Mercenaria mercenaria (northern quahog): 123530824
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Entry
123530824 CDS
T07835
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmer03036
]
123530824
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123530824
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HARP
Helicase_C
ResIII
DEAD
zf-CCCH_UNK-like_4th
Motif
Other DBs
NCBI-GeneID:
123530824
NCBI-ProteinID:
XP_053374731
LinkDB
All DBs
Position
11:27083649..27126969
Genome browser
AA seq
1038 aa
AA seq
DB search
MFSKMSGKLTEEQLRRIEENKRKALAKRAGKLHSSTNLHSVESTPVTCSNKIQDGPKLSC
GSTSDFRNQIQKVKTGIGPTPTVHGSDNAYGGAFTLKNSGNSINKTQDGLASTKGPVANI
SRTQVVVAPAAGSIRANDVMKDKGSPVVMNNVRVEHTSDLQKSSVNKTGGIVSLPEKPSV
STKLPLGSGENNYSAASSVNSNLQSKTVVSKAKINYDQIEQNRLKALAKRAEKLSKSPGK
SLNPSSNFSESNKMSEKIGDKSGTLATSFEKQQGTFQQNVLSGENSGNIKLLHKQQTLSS
AVTSNNNTSLRSVKSNLNCAGPSSRNQDTFAQSSTNSESSNSGQNIFSKFTGTPVKGGCF
LVSRDRFEVKVGYSAPLIELFKTMKTKLYDAVSKKWSFKLSEYNSFMIVVRNLHPAVDIE
PLPRAITTTFSAQIKGENPPKHAPIADLSRVEQSLVNSLMSFQREGVNYGIYKNGRVLIA
DDMGLGKTIQAICLSCYYRTEWPLLVVVPSSVRFDWAQNFLRWVPSLDPQSVNVVVTGKD
SCTSGLINILSYDLMSRKADILKKKRFQIVIMDESHLLKNYKTARCKAAIPLLQNARRVL
LLSGTPALSRPSELFTQIDAVCPFLFKFHDFGVRYCAGTKLPWGWDYSGSSNMEELQILL
EEKIMIRRLKKDVLTELPDKIRQMILLDPSSIKISKDLKSASEVMASGNLKKMEERGALL
EFFHKSGSAKMKAIKSYVEDLLDSEKKFLIFAHHGDVLDGIEETVKAKIDLNYMRIDGKT
NSEQRNFLCKKFQLNEDVKVAILSITAANAGLNLSSACLVVFAELFWNPGILVQAEDRAH
RIGQQDMVNVQYLVARGTSDDHIWPMIQNKLDVLGKAGLSKDNFSSAETTRLRDQRQEEI
TKFLEESFCDDGVVSHVADNNGIFEEEFESSPKKAFKQSSILKYTSPAKDIETFRSSSTP
PKEKKPKGLFKYFTPEKKSGSDVYNNPSENCATYSTFEGHSSRPDEKGQDDDLEKFLLDS
DEEWEGNDDGPIVKKRRT
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaaatgtctggtaaattaactgaagagcagctgagaagaatagaagaaaac
aaaagaaaagccttggcaaaaagagcgggaaagttacactcctctacaaatctacatagt
gtggagtccactccagttacctgctctaataaaatacaggatggaccaaaattatcatgt
ggttccacaagtgatttcagaaatcaaatacagaaggtgaaaactggaatagggcctact
cctactgtacatgggtcagataatgcatatggaggagcatttacattaaaaaattcagga
aatagtataaataaaacacaagacggattagcaagcacaaaaggccctgtagccaacata
agtagaacacaggtggtggtagcaccagctgcaggttcaattagagccaatgacgttatg
aaagacaagggtagccctgttgtgatgaataatgtcagagtcgaacatacttcagacttg
caaaaaagtagtgtaaataaaactggtggaattgtgtctttaccagagaaaccttctgtt
tcaacaaaacttcctttagggtccggagaaaataattacagtgctgcaagttctgttaat
agcaatttacagtctaaaactgtagtttcaaaagccaagataaattatgaccagattgaa
cagaaccggttgaaagctttagcaaaaagggccgaaaaactaagtaaaagtccaggaaaa
agtttgaatccctcatccaacttcagtgaaagtaataaaatgtcagaaaagatcggtgat
aagtccgggacacttgcgacttcttttgaaaagcagcaaggaacattccaacaaaatgta
ttatctggtgaaaattctggtaatataaaattacttcataaacagcaaactctatcttct
gctgtcaccagcaataataatacgtcgttaagaagtgttaaatcaaatctaaactgtgcc
ggtccatcttcaagaaatcaagacacttttgctcagagtagtactaacagtgaatcaagc
aactctggtcagaacatattctcaaaatttactggtaccccagtaaaaggaggctgtttc
ctggtttccagggacagatttgaggtaaaggttggatatagtgctccactcatagaactg
ttcaaaaccatgaagactaagctatatgatgctgtttcgaaaaagtggtcattcaaactg
tcggaatataacagctttatgattgttgtcagaaatcttcacccagctgtagatatagag
cctcttccaagagcaattacaactacattcagtgctcagatcaagggagagaacccacct
aaacatgcacctattgcagatctgtctagagtggaacaaagtctggttaactcactaatg
tcatttcagagggaaggggtcaattacggaatttacaagaatggtcgagtgttgattgca
gatgacatggggttgggtaaaactatccaggcaatctgtttgtcgtgttactacagaaca
gagtggcccttacttgtggtggtaccatcttccgtcagatttgactgggcacagaatttt
ctgagatgggttccctcccttgaccctcagagtgtgaatgttgttgtgacaggaaaggat
agctgtacatctggtctcatcaatatactgagttatgatctgatgtcgaggaaagcggac
atactgaaaaaaaaaagatttcaaattgttatcatggatgaatcacacttactaaagaac
tacaaaacagcaagatgtaaggctgcaattcctttattacagaatgcaaggcgtgtattg
ttgctgagtgggaccccagctctgtcacggccgtctgaacttttcacacagattgatgct
gtttgtccattcctcttcaaattccatgattttggtgtgagatactgtgcaggaactaag
ttaccatggggatgggattactctggttcctccaacatggaagagttacagatacttcta
gaggaaaaaataatgataagacgtttaaaaaaagatgtactaacagaactgccagataaa
atacgtcagatgattctgctggatccaagctctattaaaatcagtaaagatttgaaatca
gcatctgaagttatggccagtggaaacttgaagaaaatggaggagaggggagcattgttg
gaatttttccataaatcaggatctgctaagatgaaggccataaagtcatatgtggaggac
ttactggatagtgagaaaaagttcctcatctttgctcaccatggagatgtccttgacgga
atagaggaaactgtgaaggcaaaaatagatttgaactatatgcggattgatgggaagaca
aactcggaacagaggaacttcctgtgtaagaagtttcagttaaacgaggatgttaaagtt
gctattctctctattactgctgcaaatgcggggctaaatctttcatctgcttgtcttgtt
gtctttgcagaactcttctggaatccagggatactggtacaagcagaggacagagcccac
aggattggtcaacaggatatggtgaatgtccaatatcttgttgctaggggaacgtcagat
gaccatatttggcctatgatacagaataaattggatgtgcttggtaaagctggtctctca
aaggacaacttttcctctgcagaaactaccagacttagggaccagagacaagaggagata
acaaaattcctggaggagtctttctgtgatgatggagttgtttcccatgttgctgataat
aatggtatttttgaagaggaatttgaaagttcaccaaagaaagcatttaaacagtcgagc
atattgaagtatacttcaccagctaaagacatagagactttcagaagttccagtactcca
cctaaagaaaagaaaccaaaaggactttttaaatacttcaccccagagaagaaatctggc
agtgatgtctataataaccccagtgaaaattgtgctacttactctacatttgagggtcat
agttcaaggccagatgagaaaggtcaagatgatgaccttgagaaatttctgctggacagt
gatgaggagtgggagggtaatgatgatggacctattgtgaaaaagaggagaacttga
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