Mercenaria mercenaria (northern quahog): 123530998
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Entry
123530998 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123530998
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123530998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123530998
03021 Transcription machinery [BR:
mmer03021
]
123530998
Transcription factors [BR:
mmer03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
123530998
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123530998
RNA polymerase III system
TFIIIB
123530998
RNA polymerase I system
SL1/TIF-1B
123530998
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
123530998
NCBI-ProteinID:
XP_045167708
LinkDB
All DBs
Position
11:complement(54048245..54048712)
Genome browser
AA seq
155 aa
AA seq
DB search
MIITNVVYSAHLDCAIDLRRLCYRISNARYDPRTFPGLIWQHKTIGGNCLVFSNGVINCN
GKATSIQQGRQRLRRYARRIQRLGYTVCLKEIKCITVSASHTLSTTLDLNQLVKERQTVY
EPELFSAVNLKNDRVNFCCFHSGKVVITESKITLS
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgattatcaccaacgttgtgtacagtgcccatttggactgtgctattgacttgaggcgc
ttgtgttatcgtatatcaaacgctcgttacgatcctagaacattccctggactgatctgg
caacacaagaccataggaggaaattgcttagtcttctccaacggcgttatcaactgtaat
ggaaaagcgaccagtattcaacagggacgtcaaagactaagacgttatgccagacgtata
cagcgattagggtacacagtgtgtctgaaagagatcaaatgcataaccgtgtcagccagt
cacaccttaagtaccaccctagacttaaatcagttggtaaaagaaagacagaccgtgtat
gaacccgaactattttcagcggtgaatttaaaaaatgatagagtcaatttttgttgtttt
cacagtggtaaagtggtcattactgaatcaaagatcacactcagctag
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