Mercenaria mercenaria (northern quahog): 123531464
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Entry
123531464 CDS
T07835
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase-like
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123531464
Enzymes [BR:
mmer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
123531464
2.7.7.52 RNA uridylyltransferase
123531464
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
123531464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
RRM_1
PAP_assoc
RL
TUTase
zf-met
RRM_5
DUF7066
RRM_Rrp7
RRM_Nup35
Nup35_RRM_2
zf-C2H2_jaz
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
123531464
NCBI-ProteinID:
XP_053373681
LinkDB
All DBs
Position
11:72434348..72477957
Genome browser
AA seq
942 aa
AA seq
DB search
MNQQGVLHCEVCNAQLPNFNSMRWHIQGKKHQNALQFWEKKKETARLSIFVRNFPMGTTE
QELWQYFAQFGRVTKVTIVPPKNLYAIIEFSSADTADYVLQQNNHKLNSQNLIVKSREVE
VPGQPATNRYQHGYQQFRGGGHLGMGPMMRGRGGPGPGPGPGRGGYGMGRGGYQGNYGPG
PMYDQGYYDDQEPGSSKKKKANVEDQIEQYYHEELIEKLMKVKGVQNQLEWLCQNLQVTA
EEAQTKFQLCEKLQACLGRFFPGCTVNQFGSSVNGFGLSGCDMDIFLDLSTMHGRTWELE
PVKLPFVRDFRFLKEKEWGPLIPSDLDKMGMTDQCKLISRILIDNLEGILDVQVIPSNRC
PLVRFRYTNCDVKCDLSVNNKLALQNTKLLYLYSVLNSRVRLLVYAIRYWGKAKGVSGNQ
KASTKLSNYALTLMVLNYLQNLDPPVLPTIEKLSQLHGAAARTKIEGWDCTFAMDWQIIP
QSNNTQTAAELLSGFFSYWSAFNFMDNVLVTKSATEMPFTQFFEKDNMQDGRLRSFKASA
MNMQDPFVLNHNITQNVNEKTRDKIVRELRIAAIKTSVWGNEGFSMTTPSGGGDLIHLLN
NEVPDIILQEDQEKQEQIMEKGRMPAREAGEYEFEIELKPTQMSSKLLKQLQKGENYRVE
WCKKICEFIIRILKEVLMLTVEELPEATEEIRQKMKEEMAKKAAADKRNNEIKERRRLRR
IEKRKELEEKLKKEEEELKQKMSESEGAASGEPMEEGGAEAGTSGKEAEKAGEKRSRPVS
IFDIKVEQPKKFKGMRKYELNLDDMIEDSDDGEEIIEYKPDEPELRYKRECEAEVNFQHY
MRAWCMTWARRKKAKNYLVNEEGRTEENIPMEKLISSAIWQNDRAPLAHPVVGFYCYMES
VMEGNTTKVRVEMDCKEGSRDFNTFFQFSKMYLYRMIEKYFK
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcaaggtgtactacactgcgaagtttgcaatgcacagttgccaaatttcaat
tccatgagatggcatattcaaggaaaaaagcatcaaaatgctctccagttctgggagaaa
aagaaagagacagccagactgagtatctttgtacgcaacttcccgatgggcactacagag
caagaattgtggcaatattttgcccagtttggacgtgtaacaaaagtcaccattgttcct
ccaaagaatctttatgctatcattgagttcagtagtgccgacacagctgactatgtcctg
caacaaaataatcacaagctaaacagccagaatttaattgtgaagtctagagaagttgag
gttcctggccaacctgccacaaataggtatcagcatgggtaccagcagtttagaggtggt
ggacaccttgggatgggaccaatgatgagagggagaggaggcccaggccctgggccaggt
ccaggtcgtggtggctacggtatgggccgaggagggtaccagggtaactatggccctggt
cccatgtatgatcagggctattatgatgatcaggagccgggttccagcaagaagaaaaaa
gcaaatgttgaagaccagatagaacagtactatcatgaggaactgattgagaaacttatg
aaagtgaaaggggttcagaaccagttggaatggctgtgccagaacctgcaggtgacagcc
gaagaggctcagaccaagtttcagttatgtgagaagttgcaggcctgtcttggaaggttt
ttcccaggatgcactgtaaaccagtttggctcgtctgtcaatggatttggattgagtgga
tgtgacatggacattttcctggatctgagtacaatgcacggcagaacctgggaacttgag
ccagtcaaactaccatttgtgcgagacttcaggtttctaaaggagaaagaatggggtcca
ctgatcccttctgatctagacaagatgggaatgacagaccagtgtaaactgatatctcgt
atactgatagacaacctagagggtattctggatgtacaggtcatccccagtaacaggtgt
ccactggtcaggtttagatataccaactgtgacgtgaagtgtgatctgtcagtgaataac
aaattggcccttcagaatacaaagttgctctacctgtatagtgtactcaacagtagagta
agactactggtttatgctatacgatattggggaaaggcaaagggagtttctggtaaccag
aaggccagcacaaagctgtcaaactatgctcttacattgatggtactaaattacctgcag
aatttggatcctcctgttctaccaaccatcgagaaactgtcacagctacatggggcagca
gcacgtacaaagattgagggatgggactgtacatttgctatggattggcagatcattcca
cagtccaacaacactcaaactgcagccgagcttctgtctggatttttctcctattggagt
gctttcaatttcatggacaatgttctagtgacaaaatcagccacagaaatgccattcaca
cagttctttgagaaggacaacatgcaggatggcagattgaggagcttcaaggcttcagct
atgaacatgcaagacccatttgtgttgaatcacaatataacacagaatgtgaatgaaaag
acacgagataagattgtacgtgagttgagaatagcagctataaaaacatcagtgtgggga
aatgagggattctctatgaccacaccatctgggggaggagatctgattcatttgttgaac
aatgaggtaccagatatcattctacaagaggaccaagaaaaacaggaacagatcatggag
aaaggtcgcatgccagcaagggaagctggagagtatgaatttgagattgagcttaaacca
actcagatgtcatctaagttactgaagcagctacagaagggagagaactacagggtggag
tggtgtaagaaaatatgtgaatttattatcagaatcctcaaagaggtgttaatgttgact
gtggaagagttacctgaggcaactgaagaaattaggcagaagatgaaggaagaaatggca
aaaaaagctgcggctgataaaagaaataatgaaatcaaggaacgacgcagacttcgccgg
atagaaaaaaggaaagaactggaagaaaaactaaagaaagaagaggaagagctgaaacag
aaaatgagtgaaagtgaaggggcagcaagtggtgagccaatggaagagggtggagctgag
gctgggacttctggtaaagaggcagagaaagctggagaaaagaggtcaagaccagtgagc
atctttgacattaaggtggagcagccaaagaagtttaaaggcatgaggaaatatgagttg
aaccttgatgatatgattgaggattcggatgatggtgaagaaattatcgagtacaaacca
gatgaaccagagctacggtacaagagagagtgtgaggctgaggtcaacttccagcattac
atgagagcttggtgtatgacatgggcgagaaggaagaaggccaagaactatcttgtgaat
gaggaaggcaggactgaggagaacataccaatggaaaagctaatctcgagcgccatttgg
caaaatgatcgtgctccgttagcccaccctgttgtaggtttctactgctacatggaatct
gtgatggagggcaacactaccaaagtgagggtggagatggattgtaaggaaggctcgagg
gacttcaacacattctttcagttctccaagatgtacttatacaggatgattgagaaatac
ttcaagtga
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