Mercenaria mercenaria (northern quahog): 123533888
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Entry
123533888 CDS
T07835
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9-like
KO
K18735
protein SMG9
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123533888
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123533888
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_30
NB-ARC
URGCP_GTPase
GBP
AAA_18
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
123533888
NCBI-ProteinID:
XP_053391123
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MTDSSERDRGRGGPRRRRPRGGGPPVRKERDYDGDTSSSQPTSRPIILAKHPENESSQVS
SSGRGSTSTSPTPSNRQSEKPVTVLKPRGEDSRRTLSSSLSLPSIPVSTVQGETPLQQTF
LQRTIEGTSRLSGPTEMSHCTKLIDEHHQWCETACESLLEQTDFLVVGVIGLQGTGKSTI
LSLLAGNTEIDAHRNYVFPPQSRAIREECGHMTNGIDIFVTSQRVIFLDCQPLLSASVLD
QLIHNEKKIPPEYTTAENFAEIQSLQQVTLLLTVCNVVMVVQDWFTDLSVLHFLQTAEML
KPSTPSSSGHDSNSAPEDHPDYYPHIVFVQNKSGREDFSVENFTAMQKSLSTIFQTSKLK
MKGDVNMTTGRQTFGLNPAFVKSDLNLFVLPCMDGRKDAEDTVLTMLPEYRGYPSFQTLI
NSLRGQILAMPREAITHTTLTEKNWFHYAARIWDSIKKSQLIAEYNRLLP
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacagattccagtgagcgagataggggaagaggaggtccacgccggcgccgtccacga
ggaggcggaccacctgtgcgaaaggagagagattacgatggtgatactagtagtagtcag
ccaacatctagacccattatactggcaaaacacccggaaaatgagtcttcacaggtatcc
tcgtcaggccgtggttcaacatcaacttctcccacaccatcaaatcgccagtcagaaaag
ccagtgacggtactgaaaccacgaggcgaagattcacgtagaaccctgtcatcctctttg
tcattacctagtatacctgtaagtactgtacagggagaaactccactgcagcagacattc
ttacagagaactattgaaggaacaagcagattatctggccctacagaaatgtcccactgc
acaaagttgatagatgaacaccaccagtggtgtgaaactgcctgtgaatcattattggag
caaacagatttcttggtagtgggtgtgatagggttacaaggtacaggcaagtcaaccatt
ctgtcacttctagctggcaatacagaaatagatgctcacaggaattatgtgttccctcca
cagtctagagctattagagaagagtgcggtcacatgactaatggtatagacatctttgtt
acatcacagagggttatcttccttgattgtcagcctttgctgagtgcctcagttttggac
cagttgatacacaatgagaagaaaatacctccagaatacacaacagcagagaactttgcg
gaaattcagagtttgcagcaagtaacactcctgctgactgtatgtaatgttgtaatggta
gttcaggactggtttacagatctgtcagtcctacattttctccagacggcagaaatgttg
aaaccgtctacaccgtcatcatctggacacgacagcaactcggccccagaggatcatcct
gattactatccacatatagtatttgtgcagaataagtcaggaagagaagatttcagtgtt
gagaacttcacagctatgcagaaatctttgtccacaatatttcagacttccaaactgaag
atgaaaggtgatgttaatatgacaactggtagacagacgtttggattgaatcctgcattt
gtcaagtcggatcttaacttatttgttttaccatgtatggatggaaggaaagatgctgaa
gatactgtactgacaatgttaccagagtatagaggatacccaagtttccagacactgata
aactcactgaggggacaaattcttgccatgccaagggaggcaataacacacactactctc
acagagaaaaactggtttcactatgcagctaggatatgggactcgatcaagaagtcacag
ttaattgcagaatacaacaggttgctaccttga
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