Mercenaria mercenaria (northern quahog): 123532789
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Entry
123532789 CDS
T07835
Name
(RefSeq) glycine receptor subunit alpha-4-like isoform X1
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04080
Neuroactive ligand-receptor interaction
mmer04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123532789
04082 Neuroactive ligand signaling
123532789
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmer04040
]
123532789
Ion channels [BR:
mmer04040
]
Ligand-gated channels
GABA-A
123532789
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
123532789
NCBI-ProteinID:
XP_045170310
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All DBs
Position
11:complement(73571118..73632774)
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AA seq
485 aa
AA seq
DB search
MTMTVRFSALVFFIFIFVIYLTNGKNIATDSGYKDMSKYELLHYLLNKTSYDASIPPDYF
SGRATDVHVQIAIYDIISENEQNMEFSCLMYIRMNWTDHRLNYSEIARYDVLKVSGSYIN
KIWIPDIYFYQDHKTIFPGFIGKNELIYIGRNGNIRFSGRISTILICRMDLTLYPYDVQH
CQMTLQSYAYTEDDVQLHWKEDNPVIVNGDEIKDYPKWRNSSFGSQCDEPVGNFSILNTG
IQIKRTSHSFSQFISTPVVLVSIAMTSFSFGDNFTPRVTLSGASMTTIIMHWAGIYNKIQ
PASALVWLDKWMLINLCFVGGIILFTAIIYHVKHPKEIAAFKHLMEESITVQLERCRKRW
PEWNEVKTWKLDKKNKQITSTVDKETTLDDSLAIRTEKDLRWTVDRRFYAVKNDELREKY
YREFVESMEKDRSRLNLKLFNICRHYSRRFILDVLVFVVFVLSYVCFAAIYVNLWQNKHF
NSTDD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgacagtcagattttctgctttagttttcttcatttttatattcgttatttat
ttaaccaatggcaaaaatattgcaaccgattcaggatataaagacatgtccaaatatgaa
ctgttgcactatttactcaataaaacgagttatgacgcaagcatacccccagactacttt
tctggtagagcaacagatgtgcacgttcaaattgctatttatgacataatttccgaaaat
gagcagaatatggaattttcctgcctaatgtatatcagaatgaactggacagatcaccgt
ttaaattactcagaaattgcaagatatgacgtcctcaaagtcagtggctcatacataaac
aagatctggatacctgatatttatttttatcaggatcacaaaacaatttttcctggattc
attggcaagaatgaattaatttacattggaagaaatggaaacattagatttagcggcaga
atatccacgattttgatatgtagaatggatctcacactgtacccatatgatgtacagcat
tgtcagatgacgcttcaaagttatgcatatacagaagatgatgttcaacttcactggaaa
gaagacaacccagtgatagtaaatggtgacgaaattaaggactatccaaagtggagaaac
agttcgtttggttcgcaatgtgacgagccagttggaaacttttcaatcttaaatacgggg
attcagattaaacgaacttcccattcgtttagtcagtttatttctacacctgtcgtgctg
gtttcgattgctatgacttcattttcttttggtgataacttcacaccaagggtgaccttg
tctggagcctctatgactaccataataatgcactgggcagggatatataataaaatccaa
ccagcttcggctttagtatggctcgataaatggatgctgatcaatctgtgctttgttgga
ggaattatactctttactgctatcatctaccatgtgaagcatccaaaagaaattgcagcg
ttcaagcatctgatggaggagtctatcacagtgcaactggaacgttgtagaaagagatgg
ccagaatggaatgaagtaaaaacatggaagctagacaagaaaaacaaacagataacatct
actgttgataaggaaacaacactggacgacagcctagctatcagaactgagaaagacctc
agatggacagttgatcgaagattttatgcagttaaaaacgatgaactaagagaaaaatat
tacagagaatttgtggaaagcatggagaaagaccgaagccgtcttaatttgaaactcttc
aatatctgtagacactattctagacgatttattctagatgtactagtcttcgtcgttttt
gttttaagttacgtttgctttgcagctatatatgttaacctctggcaaaataaacacttc
aactcgaccgatgattaa
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