Mercenaria mercenaria (northern quahog): 123530069
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Entry
123530069 CDS
T07835
Name
(RefSeq) laminin subunit beta-1-like
KO
K06243
laminin, beta 2
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123530069
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
ATG17_like
F5_F8_type_C
Sec3_CC
Alanine_zipper
Phage_Mu_Gp48
Laminin_II
Motif
Other DBs
NCBI-GeneID:
123530069
NCBI-ProteinID:
XP_045166695
EnsemblRapid:
LOC123530069
LinkDB
All DBs
Position
13:47792298..47874451
Genome browser
AA seq
1767 aa
AA seq
DB search
MEVVHIGLLVVVFATFQGAISQVGRRQPQCEQGSCYPATGDLLIGREGNLTTNSTCGMDR
RERYCIVSHLDDDKKCFLCDSRQPWSQQYSDSHRIENIVSSFRERKFKWWQAENGVQHAY
IQLDLEAEFHFTHLIMTFKTFRPKAMYVERSFDFGNTWNVYRYFAYDCARSFPGMPTGPV
RKLSDVICESRYSDVVPSTEGEVIFRVLPPFIRISDPYSQDVQDLLKLTNLRVVFTELHT
LGDIVFDGRQDIKEKYYYAMYDMTVRGSCSCYGHASRCIPVEGYASNPNMVNGQCECTHN
TKGLNCEQCLDFYNDSPWRPARTSEPNACKKCECYNHATSCHFDAGVWELTGRSSNGTYW
SGGVCDDCQHNTMGRNCQECRPFYYQDPHRDLRDPEVCQVCDCDPTGSMYDGECENRDDE
ELGMEAGRCICKTNVAGGRCDQCKEGYWNMNDDNPDGCEACTCNPMGTLENFGCDQYSGY
CTCKRYVTGRNCDECYPGFWGMSNDLNGCRPCDCDVGGAMGDACNVTNGQCTCKPNIQGR
QCHQVQPGYYFTRMDLYTYEAEFAKGIGNTRVYIREPVPEYTSWTGPGYMKIMEGDALEF
SGIVVDFPMYYDIVIRYDPRMQERWEDVRVSVIRDGFTNPDGPCANAIPQDDDKATSLQT
GARFITVDPPSCLESGVNYSIRIDFNRYKSDQSTPDATALIDSILLVPSTDSIPIFQGPG
LPEYMKNEYIRYRCRDLQLHVHKPELPELCRKHVFSISGIIHHRALDCDCDLTGSLSFEC
DPVGGQCQCKPHVVGRRCDQCAPGTFGFGPNGCTPCNCHAIGSRDNFCDIETGQCLCIPN
VHRRICEECEPGYYGFPYCRQCECNGNADICDNLTGQCDCRDNTTGHNCERCIDGYYGDP
RIDYRVPCKACMCPGGPDHPAQHADTCYYDPRLEYVVCNCDIGYRGPDCGTCDDNYFGNP
SEIGGTCDTCDCNDNIDPDDVGNCDGETGECLKCLFNTEGFNCEKCMPGYYGDALIQNCI
ECICNPIGTDPNGGECDRITGQCPCLPNVIGQKCDMSAPGHYNMTPGRGSEPCNCDPDGA
FGIECNELTGQCDCKPDRGGRTCSECRDLYWGDPNEECYACDCDNQGSATQQCDRRTGQC
VCLLGISGYKCDRCDRGTTGELPNCVPCGDCFDNWDRIIRDLRGQTEVLIEQGRNIQIEG
AAGAFDKEFRVMEDNLAEIKRIIENAGVSSYDVEELENMLKQIRENITDNVENLNTMDEE
LQTTMGRIQAGNNRIAALQLGVKDLNTKAQQLRRNASDIQAQDVEGAFNITKEAERRSQE
AQMMVDGTNKYLQDSQDVRERVERMLETNMEDFNKSLEDNQNALKELDMDVMELSGKITD
INTMVCDGTGDPCDDVCGGGGCGVCGGPSCEKGAVTKADNALDLAMKAEALLKVKEENAQ
GLHANVTAAHDLSQMAKAEAQMAFDEAAKARSVSEDTRTNLEQLLNEIRDFLRTEGATPQ
QIELMAQEVLAMSISLKPNQIIQLANEINNTIQGLQNIEDILDDTRDNLTLAQQLKERAD
NASKSAAAILDTAQGVLKALNGSREAQNKARQAIDKADTDINNAQTDLTQIESETAAAED
KSTETSDKVDKLKTNLEDLQSKINENEFRVQNAEQLANDAEDLAKKAEKDANDLEDRYPD
VLNRLNDKYNSTADAKGRVEKLRDRANKLATDTTAKLQKLQNMNAEFEGYEKQLTSLSDQ
IDKLNEDMTGYLAVIQQKANDYRTCTT
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggttcatataggattactggttgtagtttttgcaactttccaaggtgcaata
agtcaagttggacgacgtcagccacaatgcgagcagggcagttgttatcctgcaacggga
gatttgttgattggacgagagggtaatctcaccacaaattccacgtgcggtatggataga
cgcgaaagatactgtattgtcagccatttagacgatgacaaaaaatgttttctatgtgac
tcaaggcagccatggtcacaacagtatagtgatagtcaccggattgaaaatattgtttcc
tcttttcgtgagaggaagtttaaatggtggcaagcggaaaatggtgttcagcatgcttat
attcagttagacttagaggcggaatttcattttacacatttaattatgacatttaaaact
ttccgaccaaaagcaatgtatgttgaaaggtcctttgattttggaaatacgtggaatgta
tatcgatattttgcgtatgattgtgcaaggtctttccctggaatgccaactggtccagtt
aggaaattatcggatgtaatttgtgaatctcgctattcagatgttgtaccatcaacagaa
ggagaggtcatattccgagttttgccaccattcatcagaatttccgacccgtacagccag
gatgtacaggatctgctcaaacttaccaatctcagggttgtgtttactgaactccatact
cttggtgatattgtatttgatggcaggcaagacataaaagagaaatattactatgctatg
tatgatatgacagtgagaggaagttgttcctgttatggtcacgcctctagatgtatccct
gttgaaggatatgccagcaacccaaatatggtgaatggacagtgtgaatgtacccacaat
actaaaggtctaaactgtgaacagtgtttggatttctacaacgattcaccatggagacca
gccaggacgtccgaaccaaatgcttgtaaaaaatgtgaatgttataaccatgctacatct
tgtcactttgatgccggtgtttgggagttgacaggccggagtagcaacggaacatactgg
agtggtggtgtttgcgatgactgtcagcacaacacaatgggacgcaactgtcaggaatgt
agaccgttctattatcaggaccctcatagggatctcagggatccagaagtatgtcaagtc
tgtgactgtgatccgactggttctatgtatgatggtgaatgtgaaaaccgtgacgatgag
gaactcggaatggaagccggcaggtgtatatgtaaaacaaacgtagcaggtggacgatgt
gatcagtgtaaggaaggatactggaacatgaatgatgacaacccggatggatgtgaagca
tgtacctgtaacccaatgggaaccctggagaactttggttgtgatcagtactctggatat
tgcacatgtaaacgctacgttacgggtagaaattgtgatgaatgctatccaggtttctgg
ggtatgagcaatgatttgaacggctgcagaccatgtgactgcgatgtgggcggagctatg
ggagacgcttgtaatgttacaaatgggcagtgtacatgtaaaccaaacattcagggccgc
cagtgtcaccaagtgcagccaggatattactttacacgaatggatttgtacacgtacgaa
gctgaatttgcaaaaggaattgggaacacgagggtttacatcagggagcctgttcctgaa
tacactagttggactggaccaggctacatgaaaataatggagggtgacgctctagagttc
tccggaattgtcgtggattttccaatgtactatgacatcgtaatcagatatgatcccaga
atgcaggaaagatgggaagatgtcagagtcagtgtgataagggacggcttcacaaaccct
gatggtccctgtgccaatgccattccacaggatgatgacaaagccacgtctctccagacg
ggtgccagatttattactgttgacccaccatcttgtcttgagagtggtgtaaactacagt
atacgtatcgacttcaacagatacaagagcgatcagtcaacacccgatgctacagctctt
atagactcgatacttctggttcctagcactgatagtattccaatcttccaaggccctgga
ctaccagaatacatgaagaatgaatatatccgttacagatgtagagacctccagttgcat
gtgcacaaacccgagcttccagaactctgtcgtaaacacgtctttagtatttctggtatc
attcatcacagagctttagattgtgactgtgatttaactggttccttgagttttgaatgt
gacccagttggtgggcagtgtcagtgtaagccacatgtggttggtaggcgatgtgaccag
tgtgcccctggaacatttggctttggtccaaatggatgcacaccttgcaactgtcatgcc
attggatctcgagacaatttctgtgacattgagactggccagtgtttgtgtatacctaat
gtccacagacgtatctgtgaggaatgcgagcctggatactatgggttcccgtactgtcgc
caatgtgaatgtaatggtaacgcggatatctgtgacaaccttactggacagtgcgactgt
agagataacactacaggtcacaactgcgaaaggtgcatagatggttactatggtgatcca
cgtattgattaccgtgttccttgtaaagcttgtatgtgtccagggggaccagaccaccca
gcccagcatgcagacacctgttactatgatcctcggctagaatatgttgtatgcaactgt
gatataggttacagaggaccagactgtggcacatgtgatgacaattactttggcaaccca
tctgagataggaggtacctgtgatacgtgtgactgtaacgataacattgacccagacgat
gtcggcaactgcgacggagaaacaggcgaatgtctcaagtgtttgttcaacacagagggt
tttaactgtgagaagtgtatgccaggttactatggtgacgctctcattcagaactgtatc
gagtgtatctgtaacccaatcggaacagatccaaatggtggagagtgtgaccgcatcact
ggtcagtgtccctgtctccctaatgtgattgggcagaaatgtgacatgtctgcccccgga
cattacaacatgaccccgggtcggggtagtgagccatgtaactgtgacccagacggagct
tttggcatagaatgtaatgagctgactggtcagtgtgactgtaaaccagaccgaggagga
cgtacctgtagtgaatgccgtgacttgtattggggagatccaaatgaagagtgctatgct
tgtgattgtgacaatcaggggtcagccacacagcagtgtgatcgtcgtactggacagtgt
gtatgtctgctcggtatcagcggctacaagtgtgaccgatgtgacagaggtaccacggga
gaactacccaattgtgtaccttgtggagactgcttcgataactgggacagaatcattaga
gatcttagaggtcagacagaagtattgattgagcagggcagaaatattcagatagagggc
gccgctggtgccttcgacaaggagttccgagtaatggaagataatcttgcagagatcaag
agaatcattgaaaatgctggtgtttcctcgtatgatgtggaggaacttgaaaatatgctc
aaacaaatcagggagaatattactgacaatgtagaaaatttgaacactatggatgaagag
ttacagacgacaatgggacgcatccaggcaggcaacaatcgtatcgcagctctgcagctc
ggagtaaaggatctcaacactaaagctcaacagctgaggagaaacgccagcgatatacag
gctcaagatgttgagggtgcctttaatatcacaaaagaggccgagcgaagatcccaggag
gcccagatgatggtagatggaactaataaatatctacaagactctcaagatgttagagag
agagttgaaaggatgctcgaaaccaacatggaagattttaacaaaagtttggaagacaac
caaaatgccttgaaggaactagatatggatgtaatggaactcagtggcaaaatcacagat
attaataccatggtgtgtgatggtactggagatccctgtgacgatgtctgtggtggtggt
gggtgtggggtgtgcggaggacctagctgtgagaagggggctgttaccaaggctgacaat
gcccttgaccttgcaatgaaagcagaagccttactaaaggtcaaagaagagaatgcccaa
ggattacatgccaatgtaactgctgcccatgacttgtcccagatggcaaaggcagaagca
cagatggcatttgacgaggccgctaaagctcgcagtgtatccgaggatacaaggacaaac
ctagagcaacttctgaatgagataagagatttcctgaggactgagggagctacacctcaa
caaattgaactgatggcacaagaagtgctagcaatgagtatctccctgaaacccaatcag
attatccagttagccaatgagatcaacaacacgattcagggattacagaatatagaggat
atactcgatgatacacgtgataatcttactctcgctcagcaactcaaggaacgagcggat
aatgcatcgaagtcagcggcagctatattggacacggctcagggagtgttgaaagcactg
aatggatcgagagaggcccagaacaaagcaagacaggctatagacaaggcagacacggat
atcaataatgctcagacagaccttacacagattgagtcggagactgcagctgccgaagat
aagtccacggagacgtcggataaggttgacaagcttaaaacaaacctcgaggacctgcaa
agtaaaattaacgagaatgagttcagagttcagaatgctgaacaattagctaatgatgct
gaagacctggccaaaaaagctgaaaaggatgccaatgacctggaagacagatacccagat
gtactcaacaggttgaatgataaatataactctacagcagatgccaagggtagggttgag
aaattacgagacagggctaataaactggctacagataccacagctaaactacaaaaactg
caaaatatgaatgcagaatttgaaggctacgagaagcaactgaccagtttgtcagatcaa
atagataaactgaacgaagatatgacgggatatttagctgttatacaacagaaagccaat
gattatagaacatgtactacatag
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integrated database retrieval system