Mercenaria mercenaria (northern quahog): 123531300
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Entry
123531300 CDS
T07835
Name
(RefSeq) integrin alpha-8-like isoform X1
KO
K06584
integrin alpha 8
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04512
ECM-receptor interaction
mmer04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123531300
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123531300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmer04515
]
123531300
Cell adhesion molecules [BR:
mmer04515
]
Integrins
Integrin alpha subunits
123531300
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
FG-GAP_3
FG-GAP_2
BatA
Motif
Other DBs
NCBI-GeneID:
123531300
NCBI-ProteinID:
XP_053374402
LinkDB
All DBs
Position
11:4838937..4930964
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AA seq
1095 aa
AA seq
DB search
MMEMFGLSFSDACTMCSFHRKYLRRSVCTGIGIAFVLFSVFCDLAVAYNIDLSTATIHSG
ETRSMFGFTVALHQDQGSKWLLVGAPKASTRQPGVTRGGAVFRCPVDSGSFCQEIPFDTK
GNGIRHNGTHYVDVEDKSDQWFGASLYSSENGIIVACAPRYVYFSTRLDKREPVGTCYVA
RPSSTDYEEYSPCRSRVDGLPLVTDQFHQQGYCQLGYSAVLTGQGRQLLIGAVGSWYWQG
QIFNFNFEDGPGRYRATKEGRAKDDYSYMGYSSAVGNFDSDSREDYVVGVPRGRQLQGKV
VIYTQNLTMIKTIKGEQFGSYFGYSVAVTDLDGNGLDDIVVGAPFFSDYSTDNSYETGRV
YIFYQSAKVNGSVTESGMSQKRKDILDGHHSQSRFGLAVAAIGDVDYDGYNDIAIGAPYG
GENGRGVVYIYHGSMKGIITDVQQAIKADDVLSGTETFGWSIAGGIDMDDNEYPDMLVGA
QNSNKAAFLRSRPVVRVTPTIRIDPQNITLGPETENCVIGSDKPEKVTCVTVYTCLLYTG
IGVPDKLDFELTLKFDTLKNDSSRVYYLHAETAREESKIIEAYKNNQKCFTFFGYLVKNV
RDKLTPIVADFSFDIHERTSRSRREVKPILNMRIPTTVQAAANISKNCGPDNVCIPDLSV
TALQTRDSYTLGEDEKIEVLVFVENRGEDAFESMLNISFPPGVTFYKTKNKKYEIPMFCD
SSSRNASFVYCDLGNPLPAKSRTNFTLIATPKSLNGTVPELILRLEVNSSNAENRTDMLN
NKALVSIPIQQRANIRLGGRSRPEQYIYTESEVRLYRGSAKVGPVLEHEYILNNRGPSGV
KTSLIKIDWPGEDENGLKYLDLMEDPIVSRTDISCRIYNTSVTTYSDKPGSPVVVHQRNV
DGENQLKRHTRETTDESDSKDKRDVEKRSSKEFKRIGCVEGKAGCVYIHCTVGYMEPEDI
VKIKIRSKIWTSSLINKKIDQPFFFVSKGTAEVLSMPFPNMKVAAGTYTRTTFDVTTYVN
PERLHPKRKGIEPWIIGVAVSAGLLLLFLLIVLLWWCGFFRRRRPEEQAFITPAAQNGDY
KRVNAGPPDAKYQYM
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaatgtttggattaagcttttcagatgcctgtactatgtgctcgttccacagg
aaatacttaagaaggagtgtatgtactggaataggaatagctttcgtgttatttagtgta
ttttgtgatctcgcagtggcttataatatagacctgtccaccgccactatacattctggg
gagactcgaagtatgtttgggttcactgtggcgctgcaccaggaccagggatcaaagtgg
ttgttagttggtgctccaaaagcttctaccagacagccaggcgtaactcggggaggtgca
gtgtttcggtgtccagtagattccggtagtttttgtcaagaaattccatttgatacaaaa
ggtaatggcattcggcataatggaacacattatgtagatgttgaagataagtcagaccag
tggtttggggcctccctctacagttcggaaaatgggattatagtggcatgtgcaccaaga
tatgtttacttctcaacacgattagacaagcgtgagcctgtaggaacctgttatgtagcc
agaccatcgtccacagactatgaggaatattctccttgtcggtcacgtgtggatgggttg
ccattggttacagatcagtttcatcagcagggatactgccaacttggatattctgctgtt
ttaacaggacaagggagacaactgttgattggagctgttggcagctggtactggcaaggt
cagattttcaactttaactttgaggatggtccgggacgttaccgagcaacaaaggaaggc
agagccaaggatgactactcttatatgggatattcaagtgctgttggcaactttgattcc
gattcaagagaagactatgtggttggagtgccaagaggtcgacagcttcagggaaaggtt
gttatttacacacagaaccttacaatgataaaaactatcaaaggagaacagtttggatcc
tattttgggtattctgtagcagtcactgaccttgatggaaatggactggatgatattgtt
gttggtgctccatttttctccgactacagtacagataactcatacgagacgggccgagtt
tatatcttctatcagagtgcaaaggtcaatggctcggtcacagagagtggtatgtcacag
aagaggaaggatatattagacggccatcattcccagtctaggtttggtctagcagttgca
gcgataggtgatgtggattatgatggatacaatgatattgccataggggcgccgtacgga
ggtgagaatggtagaggtgtggtttatatctaccatggttctatgaaaggaataataact
gatgtacaacaggctataaaagcagatgatgttttgtcgggaacagaaacatttggctgg
tcgattgctggaggtattgatatggatgacaacgaatatccagatatgcttgtaggggca
cagaattctaataaggcagcttttctgaggagtcgaccagtagtgagagtaactcccact
ataagaattgacccacagaatatcacccttgggccagagactgagaactgtgtcatcggg
agtgacaaaccagagaaagttacatgtgtgaccgtgtacacttgcttactctacactggt
attggtgttccggacaaactagactttgaactcacactcaagtttgacacattaaagaat
gactcgagtcgtgtttactacctccatgcagagactgcaagagaagaaagcaagattatt
gaagcatataaaaacaaccagaaatgcttcactttctttggatatttggtgaaaaatgtt
agagacaagttgactcctattgttgctgactttagtttcgacattcatgaacggacatct
cgatctcggagagaagtaaaaccaatattgaacatgcgtataccaacaacagtacaagct
gcggctaatataagtaaaaactgtggtccagataatgtttgcataccagatctgtcagtt
acagctttacagacacgagattcatacacactgggtgaggatgaaaagattgaagtccta
gtgtttgtcgagaatcgtggagaagatgcattcgaatccatgttaaatatatcatttcca
ccgggagtcactttttacaagaccaaaaataaaaaatatgaaattccaatgttctgtgat
tcatcatcaagaaatgcatcatttgtgtattgtgaccttggtaacccattacctgcaaaa
tctaggaccaactttacactgatagcaactccaaagtctttgaatggtacagtgcctgag
ctgatcttgagactagaagtgaacagttcgaatgcagagaataggacagatatgctgaac
aacaaagctttagttagcatacctattcagcagagggccaatattagactaggagggaga
tctagacctgagcagtatatctacacagaatctgaagttcgactgtacagaggttcagcg
aaagttggaccagttctagaacatgagtacattttaaataatcgtggaccaagtggtgtg
aaaacaagcctgatcaagattgattggccaggtgaggatgagaatggtttgaagtacctt
gacttgatggaggatccgattgtgtcgagaaccgatatcagctgccgtatatacaataca
tcggttacaacatactctgataaacctggcagtcctgtggtcgtacatcagagaaatgtt
gacggtgaaaatcagttgaaacgacatacaagggagacaactgatgaaagtgacagtaag
gataaacgtgatgttgaaaaaagatccagtaaagaatttaaaagaattggttgtgtagag
ggaaaagcaggttgtgtatatatacattgtacagttgggtacatggaaccagaggatatt
gtcaaaataaaaatcaggtcaaaaatatggaccagctctctcattaataaaaaaatagac
caaccatttttctttgtgtcgaaggggacagcagaagttttatcaatgcctttccctaac
atgaaagtagcagcagggacctacactaggacaacttttgatgtaactacgtatgtgaat
ccagaacggttacatcctaagcgtaagggtatagaaccatggataattggagtagcagtg
tctgcagggttacttctccttttcttactcattgtgcttttgtggtggtgtgggtttttc
cgacggcgacgaccagaagaacaggcgtttattactccagcagctcaaaatggtgattat
aaacgtgtaaatgctggaccaccggatgctaaataccagtacatgtag
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