Mercenaria mercenaria (northern quahog): 123532112
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Entry
123532112 CDS
T07835
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123532112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123532112
03036 Chromosome and associated proteins [BR:
mmer03036
]
123532112
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123532112
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123532112
PBAF complex
123532112
GBAF(ncBAF) complex
123532112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
123532112
NCBI-ProteinID:
XP_053374683
EnsemblRapid:
LOC123532112
LinkDB
All DBs
Position
11:21330792..21448708
Genome browser
AA seq
519 aa
AA seq
DB search
MQQPQRYPSQVPQMRSYPQPGYPSAPPRPGYSPGPGHPVAGPPMSGGIPPRMGMPHGPGM
SPHPYGGQQSKAKESGMTRPGMGPGMPPPQMGMGTPLDRKRQSDSRAAQHMKAKKKKKMA
DKILPQRVRDLVPESQAYMDLLAFERKLDATITRKRLDIQEALKRPMKQKRKLRIFISNT
FYPAKPAEGEEGEESVPSWELRVEGRLLEDAASAKLSDASKTKRKFSSFFKSLVIELDKE
LYGPDNHLVEWHRTQNTQETDGFQVKRPGDQNVRCTVLLMLDYQPAQFKLDPRLARLLGV
HTQTRPVIINALWQYIKTHRLQDPHEREYINCDRYLEQIFECKRMKFAEIPGKLHNLLMP
PDPIVINHVITVEGPDSRKTACYDIDVEVDDTLKQQMNSFLLSTQSQNEIANLDSKVCIG
GTTKRGIHETVETINQLKTNREFFLSFAKDPQEFINNWLISQTRDLKTMTDVTGNPEEER
HSDYYVRPWSQEAVCRYFYGKVQQRRMELEQALGIRSNT
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccgcaacgttatccatcacaagttcctcagatgagatcatatcctcagcct
ggatatccatcggctccaccaaggccaggatacagcccaggaccaggtcatccagttgct
ggaccccctatgtcaggtggaattccaccacgtatgggtatgccacatgggccaggcatg
tcaccacacccttatggaggccagcaatcaaaagcaaaggaatctggcatgacaagacca
ggtatgggaccggggatgcccccaccacagatgggtatggggacaccactggacaggaag
cgacagagtgattcaagagctgcacagcatatgaaagcgaagaagaagaagaaaatggct
gacaaaattttaccgcaaagggtgagagatctggtaccggaatcgcaggcttacatggat
ttactggcttttgaacgcaaacttgatgctaccatcacaagaaagcgtcttgatatacaa
gaggctttgaaaaggccaatgaagcaaaagagaaagttgcgtatcttcatttcaaacaca
ttctacccagctaaacctgcagaaggggaggagggagaagaatctgtaccttcttgggaa
ctgagggtcgagggcagacttctagaagatgctgccagtgccaagcttagtgatgccagc
aaaacaaaaaggaaattttcatctttcttcaagagtcttgttattgaactggacaaggaa
ctgtatggaccagacaaccaccttgtagagtggcatagaactcagaacacccaagagaca
gatggattccaagtgaaaagaccaggagaccagaatgtacgctgcaccgtcttacttatg
ctggactaccagcctgcacagttcaagcttgatccacgtttagcccggctcctgggtgtc
cacacccagacgcgacccgtcattatcaatgccctatggcagtacatcaaaacgcacaga
ctgcaagacccacatgagagggaatacattaactgtgacagataccttgagcagatattt
gagtgcaagcgtatgaagtttgcggagatacctggaaagcttcacaatctgttaatgcca
ccagacccgatagtcatcaatcatgtgataacagtggaaggcccggactcaaggaagacc
gcgtgttatgacatcgatgttgaagtggatgacacgttgaaacaacagatgaattctttc
ctgttgtctacacaaagccagaatgagattgctaacttagatagcaaggtttgtattggt
ggaactaccaaacgagggatacatgagaccgttgagacaataaaccagttgaagacaaac
cgagagttcttcctgagttttgccaaggatccgcaagaatttatcaacaactggcttatc
tcacaaacaagagacctcaagacaatgacagatgtaacaggtaatccggaggaagagaga
cactccgattactatgtgagaccatggtcacaagaagccgtctgcagatatttctatgga
aaggttcagcagagacggatggagttagaacaggcgcttggaatacgcagcaatacatag
DBGET
integrated database retrieval system
