Mercenaria mercenaria (northern quahog): 123532967
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Entry
123532967 CDS
T07835
Name
(RefSeq) transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123532967
04121 Ubiquitin system [BR:
mmer04121
]
123532967
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
123532967
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
123532967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
123532967
NCBI-ProteinID:
XP_045170535
LinkDB
All DBs
Position
11:30857695..30901308
Genome browser
AA seq
1349 aa
AA seq
DB search
MQSIKEFDRKMPPGPQNFQEMKERVDDMEGHHYMDENGYSYGYDPNQMYYVDPNMQQTEY
YPQGQQYGGWGWQPQGYASIQQPMYGGFAQQGMNYDFYNQYDNGMVYGQQGFVNYDAQSS
YGRQSVSNSRSKHSYSQNRSRNRQRPEAKQNIATNDTENSNNNAYNSNDGLQKETSSGEV
IKEIGQKSGVKDNATEESKDSLDLKDQDKFRNRGSRFQGTDSRTRKFDSRQQMLDKQRGY
DRSYRPDRGDKNSSAAANGDIDDSVNNKPEVKSENNSSDDKTDFDPGARPKSYRDARNSG
YRRDKQFDRDRKSGQEGGRYGTRSHGADKGPIDNKNNDFDSKISKESVKPDRTDAESPVN
DVANKSEENANGKDSSSRKKKKEYQVYSSNSPREWQVKPAQYNSPRDAYDRYNYRGQDYN
KRHKEFTSQALERGGDRTKLSVEVVGEENATSQEGGTGGDDENAGGFSDSKMITEGQRKT
KNIGPQRGTRFKQKGKVDESQRGSLIEQLSKGNYECMVCCEIVRASHAVWNCNNCYHVFH
LRCIKKWAKSPNSVVSGTEKDGWRCPACQNLSFKFPNQYRCFCGKVRDPEVTRMDTPHSC
GDVCQKDRGEGCKHPCNILCHPGPCPECNATITKSCDCGKTKQSAKCSQSTVIKCELICE
RMLNCGRHFCKAKCHSGPCEKCEEVIVQECYGEHESREVLCGSEESFTEAYSCKTICSKK
LDCGNHTCDKPCHRHACESCPLLPANTTHCPCGAKKLTELSSKPRASCLEPVPTCGAICN
KVLDCGPPGSPHRCDKPCHEGPCGPCNGTTLLSCQCLFMDKEFKCSEIANMNGEDHKFLC
DKRCNRKKSCGRHKCGQPCCVREEHPCDLLCGRKLPCGQHKCTEPCHKNNCPPCLMAGFD
ELTCYCGAEVLYPPIPCGTNPPECHRPCTREHGCDHTVRHNCHSEEKCPPCTELTKKMCM
GNHVMRSNIPCHLTEISCGMKCSKSLPCDEHSCIKTCHKGPCLEEGQVCQQPCQKKRDLC
DHACGAMCHGDTPCPKTPCKAKVVLKCACGNRENETLCSTGAISPDSDYQKLAMQSLKDS
IQGIMGASSSVNISKLNQMKQGQARVLECNEECAVMERNRRMALALEIQNPDLSSKLGNP
TYTDFLKEYAKKDSTFVAGIEKAFSDLIQSAKQSKQVSRSHAFPSMNMNQRRLVHELAEY
YGCQTQSYDYEPKKNVVATAPRDKCWLPSVTLTAQVQRELHPRAPPPIPHVFKEDALRMT
NLASKQSTSVLGDRDALSSNTPEGWQVIGKKTKKPGSSSKSAIATIDKFESNLADICSTG
TINYDSLSKESKQALKSEPVIDYFDFTVN
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtataaaagaatttgataggaaaatgccacctggtccgcaaaattttcaggag
atgaaggaaagggttgatgatatggaaggacatcattatatggatgaaaatggttacagt
tatggttatgatccaaaccagatgtattatgtagatccaaatatgcagcagacagagtac
tatccacaaggtcagcagtatgggggttggggatggcagccccaggggtacgcatctatt
cagcagccgatgtatggaggttttgcacaacaaggaatgaattatgacttttataatcag
tatgataatggaatggtatatggacagcaaggctttgtcaattatgatgcacaatcttcc
tatggaagacagtcggtgtcaaattctcgaagtaaacattcttactcacagaatagatca
agaaatagacagagaccagaggctaagcaaaacattgctacaaacgatactgaaaattct
aataataatgcttacaatagtaacgatggtttacaaaaggaaactagttcaggggaagta
ataaaagaaataggtcaaaaaagtggtgtgaaagataatgcaactgaagagtcaaaagat
agtttggatttaaaagatcaggataagtttagaaatcgagggagtagatttcaggggaca
gattctagaacaagaaagtttgacagtcgacaacagatgcttgacaagcagagagggtat
gataggagttacaggcctgacaggggagataaaaatagtagtgctgcagcaaatggggat
attgatgattctgtgaataataaacctgaggtaaaatctgaaaataattcatctgatgat
aaaactgatttcgatccaggagcacgacctaagtcctacagggatgctaggaatagtggt
tacagaagagacaaacagtttgatagagatagaaaatctggtcaagaaggtggaaggtat
ggaactagatcacatggtgcagacaaaggtccgattgataataaaaacaatgattttgat
agtaaaatatctaaggaatcagtgaaacctgatagaacagatgctgaatctcctgtgaat
gatgttgctaataagtctgaggaaaatgctaatggaaaagatagttccagcagaaagaaa
aagaaggaataccaggtttattcgtcaaatagtccaagagagtggcaggttaaaccagct
cagtacaatagcccgagggacgcttacgataggtataactatagaggccaagattataat
aaaagacataaggaatttacctcacaagccttagagagagggggagatagaacaaaatta
agtgtggaagttgttggtgaagaaaacgcaactagtcaagaaggtgggactggaggggat
gatgaaaatgctggaggttttagtgatagtaaaatgattacagaaggtcagagaaaaaca
aagaacattggtccacagagaggtaccaggtttaagcagaaaggcaaggttgatgagagt
caaagaggttcattgatagagcaactcagtaaaggaaactacgagtgtatggtatgttgt
gagattgttcgtgcaagccatgctgtctggaactgcaacaattgctatcatgtatttcat
ctgcgatgtatcaagaagtgggcaaaatctccgaattctgttgtatctggtacagaaaag
gatggttggagatgtccggcatgccaaaacttatcatttaagttcccaaatcagtataga
tgcttctgtggtaaagtgagagatcctgaggttactcggatggacacgcctcacagctgt
ggagatgtttgtcagaaagatagaggtgaaggctgtaaacatccttgtaatatactgtgt
catccaggaccatgccccgagtgcaatgcaaccattacaaagtcttgtgactgcggcaaa
acaaaacagtcagcaaagtgtagccagtcaactgttatcaaatgtgaattgatatgtgag
agaatgttaaactgtggaaggcacttctgtaaggcaaagtgtcattctggaccatgtgaa
aaatgtgaagaagtgattgtgcaagaatgctatggtgaacatgaaagcagagaggttctt
tgtggaagtgaggaatcatttactgaagcttacagctgtaaaactatttgctcaaaaaaa
ttggactgtggtaaccacacatgtgataaaccgtgtcacagacatgcctgtgaaagttgt
cctctactaccagcaaatactactcactgcccctgtggtgctaaaaaacttacagaactc
agttcaaagccgagagccagctgccttgagcctgttcctacatgtggtgctatttgcaat
aaagttcttgactgtgggccaccaggaagtccacatagatgtgataagccgtgtcatgaa
ggaccatgtgggccgtgcaatggaactacattactttcttgtcaatgtctcttcatggac
aaagaattcaagtgttcagaaattgcaaacatgaatggtgaagatcataaatttctctgt
gataaaaggtgcaataggaagaaatcctgtggtcgccataaatgtgggcaaccttgctgt
gttagagaagaacatccgtgtgacttgttgtgtggtagaaagcttccctgtggacaacac
aagtgtacagagccctgtcataaaaataactgccctccatgcttgatggctggttttgat
gagttgacatgttactgtggtgccgaggtgttataccctcctattccgtgtggtacaaat
cctccagagtgtcatagaccctgtactagagagcatggatgtgatcatacagttcgccat
aactgccacagtgaagagaaatgtcccccttgtacagagcttaccaagaaaatgtgcatg
ggaaatcatgtgatgagatccaacattccctgtcatctgacagaaatatcgtgtggtatg
aagtgcagtaaatcactcccctgtgatgaacattcctgcattaagacttgtcataagggc
ccatgtttagaagaaggccaggtgtgtcagcagccgtgccagaagaaacgagacctatgt
gatcatgcttgtggtgccatgtgtcatggtgatacaccttgtcccaaaacaccttgcaaa
gctaaggttgtattgaagtgtgcctgtggtaacagggagaatgagacactttgttctaca
ggggccatcagtccagactctgactatcaaaaattggctatgcaaagtttgaaagattct
attcaaggaattatgggagcttcctcatcagtaaacattagcaagcttaatcaaatgaag
caaggacaggctcgtgtgttggaatgtaatgaagaatgtgctgtgatggagagaaataga
cgtatggccctcgcccttgaaatacagaatccggacctcagtagtaaacttggcaatcct
acatatacagacttcctcaaagaatatgccaagaaggactcgacatttgtagctggtata
gagaaagcatttagtgacctcatacagtctgctaaacagtctaagcaggtttcaagaagt
catgcatttcctagtatgaatatgaatcaaaggagattggtgcacgagctagccgagtat
tatggctgtcagacccaaagttatgattacgagccaaagaaaaatgtagtggctactgct
ccaagagataaatgttggttgccgtcagttacattaactgcccaggttcagagagaatta
caccctagagctccgcctcccatacctcatgtattcaaagaggatgctctcaggatgaca
aatctagcatcaaaacaatcaacatcagttctgggtgatcgggacgctttatcatcaaac
actccagaaggttggcaggtgattggcaaaaaaacaaagaagccgggctcttcttcaaaa
tcagctattgcaacaatagacaagtttgaatcaaacttggcagacatatgctctacggga
acaatcaactatgactcactcagtaaagagagtaaacaggctttaaaatcggagccagtg
atcgactattttgattttactgttaattaa
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