Mercenaria mercenaria (northern quahog): 123533828
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Entry
123533828 CDS
T07835
Name
(RefSeq) RNA-binding protein lark-like
KO
K13187
RNA-binding protein 4
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmer03041
]
123533828
Spliceosome [BR:
mmer03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
123533828
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_2
zf-CCHC_3
Nup35_RRM_2
RRM_occluded
RBD_DEAH11
RNA_bind
RRM_3
zf-CCHC_5
PTM_DIR17_Tudor
Motif
Other DBs
NCBI-GeneID:
123533828
NCBI-ProteinID:
XP_045171677
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All DBs
Position
1:74415691..74437229
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AA seq
242 aa
AA seq
DB search
MSFRGGRGGGRGGGSGGKKPYTVSTKLYIGNIPETCRRMDLQKLFENYGKVVECDIVKNY
GFVHYEDEDEAKQATAELNNTEFQGSILTVELSHSRVRHKPGMGGKQECYRCGKEGHWSK
DCPKGPSRPKGYSDRGPDPYDYYRDRYPPPPPPDRFRPYPDPYDRRPPLPRDPYAAYPRE
RDPYARPPPEYYGRRDPYAAYDRRSADPYLDDYYRRPAGYLPPPPGTNRLSPPPSRARVA
PY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccgaggtggaaggggtggaggtcgcggtggtggaagcggtggaaagaaacca
tatacagtatcaacaaagctctacattggcaacataccagaaacatgccgaaggatggac
ttacagaaactgtttgagaactatggcaaagttgtggaatgtgacattgtgaaaaactac
ggatttgtgcattatgaagatgaagacgaggcaaaacaggcgactgctgaactgaacaac
actgaatttcagggctctatattgactgtggagctgtcgcacagtagagttagacataaa
ccaggcatgggaggtaaacaagaatgctacagatgtggaaaggagggtcattggtcaaaa
gactgtccaaagggaccaagccggccaaagggctactcagaccgtggaccagatccctat
gactattacagagacaggtacccacccccacctcccccagaccgtttcagaccataccca
gacccttatgacaggaggccaccattgccaagagatccatatgcagcttacccaagagaa
agagacccatacgccaggccacctccagaatactatggcagaagagatccatatgctgcc
tatgacagaagatcagcagacccatatcttgatgactactacagacgaccagctggctac
ttgccgccgcccccgggcacgaatcgattgtcaccaccaccatctcgggcccgcgtagct
ccttattaa
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