Mercenaria mercenaria (northern quahog): 123533130
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Entry
123533130 CDS
T07835
Name
(RefSeq) FACT complex subunit SSRP1-like isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123533130
03036 Chromosome and associated proteins [BR:
mmer03036
]
123533130
Transcription factors [BR:
mmer03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
123533130
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
123533130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
123533130
NCBI-ProteinID:
XP_053375271
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All DBs
Position
12:16294536..16593554
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AA seq
776 aa
AA seq
DB search
MSSDYQEYPDVVQEVRGALNPGRLKFQGNSIVFKNTKTGKVDQFQGTDIDQVKWLKRARG
YCLKIVLHSGHIHRFDGFKEVDQEKLGSFISRNYNTKLETVDLSVKGWNWGQAKFEGNGL
NFVIDNNLAFEIPLNNVSHTTTAKNEITLEFHQNDDAAVSLMELRFHIPGDPANQEKDTV
NEFYNQVMENADIIQATGDAVCVFPEVQCLTPRGRYDIKMYTTFLQLHGKTFDYKVPYTS
VLRLFLLPHKDGRQIFFVVSLDPPIKQGQTRYHFLILLFYKDDEMTLECGLGDELEEKYE
GKLQKEMNGPEYEIVSKVFKAVTTRKITVPGSFLGHSGTPAIGCSYKAATGLLYPLERGF
IFVHKPPVHIRFDELAAVNFARSAGSTRSFDFDVETKAGNVYTFSNIEKDEYGKLFEFAK
NKNLRMKNIGNKKNGVNDYDAMMDSDDEDGGHDAYLERMKAEGKDRDSDALDDDSDSSDE
DFRPEDSASDVAEEYDSNPPTTSESDEDASDSGGEQDEEKREEKRKEKERRKQEKREQRE
KTKSKSKSAKTVREGGSKKKKKKEDRDPNKPKRPQTAYFLWFMSERENIKSENPGFSVVD
ISKKAGELWKGLSPEDKKPFDLKAREAKEEYDEAMKEYNKKLREEGPPKTSPKEKKAKKS
KSSPKKPAAESKAGSGGSYKSKEFISESESSSSSSGDEDDRPLKKLKAGKKEKKEKMEVD
ESGSESEDEKPTGVKRRSQRKEGEESDVGSLPDEEEILSSPEHSDPGEAASGSDSD
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgactaccaggagtatcctgatgttgttcaggaggttcgaggtgctcttaat
ccaggtcgtttgaagtttcaaggtaacagtatagtgttcaagaatacaaagacggggaaa
gtagaccagttccagggaacagatatagaccaggtgaaatggttgaagagggccagaggt
tattgtctcaaaatagtcttacatagtggacatattcacagatttgatggctttaaagaa
gtggaccaggagaaattgggttcatttatatcacgtaattacaacaccaagcttgagaca
gtagatctttctgttaaaggctggaactggggacaagctaaatttgaaggtaatggactg
aactttgtaattgacaacaacctggcgtttgagatacccctgaacaatgtatcacacaca
acaacagcaaagaatgagatcacactggagttccaccagaatgatgatgcagcggtctca
ttgatggaacttagatttcacattcctggagatccagccaatcaagaaaaagacacagtt
aatgaattttataaccaagtgatggagaatgctgacattatacaagctacaggtgatgct
gtctgtgtgttcccagaggtgcaatgtctcacacccagaggtcgctacgatatcaaaatg
tacacaacatttttgcagctgcacggtaaaacgtttgattacaaagttccatacacgtca
gtcctccggttgttcctccttccacataaagatggtagacagatattctttgtggtgagt
ttagatccaccaatcaaacagggacaaacgagataccattttctgatattactgttttat
aaagatgatgagatgacactagaatgtggactgggagatgaattagaagaaaagtatgaa
ggcaaactacaaaaagaaatgaatggaccagagtatgagattgttagtaaagtgttcaag
gcagtaaccacaaggaaaatcacagtaccaggcagcttcctgggacattcgggtacacca
gcaattggctgttcctataaagccgccacaggtcttctctacccacttgagagaggtttc
atattcgtgcacaaacctcccgtgcatatcagatttgacgagcttgctgctgtaaacttt
gctagaagtgctggcagcacgagatccttcgattttgatgttgagacaaaggctggaaat
gtgtatactttctctaatattgaaaaagatgagtatggaaaactgtttgaatttgcaaag
aacaagaatctaagaatgaagaatattggcaataagaagaacggtgtcaatgactatgat
gctatgatggacagtgatgatgaggatggaggacatgatgcctacctggagagaatgaaa
gctgaagggaaggacagagacagtgatgctctcgatgatgacagtgactcttctgatgaa
gatttccgaccggaagactctgctagtgatgttgctgaagagtatgatagtaaccctcca
acaacatcagaatcagatgaggatgcaagtgactctggtggtgaacaagatgaggagaag
agagaggaaaagagaaaggaaaaagaaagaagaaagcaggaaaagagagaacaaagagaa
aaaactaaatcaaagtcaaagtctgcaaaaactgtgagagaaggtggatcaaagaagaag
aagaagaaggaagatcgtgaccctaacaaaccaaaacgcccacagactgcatacttcctc
tggttcatgtcggagagggagaacatcaagtcagagaatccaggtttctctgttgttgat
atctccaagaaagctggcgagttatggaaaggtttgtcaccggaagacaaaaagcccttt
gatctgaaagctagagaggcaaaggaggaatatgacgaggctatgaaagagtacaataaa
aaactgagggaagaaggacctcccaaaactagtccaaaagaaaagaaggctaagaagtca
aagtccagtccgaagaaaccagcggctgaatcgaaggcaggatctggcggctcatataaa
agtaaagaatttatatcggaaagtgaatcatcatcctcgtcctctggggatgaagatgat
agacctcttaagaaactgaaagctgggaagaaagagaaaaaggagaaaatggaggtagat
gagtcagggtcggagtcggaggacgagaaaccgacgggtgtgaaacgaagatctcagaga
aaagaaggggaggagtcagatgttggttctttaccagatgaagaggagattctcagttct
ccagaacactcagatcctggagaagcggcatccggttccgattcagactga
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