Mercenaria mercenaria (northern quahog): 123533755
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Entry
123533755 CDS
T07835
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03030
DNA replication
mmer03410
Base excision repair
mmer03420
Nucleotide excision repair
mmer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123533755
03410 Base excision repair
123533755
03420 Nucleotide excision repair
123533755
03430 Mismatch repair
123533755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmer03032
]
123533755
03036 Chromosome and associated proteins [BR:
mmer03036
]
123533755
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123533755
DNA replication proteins [BR:
mmer03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123533755
DNA Replication Termination Factors
ELG1-RFC complex
123533755
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
123533755
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123533755
Check point factors
HRAD17(Rad24)-RFC complex
123533755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_16
RCF1-5-like_lid
AAA_22
AAA_14
Rad17
Mg_chelatase
AAA_24
Viral_helicase1
AAA_11
nSTAND3
AAA_5
AAA_assoc_2
RuvB_N
AAA_19
AAA_28
DNAX_ATPase_lid
AAA_25
ABC_tran
AAA_18
AAA_30
MipZ
MeaB
DUF815
SLFN-g3_helicase
MCM
FtsK_SpoIIIE
Spectrin_2
RNA_helicase
IstB_IS21
AAA_23
NTPase_1
DUF7745
AAA_3
Motif
Other DBs
NCBI-GeneID:
123533755
NCBI-ProteinID:
XP_053376284
LinkDB
All DBs
Position
12:71239224..71263155
Genome browser
AA seq
353 aa
AA seq
DB search
MSGEKMETNEATEQMQNKPESSSNFNEVPWVEKFRPVKLSDIVGNEQTITRLEVFAREGN
VPNVIIAGPPGTGKTTSILCLARAMLGPSYREAVLELNASNDRGIDVVRNKIKMFAQQKV
TLPAGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVL
RYTKLSDAQVLKRLLEVSEAEKVSYTDDGLEAIVFTAQGDMRQALNNLQSTYQGFEHVSS
ENVFQREQSSVCDEPHPLLIKDMLKHCVVGNIDEAYKIMAYLWRLGYSPEDIIGIVFRGC
KTHDMPEYLKLEFIKEIGYTHMRIAEGIHSLLQMSGMLARLCKKSAEPNVLAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggaaaaaatggagactaacgaagctaccgaacaaatgcagaataagccagaa
tctagttctaactttaatgaagtaccttgggtagaaaaattcagaccagtcaagctgtca
gatattgttggaaatgaacaaacaataacaagattagaggtgtttgcacgagaaggcaat
gttccaaacgtgattattgcaggtccgcctggtacgggaaaaactacaagcatattgtgc
ctagcacgtgcaatgttagggccatcatacagggaggcagtactggaacttaacgcctct
aatgacagaggtatcgatgtagttagaaacaagattaaaatgtttgcccaacaaaaagtc
acattaccagcaggaagacataaaatcatcatcttagatgaagcagacagtatgactgac
ggagctcagcaggcactcagaagaaccatggagatatattcaaaaactacaagatttgca
ttggcttgtaatgcttctgataaaattatagagccaatacagtctcgatgtgctgtgtta
cgctacacaaagttatcagatgcccaggtgttgaaacgtttacttgaagtgagtgaagca
gaaaaagtgagctatacggatgatggattggaggcaatagttttcactgcacaaggtgat
atgagacaggcattgaacaatctgcagtcaacataccaaggctttgagcatgtcagcagt
gaaaatgtttttcaaagggaacaaagttctgtctgtgatgaaccccacccattgctgatt
aaggacatgttaaaacattgtgtggtgggcaatattgatgaggcatacaagatcatggcc
tacctctggaggctcgggtactcccctgaagacatcataggcattgtattcaggggctgt
aaaacacatgacatgcctgaatatctcaaactggagtttatcaaggagataggatacaca
catatgagaattgcagaagggatccattcactactacagatgtcaggaatgctggccaga
ttgtgcaagaaatcagcagaacctaatgttttagcatcatga
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