgtcgatgagcttcacgtttacaatactgcaacaaatcagtggtttgta
ccagctgtgcgtggagatataccacctggttgtgcagcttatggctttgtttgtgatggc
accagaattcttgtctttggtggaatggttgagtatggaaaatattcaaatgagctgtat
gaacttcaagcaagtcgatgggaatggaaaagattgaaaccaaaaaatccccgaacagga
ttacccccatgtcctcgattagggcacagtttcactcttcttggcaacagagtctacttg
tttggtggtctagcaaatgacagtgaagatccaaagaataatattccaaggtacttgaat
gaccttgttgtgttggagttgaagccgaactccagtcagttacagtgggataacccgctg
atggtaggacaaccaccaccgccgagagaatcacacactgctgtaggttacgtggagaaa
gatggccgcagaccaaggcttattatttatggtggtatgagtggatgcaggctaggagac
ctttggcagctagatattgattcaatgacctggacaaaacctcttgtaaatggattacct
cccttgcctagaagtcttcattcagccacagttattggaaacagaatgtttgtatttgga
ggatgggtcccacttgtaatggatgatgtcaaatttgctactcatgaaaaagaatggaaa
tgcacaaatactttggcttcattgaatttggactctatgacatgggaaccattggcaatg
gaagtatttgaggatgctctaccacgtgccagggctggacattgctctgttgctatacat
actagattgtatatttggagtggaagagacggctacaggaaagcatggaataaccaggtt
tgcttcaaggatttatggttcttagaaactgagaagccaccagcaccgtcgcgtgtccag
ctggtcagagccagtaccaatgccctagaggtgtgctggggagccgtacctactgcagat
gcctacttactacagttacagaaatatgatcttccaccagcccagactccaacccctaca
ggcacacccacaactaaccccctagtcaaggctttacctattccacaacaacagcctgcc
cagcaacctgtgggtcaggcaacacctgttgcacaagttattagacaagctaaccctgga
acagccttgtctcagattcgcgcagtcacaggacagctggctgccggcacttctcctcat
actatcaaagtgacaagtatgacacgtccccagttgaagggtcctattacagtaacaaca
atgcctggggctgtaagggttgcatcaccccaggttgtcagtataccacagcagggtcag
gctacaagacaggtcgtggcaaccacagttggttctacaagtggtggacagatgacgggt
attgctgccttggcagcagcggcggcagccacacagaagatccagggtaccagccagcag
cagacagcaactgcaccggtatccagcataaaagtagtcacacctacaatagtaacacca
caaggtgtcaaggtcactccagtttctagacaaattgcgggaactaccattggttctggc
aatcagactatcagggtagctccccctggaagcacgatcatacgtgcagcgagcggtgca
cagctgacacctggctcaaaacagatcatcacagtacataaagcggggaatgtaacccag
gggggtagtggaaccggtcagccacagattgtaaccctcgttaagacttcacaaggaatg
actgttgcaacaagcaaaggtggcacattgcctcagggagctaccatagtgaaacttgtc
acatctcaagcagggcagggtaaaccaacagctataatcacaagccagggacataccggc
cagacaccatcaaatattatagggcttagttcagttcaaccacaggcagcaagacctgct
gggcaaacccaaacaaagacagttatcagaacgattccgtcatctatgatatcaacagtg
aaggcgggacaagctggaatccaaactacaccaggaggagccaaaaccatcgtaatcgct
gccccaaaagggggagctgctgctggacagactccaaccaagatcctttcttccatgcca
aagattgctggtcagggtaacacccagtttattgtggtcagtccccagggaagcagtgtg
gtgacaccaggcggttcttctatagcttcagctattgctggtcagcataagacaataaac
gtgtcagccctgcagcagacgttaagtggtgtagtacagtcacctcaagttgtgacggca
ggtgtaggaaaacaaaacatcacagttgtatcacaagcaggaggtgcatcccagatcatc
aggacaataccagcatcacagctcatctcatcttctactgcaacagcctcctccctcctt
ggcacttccagccaaccaaatgtctctctcatatctggtggctccacccacatcggttcc
ccatcaatacaagttgctcagcaagcaacttccaaaccagtgcagatcactataactccg
caaggtcaggttgccactacaccagtggtggttcaagcctcagaaccagctgctactgat
gaagcagatggtgcttgtacagatggtattcactgtggaactccacccccacaggagtgt
acagatggtattcactgtggaactccacctccacaggggtgtacagatggtattcactgt
ggaactccgccgccacaggaatgtacagacggtattcactgtggaactccgcctccacag
gagtgtgcagatggtattcactgtggaaccccgcccccacaggagtgtacagatggtatt
cactgtggaaccccgcctccacaggaatgtacagatggaatgcactgtggaactccgccc
ccacaggagtgtacagatggtattcactgtggaactccacccccacaggaatgtactgat
ggaatgcactgtggaactccaccaccgcaggagtgcacagatggaatgcattgtggaact
ccgcccccatcagaaaatacacactttatacctataaaagatggaacatgtcctgatgga
atacactgcggaacacctccccctcaggaaaataatggaacctgcccagatggaatccac
tgtggaacacctcccccacaggaaaataatggaacttgccctgatggaatccactgtgga
acacctccccctcaagaaaataacggaacttgctctgatggaatccactgcggaacaccg
ccccctcaggggaataatggaacttgctctgatggaatccactgtggaacacctccccct
caagaaaataacggaacttgctctgatggaatccactgcgaaacaccaccccctcaggag
aataacggaacttgctctgatggaattcactgtggaacacctcccccacaagaaactgaa
ggaaatgtggaagaaaaccaagaaaatgttacagctacagaaactgataatcaagaggca
acaacatcacaggaagctgaaggtgctgttgctgagggacaagaggaatccgaagctctt
ccactgacacagcttgaaacaggagatgcattggttactggggaagctgaaccagtggga
gatgcacttgctgctggtgacgccatttctgcaggagatatgctgactggtggagaggca
tcaacaacagctgttgcagatgatgctgatgcaatgatgaccacagcagacgacggagat
ctacagcagttagcagagggtaccgaggccccagcagaggtaaaagaagaaccaatggaa
acaggcgaggcccagcaggcccagtctgaacaagcagagcagccacccgagagtgaacag
agtatagacccagttactggactgcacaacggtatgccggttcagcttgacacgtctact
agcagtggtctgctcggtcagtctgtctctctacctgaccaaatattcgcaacaccaaac
tctggtcaggacacttcaggtacagacctaaaaccagaggaccttctcctgccaaagtct
gagccagtagacctgggactgattagtcaggcttcagattctggtcaagatcctctagcg
acactggccatggcagctgcttcctctgctggtgctgtaaccagtgttaaacatgaacca
atcagacctacacaagagactagggtgctaactacagtgtctacaccaaaaaaagaaggg
aacatgtggtatgacgttggtatcataaaaggaacgtcctgtcttgtgtcatactaccat
cttccggccgagggaggacagggagatatagctgaaaaaaaggatatagatgtggtatca
atacaagatcacagtgtattgaagagacaagagttgttacctggaacagcgtataaattc
cgtgttgctggtatcaacgcctgcgggagagggccatggagtgaaatttcagcattcaag
acttgtctacctggatatccaggtgcaccatcggccattaaaatcagtaaaagtgcagat
ggggcacatctttcttgggagccccctcagaatactgcaggcaaaatcacagaatattct
gtatatcttgctgtacgtaatgcagctcagcaagccgaacagaagccaggtggtgctgct
caacttgcttttgtacgagtattttgtggacctagtgcatcatgtgttgttaattcaaat
agtttagccagtgctcatatagactatacaacaaaaccagcaattatattccgtatcgct
gcacgtaacgagaaaggatatggaccggcaacgcaagtcaggtggcttcaagatgcagct
caaggagccgcagcagcagctgcagcaacaaacaaattacctgtgaagaggactgttgat
gcatcacagctgcaagctattcagatgaagaagataaaaactgatgatgaggctggcatg
taa
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