Mercenaria mercenaria (northern quahog): 123533920
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Entry
123533920 CDS
T07835
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123533920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmer03041
]
123533920
03110 Chaperones and folding catalysts [BR:
mmer03110
]
123533920
04121 Ubiquitin system [BR:
mmer04121
]
123533920
Enzymes [BR:
mmer01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
123533920
Spliceosome [BR:
mmer03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123533920
Complex C
U4/U6.U5 tri-SnRNP related factors
123533920
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
123533920
Chaperones and folding catalysts [BR:
mmer03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
123533920
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
U-box type E3
123533920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
123533920
NCBI-ProteinID:
XP_053375237
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All DBs
Position
12:14005725..14022105
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AA seq
519 aa
AA seq
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MGKKQHQKDKLYLTTTEWKNEFGGYKGKQLKNQEFRRLPFSCCTLSMQPFENPLCTKDGV
IYDLMNIVPFLKKHGINPATGEKLSAKDLVRLKFHKNADGKYHCPVTFKVFNENTHIVAV
RPTGNVFANEAVERLNIKANFWRDLITDEPFTRKDLITVQDPSNLDKFNIQKFYYIKNNL
KAGEEDEDAAYKDGKSRLKTVNAETQDILETLEREYQAPEKKPENKKKADRFNSAHYSTG
AVAASFTSTAMVPETEHHAAIIDEDIIRYERVKKKGYVRVVTNYGQLNLELHCDMVPKTC
ENFIRLCKKGYYNDTVFHRLIRNFMIQGGDPTGTGTGGESIWGGSFKDEFKPNLTHSGRG
VLSMANSGPNTNKSQFFMTFRSAKHLDGKHSVFGRVVGGLETLDAVEKIDVDKKDRPVKE
IKIEGCAVFVDPFEEVDEQLAKEREEELSRQAQEESEKKKPKSRKEEPNLVPKSFTSGVG
KYINPSTLKRHTTDDTDSSLVTAKKKVKAKSGFGDFSSW
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaacagcatcaaaaagataaactatatttgactacaacagagtggaaaaat
gaattcggtggttacaaagggaagcagctcaaaaatcaagagttccgtagactacccttc
tcctgctgcacgttgtcaatgcagccatttgagaatccactttgtacaaaagatggagtt
atttatgatttaatgaatatagttccatttctgaaaaagcatggcataaacccagctaca
ggtgaaaagctcagtgcaaaagatttggtcaggttgaagtttcataagaatgctgatggg
aagtaccactgtccagttacattcaaggtgttcaatgaaaatacacatattgtagctgtc
agaccgactggaaatgtgtttgctaatgaggctgtagagagactgaacatcaaggcaaac
ttctggagagatctgatcacagatgaaccctttacaagaaaagatctcatcactgtacag
gatccatcaaatctggataaattcaacattcagaagttttattacatcaagaacaatctg
aaagctggggaagaagatgaggatgctgcctacaaggatgggaagagtagattaaagacg
gtcaatgcagagacacaagacattctggagacactggagagagaatatcaagctcctgaa
aaaaagccggaaaacaaaaagaaggctgacagatttaattcagctcactattccacaggg
gcggtggctgcctcatttacctctacagccatggtacctgagactgaacatcacgcagca
attatagatgaggacattataaggtatgagagagtaaagaagaaaggatatgtacgagtt
gttacaaactacggtcaactcaaccttgaactccattgtgatatggttccaaagacttgt
gaaaattttatcagactgtgtaagaaggggtattacaatgacactgtgttccatcgactg
atcagaaattttatgatacaaggaggggatccaacgggcactggaacaggtggagaatct
atatggggaggaagtttcaaggatgagtttaaacccaatctcacacattcaggacgaggt
gttctcagtatggcaaactcgggaccaaacactaacaaatctcagttcttcatgacattc
agatctgctaaacatttggatggaaaacactctgtgtttggaagagttgtcggtggttta
gaaacactggatgctgtggagaaaatagatgttgacaaaaaagacagacctgttaaagaa
attaagatcgaaggatgtgctgtgtttgtagatccgtttgaggaggttgatgaacagtta
gcaaaggagagggaagaagagttaagtagacaggcacaggaagaatctgaaaagaagaag
ccaaagagtagaaaagaggaacccaatcttgtgccaaaatcattcacatcaggagtaggc
aaatatataaaccccagcactttgaaaagacatacaacagatgacacagattcaagtctt
gtgacggcaaagaaaaaagtgaaagcaaaatctggatttggtgactttagttcttggtga
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