Mercenaria mercenaria (northern quahog): 123531063
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Entry
123531063 CDS
T07835
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-1-like
KO
K06493
integrin beta 3
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03266
Virion - Herpesvirus
mmer04145
Phagosome
mmer04148
Efferocytosis
mmer04512
ECM-receptor interaction
mmer04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
123531063
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123531063
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
123531063
04148 Efferocytosis
123531063
09142 Cell motility
04820 Cytoskeleton in muscle cells
123531063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123531063
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmer04147
]
123531063
04515 Cell adhesion molecules [BR:
mmer04515
]
123531063
04090 CD molecules [BR:
mmer04090
]
123531063
Membrane trafficking [BR:
mmer04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
123531063
Exosome [BR:
mmer04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123531063
Cell adhesion molecules [BR:
mmer04515
]
Integrins
Integrin beta subunits
123531063
CD molecules [BR:
mmer04090
]
Proteins
123531063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
EGF_2
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
123531063
NCBI-ProteinID:
XP_053374133
EnsemblRapid:
LOC123531063
LinkDB
All DBs
Position
11:65700150..65731551
Genome browser
AA seq
804 aa
AA seq
DB search
MDEKIRVCFILLWILGQLSWTQANKKICNQKLWCSDCITAHQDCAWCKNKDFIGARCSTK
DDLIDNECNDEDIIFPNNTASFPQNKNLRDGSEHHDPIQLSPQHVKLTLRPGKTYSFDMK
YRVAANLPIDMYFVMDFTITMKDRITELAGLTADLIDGLREMFTKNIHIGFGSFVDKPVQ
PFSITTAQHLANPCVLQKTQCEPTYGYIHRRRLNNDVNRFINTIRNANTSANFDPMEGGL
DAVLQAAVCPDIVGWRNQSRRVXVYISDSGFHFAGDGKLAGIDKPNDCSCHMAPYKNSPE
ESIYTHSAILDYPSYGQLKKVLADNNINSFFVVEKTDKVLYKGLTDMIGGQSATETMDAE
GANAIVSSITTFFKDLSEKVVITAEDLPEELDVIAETNCSHQRIKSTYNMRELPIKCSDL
EIGKEVHINVSIVANECPKDGSRTKLFKFVPSGLQESLLLEVEFICDCECKKSEELDNEK
CTQGNGTYECGVCKCKPGRSGEFCQCDNDDSSSDLSIQEANCRKNNDSESLCEDRGVCKC
GQCICPKDYEGKYCECDNTKCIDPVSTSTEKCTNKEQGTCECGTCVCKNNYFGDFCQCPS
NANCVSQKNGKVCSGNGVCSCGKCDCKTGYNGTVCEDCPRCDNCRKCGNDAQKSCVTCLD
AHRKSDNASHTDCQEECSSLEVTMVARFQKAVQPCGTFDKDKCQINYIILCENDTIHLHL
AKTKQCVSPPDPLLIALPVLGGIIGVGLLLLIIWKILTSFYDKIEYARFEHEIQNPKWSQ
TDNPIYKTPLTSNQNPVYKGTVDD
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaaatacgtgtttgtttcattctactttggattttaggacaactttcttgg
acacaagcaaacaaaaagatctgcaatcagaagttatggtgcagcgactgtataacagcg
catcaagactgcgcttggtgtaaaaataaggattttataggagcaagatgtagcactaag
gacgatctcattgacaatgaatgtaatgatgaggacatcatctttcctaacaatacagct
tcatttccacagaacaaaaatttacgagatgggagcgagcatcatgacccgattcaactg
tcaccgcagcacgtgaaactaactcttagaccaggcaagacgtattcctttgacatgaag
taccgtgtggctgccaatctacctattgacatgtattttgtgatggatttcacaatcaca
atgaaagatcgaatcacagagctagcaggtcttacggcggatttaattgatggcctgagg
gaaatgtttacgaagaatattcacatcggatttggttcctttgttgacaaacccgttcag
ccgttcagcataactaccgctcaacatttggcaaacccatgtgttttacagaagacacaa
tgcgaacctacctacggatacattcacagaagaaggctaaataacgacgtcaatagattt
attaacactataaggaatgccaacacatctgcaaactttgatccgatggaaggagggcta
gatgccgtactacaagctgcagtgtgtccggacatcgtaggatggaggaaccagtccaga
cgggtttaagtgtacatttcagacagtggatttcattttgcgggggacggaaagctggca
gggatagacaaaccaaacgattgttcttgtcacatggcaccttacaaaaacagtccggag
gaatctatctacacacactctgctattcttgactatccatcttacggacaattgaagaag
gttctagcagataacaatattaattcattctttgttgtggaaaaaactgacaaagttttg
tacaaagggctgacagatatgatagggggtcagtctgccacagagaccatggacgccgag
ggagctaacgccattgtcagcagtataacgactttctttaaagatctgagtgagaaggta
gtcattactgctgaggatctccctgaagaacttgatgtaattgccgagacaaactgcagt
caccaacgcataaaaagtacatacaacatgagagaactaccgataaagtgcagcgatctg
gaaattggaaaggaggttcatatcaacgtgtctatagtggcgaacgaatgccctaaggat
ggaagcaggacaaagctattcaaatttgtaccatcaggacttcaggaatcactgctgtta
gaagtggaatttatctgtgattgtgaatgcaagaagtcagaggaactggataatgagaag
tgtacacagggtaacggtacttacgaatgcggagtgtgtaagtgcaaaccaggtaggagc
ggcgagttttgtcaatgtgataatgacgattcttcctctgatctcagtattcaggaagcg
aactgcagaaaaaacaacgatagtgaatcgttgtgtgaagaccgtggcgtgtgcaaatgt
ggccagtgcatctgccctaaagattacgaagggaagtactgtgaatgtgacaatacgaaa
tgtattgatccagtcagtactagtaccgaaaaatgcacaaataaggagcagggtacttgt
gaatgcggaacgtgcgtttgtaagaataactactttggtgatttttgccagtgcccgtca
aatgctaactgtgtctcacaaaaaaatggaaaagtatgcagtggcaatggagtgtgttca
tgtggtaaatgtgactgcaaaactgggtacaatggaacagtctgtgaggattgtccgcgg
tgcgacaactgccggaagtgtggaaacgatgcgcaaaagagttgcgtaacatgtctcgat
gcgcacaggaaaagtgataacgcttcacacacggactgtcaagaggaatgttcgagtctg
gaagtaaccatggtcgcaagatttcagaaagctgtacagccttgtggaacatttgacaaa
gataagtgtcaaatcaactacatcatactttgtgagaacgacaccattcatctgcatctt
gccaaaacaaagcaatgtgtgagcccaccagatcctctcctgatagccttgccagtactg
ggaggtatcattggtgttggacttctactcctgatcatctggaagattcttacttccttc
tacgacaagattgaatacgctagatttgaacacgagatacagaatccgaaatggagtcag
accgacaatccaatttacaagacgccgctgacgtccaatcagaatccagtctacaaagga
acggtcgatgattag
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