Mercenaria mercenaria (northern quahog): 123532148
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Entry
123532148 CDS
T07835
Name
(RefSeq) DNA mismatch repair protein Mlh1-like
KO
K08734
DNA mismatch repair protein MLH1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03430
Mismatch repair
mmer03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123532148
03460 Fanconi anemia pathway
123532148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123532148
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
123532148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
123532148
NCBI-ProteinID:
XP_053374339
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Position
11:3224442..3484584
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AA seq
722 aa
AA seq
DB search
MSAGVGMIRRLDEVVVNRIAAGEVIQRPANALKEMIENSLDAKSTNITVTVKQGGLKLLQ
IQDNGSGIRKDDMNIVCERFTTSKLSKFEDLNSIATYGFRGEALASISHVAHVTIVTRTA
DSKCAFRGMYVDGKLKEAVKPCAGNVGTQITVEDLFYNISTRRKALKSAAEEHAKIVEVV
SRYAVHNCVVGFTLKKHGEGMADVRTPSNSTYTDNIRTIYGPAVARELLEVDHTDEKLSY
RLHGFVTNANYNVKKGTFLLFINHRLVESSSLKKAIDMVYQAYLPKHTHPFLYLSLEIAA
QNIDVNVHPTKHEVRFLHEDAIIESVQKTIETKLLGCNVSRTYYTQALLPGATVIPELSK
EEGNKNTDSGNKTYAHQMVRTDSREQKLDAFFKPTNQDAELPDNEREALQSTSNIQASSS
RSGEAPMETEMSRSSSTDKRECLRARRGGILFAPAVKKCFHYQIYIKYFYFFHRLAYLHT
FFPLTGLREMFSNHVFVGCVDKEFSLIQHQTKLLLTNTSKLTEELFYQLFIFDFGNFGLL
RLSEPAPIYDLAMMALDLEESGWTDADGPKENLATYIVSFLKSKSEMLQDYFSIEIDQKG
NMHTLPLVLDDYVPDLEGLPMLVLRLATEVDWDSEKQCFESFSREMSNFYAMKKSLFAST
DDSSEQKPENDPKNRSSWKWTVEHVIFPALRNLFYPPKHFAEDSSVLQIANLPDLYKVFE
RC
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctggtgtgggaatgattcggaggttagatgaggtagttgtcaatcgtattgca
gcaggggaagtaattcagagacccgcaaatgctctcaaggagatgatagaaaatagtctt
gatgcaaaatcaaccaacattacagtgactgtgaaacagggtggtctgaagctgttacag
atacaggataatggttcaggaattaggaaagacgacatgaatatagtctgtgaaaggttt
accaccagtaagttgtccaaatttgaagatttgaactctatagcaacctatggtttccgt
ggtgaggcattggcaagtatcagtcacgttgcacatgttaccatagtaaccagaactgcg
gactccaaatgtgctttcaggggtatgtatgttgatggtaagctgaaagaggcagttaaa
ccatgtgctggcaatgtagggacccagatcacagtagaagacttgttctataacatttct
acgagacggaaagcattgaagagtgcagcagaagagcatgcaaagattgttgaagtcgtt
agcagatatgcagttcacaactgtgttgtaggatttaccttgaagaagcatggtgaagga
atggctgatgtgagaacaccaagtaattcaacatatacagacaacatacgaaccatctat
ggacctgcagtagcaagggaactgttggaggtggatcatacagatgaaaagttgtcatac
agactgcacgggtttgtgacaaatgcaaactacaatgtaaagaagggaacatttctgttg
tttataaatcacagactagtggagtcgagctccctgaagaaggcaatagatatggtgtac
caggcatatctaccaaaacatacacatccatttctgtacctcagcttagagatagcagca
cagaatattgatgttaacgttcacccgaccaaacatgaggtacgatttctccacgaggac
gcaatcatagagagtgtacagaagacgatcgagacaaaattgctgggatgtaacgttagc
agaacgtactatacacaggcattgttgccaggagcaacagtgattccagaattgtccaag
gaagaaggaaataaaaatacagattcaggaaacaaaacttatgctcatcagatggttcgt
acagacagcagagaacagaagctggatgcatttttcaaaccaaccaatcaggatgcagaa
ttacctgataatgaaagagaggctctgcagtcgaccagtaatattcaagcttcttcttca
aggtcaggagaagctccaatggaaacagagatgtcaaggagttctagcactgacaaaagg
gaatgtttaagagctagaagagggggtatattgtttgctccagcagttaagaaatgtttt
cattaccagatctacattaaatatttttattttttccacagactggcttacttgcataca
ttttttccacttacaggcctacgcgagatgttttccaatcacgtgtttgttggctgtgta
gacaaggaattctccctgattcaacaccagacaaagttactcctcacaaacactagtaaa
ctaactgaagaattgttctaccagctattcatctttgattttggaaactttggtcttctg
agattgtcggaaccagcccctatatatgaccttgctatgatggcccttgaccttgaggaa
tcaggttggacagatgctgatggacccaaagagaaccttgctacctacattgtcagcttt
cttaagtctaagtcagagatgctacaagattacttctccattgaaattgatcagaaaggc
aatatgcatacactacctttggtactagatgattatgttccagacctagagggactgccc
atgctggttttacggcttgccactgaggtggactgggactcagaaaagcagtgttttgag
agtttttctcgagaaatgagcaatttctatgccatgaagaaaagtttgtttgcaagtaca
gatgatagctctgaacaaaagcccgagaatgatcccaagaacagatcatcatggaaatgg
actgtagagcatgtgattttcccagcattgcgaaatctcttctatccacctaaacatttc
gcggaggactccagtgttttacagatcgctaacctacctgatttatacaaagtttttgaa
agatgttga
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