Mercenaria mercenaria (northern quahog): 123530778
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Entry
123530778 CDS
T07835
Name
(RefSeq) bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN-like
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmer03032
]
123530778
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123530778
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
123530778
DNA replication proteins [BR:
mmer03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
123530778
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
123530778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
Sigma70_r4_2
DUF2540
Motif
Other DBs
NCBI-GeneID:
123530778
NCBI-ProteinID:
XP_053374629
LinkDB
All DBs
Position
11:complement(17061578..17169762)
Genome browser
AA seq
1236 aa
AA seq
DB search
MARNVAQTVELLKESVDCLHGTCISLTNTDKGQISDELGEDCIAKAAEQINQIHEKILNI
QLQERTKVGVSKERVSKEIEAIEITRKELKRLKVKLRQSLNGDETDSDNDVIVCITPLES
LTRNAVFDKKSISEDDSDVTVDLDKDEDQSSEVVNSNTKHDDSKDMFDTSNMSGDYSNTN
NNMKKVVENEEDWDSDNTDDLENFDNFDLDDVVSSTPGKLEGINPDASKAKQETENTKIK
QIKQVESVVENTLDDADDLFEDDDFGDDDFNDDVLQELDAAEKSYTDNCDSTPPDVEIIE
NDDDEENQPQDKKYLQVLKQYFGYSKFRPMQWKILHSVMLEKRDNCVIMATGYGKSLCYQ
FPSLMSQKTTVVISPLISLMQDQVLGLQAANIPSCYLGSAQENKTEVKENLFRGEYRVLY
ITPEFAAVATDILGNLNNKVGIDLIAIDEAHCVSQWGHDFRDSYRKLGQLRSFFPNVPIM
ALTATATPEVRLDICKSLRLKNPVITCTGFDRPNLFLSVSMKSGDIAHDLKSQMEVKGNK
YTFCGPTIIYCPTKKITETVSHVVKGMGVPCLPYHAGLTPKARKEAHKRFVNDDILVVVA
TVAFGMGIDKPDCRKVIHYGAPKDIESYYQEVGRAGRDGLPSFCHTFYSNTDFNTTRYLL
KDIHNVKFKQHKLNMLSKMQQYLGAATCRRRILLSHFDNKNLEQVGGTANCCDNCTKIVE
IGRQKSYYDSKNWSSVVGGIASRTEPVDYRKEAKDFFTVAEAIHGGFGLNNTVLILTGSS
SQKIKKFASYKVFGLGKYKKISWWKAFGKCLIDEGYLEERACGQGIFGSTIQTSGKARDW
MDNGGRTGSKPLKFIPNTELAAEDKPAVAVSFRPNVPAAREKPSPSRPELKKTFSSPLPK
PGLVKDPYSEIQNAKYTPKKVVVDEKTAKLESDLYTKLIRQRNELAHQTGYTPHSIASNK
VLLDMAKVRPSTRAGLLKLEDFPEAKVEKFGAPLLEVITNFCKDNDLKMDNFPESLFDTD
KSTRDLQSEIYSLTETQRNSYIMFAVHNNSLEEVASKRGLKTSTVMSHMAEAVKVGLPVD
VQALGVTSHIQQLVTNAIRGDVIKSDITRLTKIKDVLPDYIEYNHIKIVIALLVRQYGQI
VNPEGEIILQGSQSSKDNGQIDLTDSAEWSQTGTSQDESQNHSTGGRYTTGTKSQSGVTQ
SSTSSGGTKRKLPSWMSSGGNKPVMTKKMKSNSLFR
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggctaggaatgtcgcacagactgtggaactgttaaaagaaagtgttgactgtcttcat
ggtacctgtatctcgttaacaaatactgataaaggccagatcagtgacgaattaggtgaa
gactgtattgcaaaagcagcagaacagattaatcaaatacacgagaagattcttaatata
cagcttcaggaaaggaccaaagttggggtatcaaaggagagggtatccaaagaaatagaa
gcaatcgaaattactaggaaagaattaaagaggcttaaagtaaagctcagacagagttta
aatggtgatgaaacagattctgataatgatgttattgtatgtataacaccattggaaagt
ttgacaagaaatgcagtttttgacaaaaaatcaatcagtgaagatgactcagatgttact
gttgaccttgataaagatgaagatcaaagttcagaagttgtaaacagtaacacaaagcat
gatgattcaaaagatatgtttgatacgtctaacatgtccggtgattattcgaacacaaat
aacaatatgaaaaaagttgttgaaaatgaggaagactgggattcggacaatacagatgac
cttgaaaactttgataactttgatcttgatgatgttgtcagttctactcctggtaaattg
gaagggataaatcctgatgcatctaaagcaaagcaagagacagaaaataccaaaatcaag
cagatcaagcaagttgagtcagttgttgaaaacacattggatgatgctgatgatttattt
gaggatgatgattttggagatgatgattttaacgatgacgtgcttcaggagctggatgcg
gcggaaaaaagttacacagataattgtgacagtactccaccagatgttgagatcatagaa
aatgatgatgatgaggaaaatcagccacaagataagaaatacttgcaagttctaaaacag
tactttggatactcaaagtttagaccgatgcagtggaaaatattacactcagtgatgctg
gagaagagagataattgtgttatcatggcaacaggttatgggaaaagtttatgttaccag
tttccatcattgatgtcacagaaaacaacagtggtaatctcccctctcatatctctgatg
caggaccaggtgcttggtttacaggcagctaacataccttcttgttacctgggatctgca
caggaaaataaaacagaggtgaaggaaaacttattcaggggagaatatcgtgtgttgtat
ataacaccagaatttgcagctgttgccacagacatcctaggtaacctaaacaataaagtt
gggatagacttgattgctattgatgaggcacattgtgtttcacagtggggacacgacttc
agagactcatacaggaaactaggccaactgcgatcattttttcctaatgttccaataatg
gctctgacagccacagctacccctgaagtcaggctagatatctgcaagagtctacgtctg
aagaatccagtaattacatgcacgggttttgatagacctaatttatttctgtctgtgagt
atgaagagtggagatattgcacatgatctcaaatctcagatggaagtcaaaggcaacaaa
tataccttctgtggtccaaccatcatttactgccctacaaagaaaatcacagagacagtt
tcacatgttgttaaaggaatgggagtgccatgtttaccttaccatgctggtttgacacct
aaagctaggaaagaggctcataagagatttgtgaatgatgatatactggttgttgtggca
actgtagcttttggtatgggtatagataaaccagattgtagaaaagtgatacattacgga
gcgccaaaagacattgagtcatactatcaagaagtgggtagagcagggagagacggactt
cctagtttctgtcatacattttattctaacactgactttaatactaccagatacctgctg
aaggacattcacaatgtaaagttcaagcagcacaaattgaacatgttgtctaagatgcaa
cagtatctaggagctgctacatgcagacggaggattctattatcccattttgacaacaag
aatttggaacaagttggaggaactgccaactgttgtgataactgcacaaagatagttgag
ataggaagacagaagagttactatgactccaagaactggtcatctgttgtgggtggtata
gcatcaagaacagaaccagttgactacaggaaggaagctaaagatttctttactgttgcg
gaggcaatacatggaggatttgggttaaacaacacagttcttattctgacaggatcaagc
agtcaaaaaataaagaagtttgccagttataaagtgttcggtcttggaaaatacaagaaa
atcagctggtggaaagcatttggcaagtgtctgatagatgaagggtacttggaggagagg
gcatgtggccagggaatttttggttcaaccattcaaacttcaggaaaagctagggactgg
atggacaatggtggtaggactggcagcaaacctctgaagtttataccaaacactgaacta
gctgcagaagacaaaccagctgttgcagtgtcatttaggccaaatgtgccagcagcaagg
gaaaagccatctccaagcagaccagagctgaagaagactttttccagtcctttaccaaag
cctggattggtaaaagatccatattctgaaatacagaatgccaagtatactcctaaaaaa
gttgttgttgatgagaaaacggcaaaattagagtctgatctgtatacgaagttgatacga
cagagaaatgagctggcacatcagacaggatatactccacattctatagctagtaataaa
gtacttctggacatggctaaagtcagaccaagtactagagctggtttgttgaagttggaa
gactttccggaggctaaagttgaaaagtttggggctccgttgctggaagttattactaac
ttttgtaaggacaatgatcttaagatggacaactttcctgaatcattgtttgacactgat
aagtctactcgtgacctgcagtctgagatctacagtctgacagaaacacagaggaactct
tacataatgtttgctgttcacaacaattctctggaggaagttgcttcaaagagaggactg
aagactagcactgtaatgtcccacatggctgaggcggtaaaggttggtctgccagtggat
gtccaggcactgggggtgaccagtcatatacaacagcttgtgactaatgctataagagga
gatgtgattaagtcagatattacacgactaaccaagataaaggatgttcttcctgactat
atagagtacaaccatatcaagattgtgatagcattattagtgaggcagtatggccagatc
gttaatcctgaaggggagataattcttcagggaagtcagtcaagcaaggacaatggacag
attgatctcacagactcagcagagtggtcacagactggaaccagtcaagacgaatctcag
aaccattctacaggaggtagatatactactggtaccaagtcgcagtctggggttacacag
tccagtacatccagtggaggaacaaaaagaaaacttcctagctggatgtcgtcaggtgga
aataaaccagtgatgactaaaaaaatgaaatctaacagtttgttcagatag
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