Mercenaria mercenaria (northern quahog): 123530424
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Entry
123530424 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123530424 isoform X1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
zf-CCCH
SGF29_Tudor
Torus
Agenet
CATRA-C
zf-CCCH_4
Tudor_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
123530424
NCBI-ProteinID:
XP_053377526
LinkDB
All DBs
Position
13:36226462..36358936
Genome browser
AA seq
1484 aa
AA seq
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MSAKQRHKQRVIQRLKEKLENLKSIEENLHTVVREHVLKAEKRCLEVLRLEDTSQFLQQY
GKVEQLLDAAFNLVEVLTSSAEDMIENVDSNVPDEDVFTTDRSIHSSTHIPSDDKLETNR
NVHERNAKTVARQLSDKDIERELQEMIQSSSRKRHGSSEAASQTVPEEVSLYNEQTGLQH
CDRMYHVSQSTGVNQMKQSIISDTVSERGQSVSSSDNTDENKVLNKEKDFYETCVKKDSK
VLGKQIGNNINETSVGKSKKLQPNNSGSKSAGKTKTDKGVPKNVRKHLNKEPSQDTDGSS
SSQVDSVTFNQDVILASSPKRNTANPKKKKSPKKKAGKSNIDSLIEPHLDKDQSNKASSE
RHEDVKLIDKDVSKAKQGIGKYSESEQSMRNRNVLKGEQGEISSEPTITSSEQSILEHEL
TEMRATESSETSTSSDLRSLLKDGQAIHTLQVGSGVNSQKELHPSQKYQLEAVENSAAVS
KSRLEEISDKSDNTAGKEDSAQLKVKDTTDNSGKKGDSTSTEVLTAGNLLVGKITPIIVS
EVVSPWCFFVQKNGPQLSQLMEQICIYMAQGGLQKQALLEPEIGTLCLAKYTKDSSFYRA
YVTQIYRAIQTHNSEVDVLYVDYGNRERVKVTQLRTLPEKFKALPTQAICCALAEVMPCN
KYCVWAEDDIHVFRQYVTGQQLSCTPPTCRSSGVSLPLLVELIVSLPVPTIPQGGIYLSQ
FSIAQLMINAKKARHVEVTEQLGLLAKSGEGAEEAAILSHDMTTPSRLAIMELSESQCDT
PQKMDKLVKNKDLEEDANQEQGQPKVEQLNLNKETDMTSTDVTSSGYTSKQVRTDLISPR
SENSDTESQRDEGHKGSSKIPEKGQSVTQGSGSRGQLDKIKEETVELEYCETSSTTTSLT
TDIDFPPEKGIHLADLHFDLDDLYFNPQGQEVMLAHVRSPDEFFVHIISQQSGETLDRLM
KNLNSLFENVNRRKLTKLSKTFEPEEKKLCCAQFLQDNNFYRGIIRNTKPEKEIMKGRIL
VHYIDFGDEEWLPKRRIFPLPPQFCSVPRLAVKCSLAYIKPVCAEGEEPDRWSKTSLEKF
IDIAGLEKTLHMHVVHGSLEDFKKGNPCEDSPVLGILLVDNTGTEEVCINMDLIREGVAQ
LDTSQAKHEKDNTQEMSPDTRLEKWNPMEEDFLSKRNSYKIDIDDAGVATTGYKAKDEER
LCKFFSTGRDCWRGERCPFRHIHVESGITYDQEPVYAISDNQRDFLPQTGSWVAIEISTI
LSPSHFYAILPLGSKSLDATCSEPEKPDTGAFGVSGSEETLDDLLDALNTEYKKRPAHDG
SLLLRAIGEIVVARFSLDQSWYRARIIEVTEEKVKVFFVDFGNTEWLPEEEVTDIKPEFL
HLPFQAVECFMNVEPKANEKWTKDARVVFRELVDGKTLVGHIKSRSWNGCLWVELYDTST
EEDVNVGEELVERGHALKGESQESHTDYSSNISPASGDPLLVPG
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaagcagcgtcataagcagagagtgatacagaggttaaaggagaagcttgaa
aacctgaagtcaatagaggagaacctgcacactgttgtcagagaacatgtgttaaaagca
gagaaaagatgtcttgaagtgttaagactggaggatacaagtcagttcctgcagcagtat
ggcaaagtggagcagttgttagatgctgcattcaacttggtggaagtgctcacttcttct
gctgaggacatgatagaaaacgttgatagcaatgtcccagatgaagatgttttcaccaca
gacagatctatccactcatccacacacattccctctgatgacaagctagaaacaaacaga
aatgttcatgagagaaatgcaaagaccgtagcaagacagctctcagataaagacattgaa
agagaacttcaagaaatgattcagagttccagtaggaaaagacatggcagttctgaagct
gcaagtcaaacagttccagaggaagtgtccttatataatgaacagactggtttacagcat
tgtgacagaatgtatcatgtctcacagtctacaggtgttaaccaaatgaaacaatccatc
atcagtgacacagtctctgagaggggtcagtctgttagcagctcagataatacagatgaa
aataaagtactaaataaagaaaaagatttctatgagacttgtgttaagaaagatagtaaa
gtgcttggaaaacagataggtaataacataaatgaaacaagtgttggaaagagtaagaaa
ttgcagccgaacaacagtggttcaaaaagtgccgggaaaactaaaactgataaaggagta
cctaagaatgtgagaaaacatttaaataaagaacccagtcaggatacggatgggtcaagt
tctagtcaggtagattcagtgacattcaatcaagatgtgattctagcaagtagtccaaaa
agaaatacagctaatcccaaaaagaaaaagtcgccaaagaagaaagctggaaagtcaaac
atagacagtctgattgaacctcatttagacaaagatcaatcaaataaagcttcatcagaa
agacatgaggatgttaaactcattgataaagatgtttctaaagcaaaacaagggatcgga
aaatattctgaaagtgaacaaagtatgaggaacaggaatgtattgaagggtgagcagggt
gagatttcaagtgaaccaaccattacatcatcagaacaaagtatcttagaacatgaacta
acagaaatgagagccactgaaagtagtgaaacatctactagttcagatctgagaagttta
ttgaaggatggccaagcaattcatactttgcaagttggaagtggagtaaatagtcaaaag
gaattgcatcctagtcagaaatatcagctggaggctgtagaaaatagtgcagctgtaagt
aaaagcagactagaagaaatcagtgataaatctgacaatactgctggcaaggaagattca
gcacaattaaaagttaaagataccacagacaattctggaaaaaagggagacagtacaagt
actgaggtattgactgctggtaatctgttggtagggaagataactcctattattgtaagt
gaggttgtctccccctggtgtttctttgtgcagaagaatggaccccagctgagtcagcta
atggaacaaatatgcatttatatggcacaagggggtctccagaagcaggcattactggaa
ccagaaataggaaccttgtgcctggctaaatataccaaagactcttctttctacagagca
tacgtcacccagatatacagggctatacagacgcataattcggaggtagatgtgctgtat
gtagattatggaaacagagaaagggtgaaggtcactcaactacgaacattaccagagaag
ttcaaggccctgccaacacaagcaatatgttgtgctcttgctgaggtgatgccgtgtaac
aagtactgtgtatgggcagaagatgacattcatgtgtttagacaatatgttaccgggcag
cagctgagttgtaccccacccacatgtagaagtagtggtgtgagtctgccattgttggtt
gagttgattgtgagtcttccggtgccaaccatacctcaaggtggcatttacctcagtcag
tttagtatagctcagttaatgatcaatgcaaagaaagcaagacatgttgaagtcaccgag
cagcttggattgttggcgaagtctggtgaaggtgctgaagaggcggccattttatctcat
gatatgactaccccatcgagactggcaataatggaactgagtgaaagtcagtgtgatact
ccgcaaaaaatggacaaacttgtcaaaaataaagacttggaagaggatgcaaatcaagaa
cagggccaaccgaaggtagaacagttaaatttgaacaaagagacagatatgacatctaca
gatgtgactagttcagggtatacaagtaagcaagtgagaacagatctgatttctcctagg
tcagaaaattctgatactgaatcgcagagagatgagggacataaagggtcaagtaaaata
ccagaaaagggccagagtgttacacaaggatctggaagccgaggacaattggacaagatt
aaggaggaaacagtggagttagaatattgtgaaacatcttctacaaccaccagccttaca
actgacattgatttccctcctgagaaaggtatccatttagctgaccttcactttgacctt
gatgacctttacttcaatcctcaaggtcaggaggtcatgctggcccatgtgaggtcacca
gatgagttctttgtgcacataatttcacagcaaagtggagagactctggaccgattgatg
aagaatctgaatagtttgtttgagaacgtaaacagaaggaagcttacaaaactcagtaaa
acatttgaaccagaagaaaagaaactgtgctgtgctcagttccttcaggacaataacttt
tacagaggaattatccgtaatactaaaccagagaaagaaattatgaagggacggattctg
gtacactacatagacttcggagatgaagaatggctgcctaaaaggagaatttttcctcta
ccacctcagttctgcagtgtccctagattggctgtcaaatgtagccttgcttacataaaa
ccagtctgtgcagaaggtgaggaaccagacagatggtctaagacaagtttagagaagttt
attgacattgctgggcttgagaaaactctacatatgcatgttgtacatggaagtctagag
gattttaaaaaaggcaacccatgtgaagactctccagttcttggcattcttttggtagac
aatacaggaacagaggaggtgtgtatcaatatggacttgatcagagaaggtgtagcccag
ctagatacttcccaggctaaacatgagaaggacaacacacaagagatgtctcccgatact
agactggagaagtggaacccaatggaggaggattttctctctaaaagaaacagttacaag
atagatattgatgatgctggagttgcaacaacaggatataaggctaaagatgaagaaagg
ctttgcaagtttttcagtacaggcagagattgttggagaggggaaaggtgtccatttaga
catatccatgttgaatcaggtattacttatgaccaagagccagtgtatgcaatcagtgac
aatcaaagagattttctacctcaaacaggaagttgggttgccatagagatatctacaatc
ttgtcacctagccatttctatgcaattctacccctagggagtaagtcactagatgccaca
tgtagcgagccagagaaaccagacacaggtgcgtttggtgtatcaggaagtgaagaaacg
ctagacgacctgctggatgctctcaatactgagtacaagaagcggcctgctcatgatggg
agtctgttgttgagagcaattggtgaaattgttgtcgctagattttccttagaccagagc
tggtaccgggcacgtatcattgaagtcacagaagaaaaggtcaaggtgttttttgttgat
ttcggaaacacagaatggttaccagaggaggaggttactgacataaaaccagaattccta
catctaccattccaggcagtagagtgttttatgaatgttgaacccaaagctaatgagaaa
tggacaaaagatgcaagggttgtgttcagagagttggttgatgggaagacattagttgga
catattaaatcaaggtcatggaatggatgtctgtgggtggagctgtatgatacctctact
gaagaagatgtcaatgtaggggaggagcttgtagaacgaggtcatgctttaaagggggag
tcacaagaatcccatactgattattcaagcaacatcagtcctgcttctggagacccgtta
ctggttcctggctaa
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