Mercenaria mercenaria (northern quahog): 123531670
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Entry
123531670 CDS
T07835
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123531670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123531670
04121 Ubiquitin system [BR:
mmer04121
]
123531670
03036 Chromosome and associated proteins [BR:
mmer03036
]
123531670
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123531670
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
123531670
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
123531670
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
123531670
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
123531670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
zf-RING_6
Ank_3
BRCT
BRCT_2
Ank_KRIT1
zf-RING_5
zf-C3HC4_2
zf-C3HC4
Prok-RING_4
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
123531670
NCBI-ProteinID:
XP_053373735
LinkDB
All DBs
Position
11:complement(74275456..74306580)
Genome browser
AA seq
736 aa
AA seq
DB search
MKKSASVSFHYTRNALASLEEKFKCHKCGLFASSPVTLGGCEHIFCNLCCEAYLGTACPV
CSIPADVKDADVDRQLFNLASLCARLRQELAVDEKVLDNYKENEDPQIQCTPNQPIPGSA
SYDNTSVLNHDHVTDTKNRSLSKQVAGKKVVLSPATEGKTRIRKRKQQEKEETKQTNATK
CSETAKRSIEKRDSKRAISKVPSPNEKSPNKRRKSLPIDQTTLTQFYDYDEDEEELNCSD
KADDSENEKTTKSERKCRKTQKAINVPKTRLRHSLDSNIGKVTPEKVTPSAKSTSTAKKR
KGKKKATEGDESALDVSVSDTGSVGQRTPVSAKSRSKLTGVHTPVINSEKQVSTPKGRQL
GKDQRSAQSPALNKRNAKGETPLQVAAIKNDIDRVKQLLGEGANPNVRDNAGWTPLHEAC
NHGYLEIAKLLLDHGAMINIPGLENDTPLHDAINNGRVDCVKLLVSRGASLTLRNMHGHT
AWDLAITQTMKKALETPVMSSADTRTSQPVDVLEYQTPCLMGTGLSREEKVLLQKAASQL
QVKLLDEVTPEVTHIVTKFNSEGMCPRTIKIVQAILAGKWILNMEWLETSSQLGSLVCEE
AFEAQGTSLFPHAQAPYKGRMNRKQQLPGLFDGCYFYFHGSFEYANPTKEDFISIVTAGG
GKLLSREPKPGHLEMTLTVPYHADVKSELASCCVYIVHEANVKFKPIRTANMCSIPATWI
MDCVANFKLLPLPDVS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtccgcatctgtatcattccattataccaggaatgcattggcatcacttgaa
gaaaagtttaaatgtcacaaatgtgggctttttgcaagcagtccagtcactcttggaggt
tgtgagcacatattctgcaacttgtgttgtgaggcttaccttggtacagcatgccccgtg
tgcagtattccagccgatgtgaaggatgctgatgtagacagacaactgttcaacctggcg
tcattgtgtgctagactgaggcaagaactggctgtagatgagaaagttttagataactat
aaagagaacgaggatcctcagattcagtgcacaccaaatcaaccaatcccaggatctgca
tcatatgataatacatctgtattaaaccatgatcatgtgactgatactaaaaatagatca
ttgagtaaacaagttgctggaaagaaagtagtcctttcaccagcaacagaaggtaaaacc
agaattaggaaaagaaaacagcaagaaaaggaagaaacaaagcaaactaatgccactaaa
tgttcagagactgcaaaaagatctattgaaaagcgtgacagtaagagagcaatctctaaa
gttccctcgccaaatgagaaatcaccaaataagagaaggaaaagtttaccgatcgatcag
acgactttgacacagttttacgattatgatgaagatgaggaggaattgaattgttcagat
aaagcagatgatagtgaaaatgaaaagacaacaaaaagtgaaaggaagtgtagaaagact
caaaaagccattaatgtaccaaaaacaagacttagacatagtttagatagtaacattggg
aaggtaactccggaaaaagttactccctctgcaaagagtacatcaacagcaaaaaagagg
aaagggaagaaaaaggcaactgaaggagatgagagtgctttggatgtttcagttagtgac
actgggagtgttggtcagaggacacctgtgtctgcaaagtcaaggtcgaagttaacaggt
gttcataccccagttattaacagtgagaaacaagtgagcacaccaaaagggagacaactg
ggaaaagaccagaggtctgcacagtcacctgccttgaataagagaaatgcaaaaggtgaa
actcctcttcaagttgctgctatcaagaatgacatagacagagtgaagcagctgcttggt
gaaggagctaatccgaatgtacgagataatgctggatggactccactgcatgaagcttgt
aaccatggttacctggagatagccaagttattactggaccatggtgccatgataaatata
ccaggattagagaatgacacaccattacatgatgccattaacaatggtcgggtggactgt
gtgaaacttctagtatccagaggagcctctctcacacttaggaacatgcatggacataca
gcttgggaccttgctattacacagacaatgaagaaagcgctagagacacctgttatgtcg
tctgctgatactcggaccagtcagccagtggatgtattggagtaccagacaccttgtctg
atggggacaggcctatcgagagaagaaaaagttttgttacagaaggcagcgtcacagtta
caggtcaaactgctagatgaagtcaccccagaagtgacccacatagtgacaaagtttaac
agtgaaggaatgtgtccaagaaccatcaagattgttcaggcaatacttgcaggaaaatgg
atcctgaatatggaatggttagagaccagttcacagcttggtagtttggtatgtgaggaa
gcttttgaggcacagggaaccagcttgttcccgcatgctcaggctccatataaaggcaga
atgaacaggaaacaacagcttccaggattgtttgatggctgttacttttatttccacgga
agttttgaatatgccaacccaacaaaagaagatttcatcagtattgtaactgctggaggt
ggcaaactgttgagtcgtgaaccaaagccgggtcatcttgagatgacattgacagtaccg
taccatgcggatgtgaagagtgaacttgcttcatgctgtgtttacattgttcatgaagca
aatgttaagtttaaaccaatcaggactgcgaacatgtgttctattccagctacatggata
atggactgtgtggcaaatttcaaactgttgccactacctgatgttagttaa
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