Mercenaria mercenaria (northern quahog): 123533939
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Entry
123533939 CDS
T07835
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a-like
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03020
RNA polymerase
mmer03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123533939
09124 Replication and repair
03420 Nucleotide excision repair
123533939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123533939
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123533939
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123533939
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123533939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
DUF6258
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
123533939
NCBI-ProteinID:
XP_045171864
LinkDB
All DBs
Position
12:complement(20824317..20833625)
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AA seq
117 aa
AA seq
DB search
MNAPPTFESFLLFEGEKKIQIEKDTKVPNAAIFTINKEDHTLGNMICTQLRKDPQVLFTG
YKNPHPLEHKVVLRIQTTADYSPQEALTNAITDLISEVSLMEERFREAVRERQEGDI
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcctccaactttcgagtcatttctcctctttgaaggagagaaaaagattcag
atagaaaaggatacgaaggtaccaaatgctgcaatatttaccataaacaaggaggaccat
accttaggaaacatgatctgcacgcaactgcgtaaagacccccaggtgttatttactggc
tacaagaatcctcaccctctcgaacacaaagttgtattaaggatacagaccacagcggac
tacagtccacaggaagctctcactaatgccataacagatctcatctcagaggtgtctctc
atggaggagagatttagggaggcagttagagagagacaagaaggagatatctga
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