Mercenaria mercenaria (northern quahog): 123530075
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Entry
123530075 CDS
T07835
Name
(RefSeq) stabilin-2-like isoform X1
KO
K19013
stabilin-2
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123530075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mmer00536
]
123530075
Glycosaminoglycan binding proteins [BR:
mmer00536
]
Hyaluronan
Cell surface receptors
123530075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
EGF_Teneurin
cEGF
EGF
FXa_inhibition
EGF_2
Motif
Other DBs
NCBI-GeneID:
123530075
NCBI-ProteinID:
XP_053377007
LinkDB
All DBs
Position
13:5020621..5423454
Genome browser
AA seq
1700 aa
AA seq
DB search
MTLLGKMLACIFFILINVITVKGSEIGFCRETVEKIFETDCTSCHINVFIDCPVGAKKLT
KMGGTSGCTYEKHLGPGPNITMDGCTHTCEQNITTDQCCKGFWGPKCDECPGGYNTVCSG
HGACSDLIDGTGQCTCEAGRTGYACEFCTNSSVGGENCTQATVDGLCTDVICPNNSKCVV
IDGDAVCMCNTSGNTSQVCKEFDACMESPMCHADASCVLSDTKDISGLGKNCTCNSGFQG
DGYQCDPIDPCQVNNGGCDLDTSVCNYVKPGKGECMCKDGYENHVLDEGCSLLDVCALNT
SACHPKALCETVAPNEIRCTCNEGYQGDGRVCYGNILQTIEDLDESDSDLKGQMTLIKGA
IEKYYKTELTQHAAFTMFVPTNEGFRTINTADYQEWLNNKVRVRQILRQHIVVGQFTTEK
LVNHTVFHTLQGTPAELMVAWRSDILKFRLLGSSKKAKIVRGNIVAANGIIHIVNKLLTN
SPYSIGSEEKTVYENIKKDGKYNRFETLVERAGSEIKDIIMSQNVTAFVPNNAAFDSLPI
GALDFLTSDQGKGHLIALLKNHIFENIIEITDLINTRRITSLAKISSWVAVTLTGQVQLN
AGINITQTDIAASNGLIHDIDDVLVTDDISILPNNCDLITYKEVMGPCDDCRVKGRCFPP
DVELNTTVECQYYAKNSKGKYVRMSGCALMCNRTYTTPKCCDGFYGFDCLPCPGGHENVC
NGRGKCDEGYFGKGTCACDGNFGGDACDTCADNKHFGPNCTQECTCMQGVCNSGLEGDGK
CKYPCNPLYMGENCDIQAAVCNDELHQCHVHAKCIWIEKDLSFRCICLPGYSGSGQTCTE
IDPCKEAYTGGCHLQASCVKTGPGTANCTCNKGWTGDGKHCHMETVCTNHVDCHKYAKCI
PTTPGKHICVCKDDFIGNGTYCLYKDRCEVNNGGCHPLAKCSHDDRSEVYVNCTCPIELG
YSGNGFSCHGNIIMEIENHPKLTVAANLLKQMKSADQQLLLDNNYTIFISSDEGMRNLSL
PSHKFAHWIKPENMIQLLNYHTLLGSYTLDKLVAESGIKKLQTMADGFSIYITKGEDGNV
RLLPQRTGTVATVIESDIIATNGYINIIDKGLEPYEPMSPEDYPDLETFFSNHSEYSIFA
GWLKDKNITYKLENLMDSYTLFIPNNEVAKTINRTVTTDYLRYYIVPALHMMASAEDGDT
EVTDLGMDHQLVISFKAWNKYAVNGVPILKADMFTYGGLVNEIGGLLHPVIQTCDEKNST
VDFGPCTVCQPGLVYPCIDEDAVAVPDKGPFDCMYTENVVFGRVKKKKGCQGLCVTQTLI
KGCCSGYYGKECQECPSGPEFPCSGHGTCSDGIRGDGSCQCDPKFKGEQCDTCIEGWAGV
NCDIDKTSCSFKNGGCHKHADCYRGSGGKISCTCWDGFKGDGYNCSGPCDIDNGGCHINA
TCQYSNKDNLRCVCKEGLVGDGRSSCMSDILSSLVLVPQTTWFLKSLQKMSNKTLLSNLK
SSTSVDQFTLFVPVDKGLQMKMLPETSVLQQIVVFKGASQLTVLSPVDFSNITMTTLSNQ
TVTVSFNITAQSFFVNGTKILSGNIEFTNGIVHVVAKPFTQPTLESESGGSMSVGTILGP
LAALVVIAVVVVGVILYRRSQVGYWRILQTWIAKRKDSEVASHETPLHVDNDDDGGASVS
GLPHRDSSFGNPLYQSEDLE
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgaccttattaggaaaaatgttggcatgtattttttttattttgataaatgtgataaca
gtaaaggggagtgaaattggattttgccgcgaaacagtagaaaagatttttgaaactgat
tgtacatcttgtcatatcaacgtgtttattgactgtccagtcggagccaaaaagttaaca
aagatgggaggaacatctggttgcacatatgaaaagcacctgggaccaggaccaaatata
acgatggatgggtgtacccacacttgcgaacagaatattactactgaccagtgctgcaaa
ggattctggggaccaaaatgtgatgaatgtccaggaggttacaatacagtatgcagtgga
catggggcgtgttctgacctcattgatggtacaggtcaatgcacatgtgaggctggtaga
acaggttatgcttgtgaattttgtacaaacagctctgttggaggtgaaaactgtacccaa
gcaactgtagatgggttatgtacggatgttatatgtcccaacaattcaaaatgtgttgta
atagatggtgatgctgtgtgtatgtgtaacacatctggaaacacaagccaagtgtgtaaa
gagtttgatgcgtgtatggagtcgccaatgtgccatgctgatgcttcgtgtgtcttgtct
gacaccaaggacatttctggactggggaaaaattgtacatgtaacagtggtttccagggt
gatgggtatcagtgtgaccctattgacccctgccaagtcaacaatggaggttgcgacctt
gacacttcagtctgtaattatgtaaaacctggaaagggtgaatgtatgtgtaaagatgga
tatgaaaatcatgtgcttgatgaaggatgttctctcttagatgtgtgtgcactgaataca
tctgcctgccatcctaaagcactgtgtgaaactgttgctccaaatgaaatcaggtgtaca
tgtaatgaaggttatcaaggagatgggcgtgtctgttatggaaacatcttacagacaatc
gaggatttggatgagagtgattctgaccttaaaggacagatgactttgattaagggtgct
atagagaagtactataagacagaacttacccaacatgcagcattcacaatgtttgttcca
accaatgagggattccgtaccataaataccgcagattatcaggagtggttaaataacaaa
gtgagagtgagacagatattgcgtcaacacattgtagtgggtcagtttaccacagaaaaa
cttgtgaatcatacagtattccacacactccagggtacacctgctgaacttatggttgct
tggaggagtgatatattgaagttccgccttttggggagcagtaaaaaggcaaagatagtg
agaggcaacattgttgcagccaatggtatcatacatattgtgaacaaactgttgacaaac
tccccttatagtattgggagtgaagagaaaactgtgtatgaaaatattaagaaagatgga
aaatacaaccgatttgagacacttgtagagagagcaggttcagaaataaaagacataatc
atgtctcagaatgtaactgcctttgtacctaacaatgctgcatttgattcattaccgata
ggagcgcttgattttcttacgtcagatcagggaaaaggacacctgatagctctgctgaag
aaccatatatttgagaatattattgaaattacagatctgatcaatacacggagaatcacg
tcgctggcaaagatttcaagttgggttgctgtaacattgacaggacaagttcagcttaat
gctgggataaacattactcagacagatatagcagctagcaatggtctgatacatgatata
gacgatgtccttgtgactgacgatatttccatcctaccaaataattgtgatctaattaca
tacaaagaggtcatgggaccgtgtgatgattgtcgagtgaaaggtagatgttttccaccg
gatgtagaattgaacactacagtagaatgtcagtactatgccaaaaattctaagggaaaa
tatgtgaggatgtctggttgtgcccttatgtgtaacagaacctacacaacaccgaagtgt
tgtgatggattttatggttttgattgtctcccttgtcctggtggccatgaaaatgtttgc
aatggacggggaaagtgtgatgaggggtactttggaaaagggacttgtgcctgtgatggt
aattttggaggtgatgcctgtgacacttgtgcagataacaaacattttggtccaaactgc
actcaagaatgtacatgtatgcaaggcgtttgtaactctggtcttgaaggtgatggtaaa
tgtaaatacccatgtaaccctctgtatatgggagaaaactgtgatatacaagcagctgta
tgtaatgatgagctacaccaatgtcatgttcatgccaagtgtatctggatagagaaagat
ctcagttttaggtgtatctgtctgccaggttattctggcagtggacagacttgcacagaa
attgatccctgtaaagaagcatacacgggaggctgtcacctgcaggcatcttgtgtgaag
acaggtccaggaactgctaactgtacatgcaataaagggtggactggtgatggaaaacac
tgtcacatggaaaccgtgtgtaccaaccatgtcgattgtcataaatacgctaaatgtatt
ccaactactccaggaaaacatatttgtgtatgtaaagatgacttcattggcaatggaact
tactgtttgtacaaagatagatgtgaggtgaacaatggtggttgccatcccctggcaaaa
tgcagtcatgatgatcgttctgaagtttatgttaattgtacctgccccatagagcttgga
tacagcggtaacggtttcagttgccatggcaacattataatggaaatagaaaatcatcct
aaattgacagttgctgcaaatttacttaagcaaatgaagagtgcggaccaacagctgttg
ctagacaataactacactatatttatctcgtctgatgaaggcatgagaaatttaagttta
cccagtcacaagtttgctcactggataaaacccgagaacatgattcagctactcaattat
cacactttgttgggttcctataccctggataaactggttgcagaatcaggcatcaaaaag
ttacagacaatggctgatggcttctccatctatataacgaaaggggaggatgggaatgtg
agacttctaccacagagaactggaactgttgccacggtgatagaatctgatatcatagct
accaatggatatatcaacattattgataaggggttagagccctatgaacctatgtcacct
gaggactacccagatttggaaacctttttcagtaatcactctgagtacagtatctttgct
ggatggctaaaggacaagaatattacatacaagcttgaaaacttgatggattcttacaca
ctctttatccccaataatgaagtagctaaaacaattaacagaacagtgacaacagactat
ctacgttactatatagtaccagctcttcacatgatggcatcagctgaagatggggatact
gaggtcactgatcttggaatggatcatcagcttgtcatcagctttaaagcatggaataag
tatgcagttaatggtgttcctatactaaaggctgacatgtttacatatggaggacttgtg
aatgaaattggaggtttgttacacccagtcatacaaacctgtgatgagaaaaatagtaca
gttgacttcggaccatgtacagtgtgtcagccaggattggtatacccatgtatcgatgaa
gatgctgtggctgtaccagacaagggaccgtttgactgtatgtatacagagaatgttgta
tttggaagggttaaaaagaagaaaggctgccaaggactctgtgtaacacaaacactgatt
aaaggttgctgctcagggtattatgggaaagaatgtcaggagtgtccgagtggtccagag
tttccatgcagcggacatggtacatgcagtgatggtatccgtggtgatggttcctgtcag
tgtgaccctaaattcaaaggtgaacaatgtgacacttgtattgaaggttgggcaggagtg
aactgtgatattgataagactagttgtagctttaaaaatggtggatgtcataaacatgcg
gactgttaccgtggtagcggtggtaaaatatcctgtacatgctgggacggtttcaaggga
gatggatacaactgcagtggaccttgtgatattgataatgggggttgccatattaatgca
acctgtcagtatagtaacaaggataatttgagatgtgtatgcaaagagggtctggttggt
gatggaagaagtagttgtatgagtgacatcttgtcctctcttgttttggtaccccagaca
acctggtttctcaagagcctccagaagatgtcaaataagacattgctaagcaacctgaag
tcttcaacatctgttgaccaattcacattgtttgttcctgtagataaaggcttacagatg
aagatgttaccagagacatcagtgttacaacagatagttgtttttaaaggtgccagtcag
ctgacagttcttagtccagtggacttctcaaatatcaccatgacaacgctgtccaatcaa
actgtgactgtctcattcaatataacagcccagagtttctttgtgaatggaaccaaaatt
ctaagtggaaatattgaatttactaatggaattgtgcacgtagtagcaaaaccgtttaca
cagccaactttagagtctgagtcaggtggaagcatgtctgttggaacaattcttggtcct
ctagctgctctcgttgtcatagcagtagttgttgttggggttattttgtatagaaggtca
caggtgggatactggagaattttacagacctggatagcaaagagaaaggattcagaagta
gctagtcatgaaacaccacttcatgtagataatgacgatgatggaggtgcctcagttagt
ggtttaccacacagagattctagttttggcaatccactgtatcaatcagaggatctggaa
tag
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