Mercenaria mercenaria (northern quahog): 123533774
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Entry
123533774 CDS
T07835
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03440
Homologous recombination
mmer03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123533774
03460 Fanconi anemia pathway
123533774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123533774
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
123533774
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
123533774
FA (Fanconi anemia) pathway
Downstream FA components
123533774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
ARCH_RTEL1
HBB
Motif
Other DBs
NCBI-GeneID:
123533774
NCBI-ProteinID:
XP_053375442
LinkDB
All DBs
Position
12:25187231..25220059
Genome browser
AA seq
1207 aa
AA seq
DB search
MEHNIKYVEHLKLRNMLESLLNFIEGNNSNLDQSDYDTSYKVWSGFDIVVRLKGIGLGPD
SFQEYQRCFEQAVAQSEDEAMSVRDRQNQEVKMSSNTSKILEQLFQILDYMYRDDLKFVE
DYRVAIMKSMQYVSNRDTGDRWLGKNRRGGSRIVVFTLNFWCMNPAVAFSDFSSCRNVVL
SSGTLSPMSSFASELGTPFPIQLEANHIIEDKQVWVGAVGVGPAGKQLQAVYRNMETFDF
QDELGDFIYQVCTKVPHGVLCFLPSYRALEKFTDRWRLTGLWSKLASRKRVMVEPRAADR
EDFDGMMKAFYEVVKGDLYNDYLDEDECNDDDSEIDGALFFAVCRGKVSEGMDFADNNAR
AVITVGIPFPSIKDVQVKLKREYNDKHRIDRGLLSGSDWYEIQAFRALNQALGRCIRHRK
DWGALIIVDDRFVKRTDKYCKSLSRWVRSKVQTFHAFSDFLGSMSDFTEKMVKEMPIVDP
DTSFIPCTPGDGRRDSSIYKRHSLDESHLNNSIPASPNFSSPPMSQSPHMQNLFRTPEIP
DKGRTATSPAVTGLAGVSSPSIQQQIMNVINSGTAPKDQPYYIILNQGTPSEQAFLIEPN
KHGGSNPTQTKVPFTMSQMSDTSLPGSSQQHKIVFNIPPQLPVQGTSLLQNQILLSPSQA
ALQGTSLNPDIKGGNQQSSLNFPVGEKKENVPKEEKKTDMVFTLGSSSLSAEEQLKRFVS
SSQAPRNQAYYVVVNNGEANERAFFIEPNKKAKPKPGSERKTETEKTDSSVATNEAARSE
QEVKPVKSEQDLKPVKSEQEVKPVKSEQDLKPVKSEQEEVVPDSSTEGDPEPQNKFLKFC
QLPKTPSKVPVATVTPQRQAEQTVTSVKTEPDSHHKSVPSTSDPHPPACTSPVLFEDVPV
DVSAGAGVDNTSNVADTENELNTKKKPIFKKRNSLSTKMPKEDFIVQSENVEKNEVENLR
RDNNVEKDSNEVDGADSDFKTESNARTKLTTRGKVNRSVVDKVKQGRKKSTDGMILQDTA
RENTLAEVDGIAASGNDVHSDEEFLNTRRRGGRKRKSTSKFEEWSKRSKKGVIYDDVDNT
AEKENEVGSKYLSCVKCGKQLLKSSYHEKQKRHPEFLSGVFKKNVELLHFPNVKAEEVLL
QTVVAEASSKGLLLNSVYDDTARCCIQYLECKACKTDTVIGARVLLADSNSRYKFGQTWI
LSSAAKI
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggaacataacatcaagtatgttgagcatctaaagttgaggaacatgttggagagtttg
ttgaacttcattgaagggaacaactcaaacttggaccagtctgattatgatacttcatat
aaagtttggtcaggatttgacatcgttgtacgattgaagggcataggtctaggcccagac
agtttccaggaatatcagagatgttttgagcaagctgttgcccagagtgaagatgaggca
atgtctgtgagagatagacagaatcaggaggtgaagatgagcagtaacacctcgaaaata
ctggaacaactcttccagatactggactatatgtacagagatgatctcaaatttgtagaa
gattacagggtagccatcatgaagtctatgcagtatgtttccaacagggacacgggtgac
agatggcttggaaagaataggagaggtgggtctagaattgttgtgtttaccctgaacttc
tggtgtatgaaccctgctgtggcattttcagacttcagtagctgcagaaatgttgtgtta
agtagcggtaccttgtcacctatgtcatcttttgcttctgaactgggtacaccgttccct
atacagctagaggccaatcatatcatagaggataaacaggtgtgggtaggagcagtggga
gttgggcccgctggtaaacagttacaggcagtatatagaaacatggagaccttcgacttc
caagatgaactaggagactttatataccaagtctgcactaaagttccacatggtgtgctt
tgctttctgccttcctacagagcactggaaaaattcacagacagatggaggttgacagga
ttatggagcaagcttgcaagtcgtaagcgtgtgatggtagaacctagagccgctgacaga
gaggattttgacgggatgatgaaagcgttctatgaagttgtaaaaggagatctctacaat
gattatcttgatgaagatgagtgtaatgatgatgattctgagatagatggtgccttgttc
tttgctgtgtgtagaggtaaagttagtgagggaatggattttgctgacaacaatgctaga
gccgtgattacagttggaatacctttccctagtatcaaagatgtgcaggtaaaattgaag
agagaatacaatgacaaacacaggattgatagaggactgctaagtggcagtgactggtac
gaaattcaggctttcagggccttgaatcaggctctaggtagatgtataaggcacaggaaa
gactggggagctttgattatagttgatgacagatttgtgaaaaggacagacaaatattgc
aagagtctgtctcgctgggtgagatcaaaggttcagacatttcatgctttttctgacttc
cttggttcaatgtcagacttcacagagaaaatggtcaaggaaatgcctatagtggatcct
gacacctcatttattccatgtacacctggtgacggaaggagggattcttccatatacaag
aggcactcgctggacgagtcacacttaaataactccataccggcatcacctaacttcagt
agtccaccgatgagtcagtcaccacacatgcaaaacttgttccgaactccggaaatccct
gacaaaggtagaacagcgaccagccccgctgttacagggcttgcaggagttagctcccct
agcatccagcagcagattatgaatgttatcaattcagggacagcaccgaaagatcaacca
tactacataatactaaaccagggaacaccaagtgaacaagcatttctgatagagccgaat
aaacatggaggtagtaatcctacacagaccaaagtaccattcacgatgtcacagatgtca
gatacaagtctgcctggaagtagtcaacaacacaagatagtcttcaatatacctcctcaa
cttcctgtgcaaggtaccagcttgctacagaatcagattctgttatcaccatcacaggct
gctttgcagggaaccagtctgaatcctgacatcaagggaggtaatcagcaaagcagctta
aattttccagttggagaaaagaaagaaaatgttccaaaagaagagaaaaaaacagacatg
gtgtttacattaggttcaagttcactttctgcagaggagcaattgaagagatttgtcagt
tccagtcaagcgccgagaaatcaggcatactatgttgtggtaaataacggggaggcaaat
gagagagcattctttattgaaccaaacaaaaaagcaaaacctaaaccaggctcagagagg
aaaactgaaacagagaaaacagattcttctgtagctacaaatgaagcagccagatctgaa
caggaagtgaaaccagtgaagtcagaacaagatctaaaaccagtcaaatctgaacaggaa
gtgaaaccagtgaagtctgaacaagatctaaaaccagtcaaatctgaacaggaagaagtt
gtacctgattcctctacagaaggtgacccagaaccacagaacaagttcctaaaattttgc
cagctacctaaaaccccatctaaagtcccggttgccactgtaacacctcagagacaagca
gaacagactgtaacttcagttaaaacagagccagatagccatcataaatctgtacccagc
acttctgatccacatccacccgcgtgtacttcacctgtcctgtttgaagatgttccagtt
gatgtgtcagctggtgctggtgtagataacactagtaatgttgccgacacagaaaatgaa
ctgaacactaagaagaagccaatattcaagaaaaggaactcgctttctacaaaaatgcca
aaagaggatttcatagtacaatctgaaaatgttgaaaagaatgaagtagaaaatttgagg
agagataacaatgttgaaaaagatagtaatgaggtagatggtgccgattcagactttaaa
acagaaagtaatgcaaggacaaaactaacaacaagagggaaagtgaacaggtctgtggta
gataaggtgaagcaaggcaggaagaagtccacagacggaatgatcttacaagatacagct
agggagaatactttagctgaagtagatgggatagcagcttcaggaaatgatgtacattct
gatgaggaattcttgaatacacgaagacgaggcgggagaaaacgtaaatcaacaagcaag
ttcgaggaatggtcaaagagatctaagaaaggcgttatctatgacgatgttgacaacaca
gcagagaaagaaaacgaggttggtagcaaatacttgtcctgtgtgaagtgtggtaaacag
ttattaaaatcttcctatcacgagaaacagaaaaggcatccagaattcctgtcaggggtg
ttcaagaagaacgtagagctcttacattttcctaatgttaaggcggaggaggtactactg
caaacagttgtggcagaagcaagcagcaaaggtttattactaaacagtgtttatgatgat
acggccagatgttgtatacagtaccttgaatgcaaagcctgtaagacagatactgtgatt
ggagctagagttctgctggcagactcaaattccagatataaatttggacagacttggatt
ctctcatcagctgccaaaatatga
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