Mercenaria mercenaria (northern quahog): 123533699
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Entry
123533699 CDS
T07835
Name
(RefSeq) GATOR complex protein WDR24-like
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
123533699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123533699
Membrane trafficking [BR:
mmer04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
123533699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
WD40
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_C
MIOS_WD40
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_RIG_1st
Beta-prop_ACSF4
TFIIIC_delta
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
123533699
NCBI-ProteinID:
XP_045171417
LinkDB
All DBs
Position
12:25784114..25814433
Genome browser
AA seq
582 aa
AA seq
DB search
MQTVTKIVHDRVTSSNPQTMFIHCGGAVSTIAQNKDASQVVVGGRNVFKIYSVDDDCFEQ
KYDLRVGKHVNLNYCASDVAWNHTDDHILATGATNGAVVIWDLNRMSRNKQEHIFQEHKR
TVNRVCFHENEHKLLLSASQDGSMKLFDLRKKEVSLSFSMGSTSVRDIMFSPCNLNYFGF
ASADESGSLMIWDMRRPDRCEKQFPAHSGPVFSVNWHPEDKNWFATAGRDKMIKVWDLSK
QKCLYTIYSIASVARIKWRPQRKFHIASCSLLVDCSINIWDIRRPYVPFATFDNHKDVTT
SMVFKNKDPHVMLSGSKDNYLYQHVFRDAKRPGEELVPAGLDLSVYGTVGHANSDKQGKL
SLISEGGGIMSGLLNKKSTERNDHFVDVAAFMQVFSDTGQVVPIEELSWMVESARNYKLT
GLPVEDLCKHNSKVAQSLHRGQVAQAWLLVLTLYCTPIVENKNLHMNRTSSVMSSGLTEK
IDIDKSKQTKEPDTDVDEKNLDGTSGNSDEEIDDKEMFDSKLSNIARGQINTDWDIFFGD
GEPGSFDIAEINDFSDTKQEWILPSEAFHPRHEIQIVEDYST
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcagacagttacaaagatagttcatgacagggttacatcgagcaatccacagacaatg
ttcatccattgtgggggagcagtgagtacaattgcccaaaacaaagatgcatcacaggtg
gtcgttggtggaagaaatgtattcaaaatctacagcgttgatgatgattgttttgaacaa
aaatatgatcttcgtgttggaaaacatgtgaacctaaattactgtgcctctgatgtagca
tggaatcatacagatgatcatatactagctacaggtgcaactaatggagctgtagtgatt
tgggatttgaacagaatgtctcgtaataaacaagagcatatatttcaagagcataaacgg
actgtgaacagagtgtgttttcatgagaatgagcataaattactactgagtgcctcgcaa
gatggttccatgaaactctttgatttaaggaaaaaggaggtcagcctgagtttctccatg
ggtagtacaagtgtgagagatatcatgttcagcccttgtaatcttaattattttgggttt
gcgtctgctgatgaaagtggcagtcttatgatctgggacatgagaaggcctgatcgatgc
gagaagcagtttcccgctcacagcggtcctgtgttcagtgtcaactggcacccggaagat
aaaaactggtttgcaacagctggtcgggataaaatgatcaaggtatgggacttgagcaaa
cagaaatgtttatataccatctatagtatagcctcagtcgctagaatcaaatggcgtcca
cagaggaagtttcatatagcctcatgctcacttctagtcgattgcagtatcaacatctgg
gacattcggagaccctacgtcccctttgctacattcgataatcataaagacgttacaaca
agtatggtgtttaagaataaagaccctcatgttatgctgagtgggagtaaggataattat
ctatatcaacacgtgttcagggacgccaagaggccgggggaggagctagttcctgcaggg
ttagatttgagtgtgtatggtacagtcggacatgctaatagtgataaacaaggtaaattg
agcttgatttctgaaggaggtgggataatgtctggcctactgaacaagaagagcacggaa
cggaacgaccattttgttgatgttgcggccttcatgcaggtgttctcagacaccggacag
gtagttcctatagaggaattatcatggatggtagagtcggcgaggaattacaagcttaca
ggacttccagttgaagacttgtgtaaacacaattctaaagttgctcaatccctgcataga
ggacaggttgctcaggcctggttgttggtgctcacattatattgtactcctatcgtggaa
aacaagaatctccatatgaaccgaacatcatcagtgatgtcatcaggacttacagagaag
attgatatagataaaagcaagcaaacaaaagagccagacacagatgttgatgagaaaaat
ctggatggcacttcaggtaactctgatgaagagattgatgataaggaaatgtttgattct
aagttatcaaatattgccagaggacagataaacacagactgggatatcttctttggtgac
ggtgaacctggcagttttgatatagcagaaattaatgactttagtgacaccaaacaggag
tggatcctaccttctgaagcatttcatccgaggcatgaaattcaaatcgtggaagactat
tccacttga
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