Mercenaria mercenaria (northern quahog): 123534377
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Entry
123534377 CDS
T07835
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mmer03037
]
123534377
Cilium and associated proteins [BR:
mmer03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
123534377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
TPR_8
TPR_2
CHAT
TPR_10
TPR_MalT
Rapsyn_N
TPR_16
TPR_14
TPR_11
TPR_19
TPR_NPHP3
TPR_9
RPN7
Motif
Other DBs
NCBI-GeneID:
123534377
NCBI-ProteinID:
XP_045172538
LinkDB
All DBs
Position
12:complement(42775529..42897669)
Genome browser
AA seq
3138 aa
AA seq
DB search
MSTETSNKKRQSERSERPDYSRQSSSGSTASHTQVQVHSGVSAHSQALFLQKVRESSEAV
NRGDYRGAIQAYTEAISLDPANHILYTNRSAAFAKTQQFQKSLLDARKSRELNPKWAKAY
IREGTALQQLGQHADALAAFAAGLAQDNNNTGLLTGLIDAAIKCPLKEKLEPIFQQLQQL
KLDKSPFVIISVIGQELLQAGHYHASTQMLEAALKIGTCSLKLRGSVFSALSSGYWGLGN
IDKAITYMQKDLQVAKNLGDAEGECRAYGNLGSAYFSKGHYKEALSHDRFQLVLAMRLKD
RQTATVALGRLGHVYTAIGDYPNALQSHKQCVLLLKQSNEKLSEAREIGNVGAVYLAMGN
FESAVECHLEHLKIAKSLKNSVEEARAYSNLGSAYHYKRNYEKAIVYHKQVLKVAEQKSD
KSLEARAYAGLGHAARCMQDYNMSKTYHEKQLDNALQTRDRVAEGRACSNLGIIYHQLAE
YDAALKLHKVHLSIAKELSDRASQGRALGNIGNAYCALNQFEQAIKYNKQELAISTEVND
RHSEGSTHGNLAVAYQTLKMYDSAHQHYVAHLNISRELKDSQSEARAVCNLGNFHSSRGE
YTNSIPYYEQYLMLSQELHDSEGEAKACFCLGYAHFALGNFLESVRYYKQDLSIAQELKN
QLGIARAYCNLGLAHKALNSFTEALDCQKKCLNLMTSLKNVKGHFRSLGNIGDILLKTGD
TSEAIKFYNQQLTLAKQCNSQDMLASANGALGSAHRVLAQYDKALAFHTQELSIRQDMND
LKGECRAHGHLGSVHMCLGKYMNAFKCYEEQLEKSRELQDSAMEANACGNLAITKMNMGN
FEEAIGLFEQQLAMLEQVHGNNATFDKGRAFGNLGDCYEALGDFDESIKCHEQYLAIAQN
AGHLSDQDKAYRGLGNAHRSVGNLQQALVCFEKRLVVAHELNSHAAKASAYGELGCLHSL
LGNFEQAISCLQHQLTIAQEMQDSLCEGDAACGLGGVYQQMGEYDKALEYHEMDLKIAEN
TNNTACQCRAYGNLGLSHESLGEYTKAIKYQEQHLSIAAQMNDRVAKTLAYSSLGRVHHA
LNNHKKAVEYLRQGLQIAEQLGRMEDEAKIRHRLGLALWGNNDHEECQQQLYKASELFES
IRRDAQFNSEYKLSLFDLQTACYQALQRVLVTLDRHPEALVVAERACTRAFIDLLMERQA
GSEGFYGNHVTDPPPITTDQILNIVQKQKSMVLYFSVASGFLYSWLLTPRDGIVKFHVTS
MTDIESEVDAGDNISMKSSVSFSACSLLDNMVGQVRESMGVESHAPSGLSRTTPRSVSVE
NDSTSDIEDHFEQQLEELGDKLNAENDRTGFLRIVNRNHLYNSSNYSLGSMFSLNVSLNA
SFPGATISRKNSVRSKFGNKSAVSALYQLLIEPFEESMKEITEDAGSSPSDLILVLQGDL
FLIPFSVLRKDQTMEYLYERFNLIVVPSLTSLQNTSKHDKHGRPVIDSSGAVVVGNPKLT
PSICQHWHLHDIPSSEYEARIVGEILTARPLIGHEATKGAVLNQIEQVEVIHFATHISWK
LSSVILSPGEVPSHPPARFPTIDSDDSASDISSFDGPSLAEYLLTAADILNLKLHAKLVI
LSSGYTDDRAGRINTDGVVGLTRSLLSAGAQSVLYCLWPVPDQASKLLMRTLYIGLQEGK
CVSQALTFAVKTVQSTKQFSHPSNWGGWVLIGQDVKLSSKVAQMGHAICELLQHPNQCRE
AMRVLLHLIEKSLQRIHQGSKNSMYTTAQSIENKVGGLSGWKDLLQAVGFRFEPSLNGLP
PAVFFPQSDPGDRLTQASASLQALLGLPPGSSQALSKFLHNYEAGEAIIRVMRDILSKMA
AKDTNMDVKVNVKLWRVAGCHEFLASLSMDLVEVGNDEVTLRLGKQANKRQLQFALQSLV
AVFDTQEAPCSLNLDSSSSLESLSSSHSGSTSTSNFSKGSTPPISPRGKKKSLFNPAEME
KMRIRNTRMSQGGLTGRKIGPGKSTRAGATDPATYLQYQNQIKYMYRSETLSPPYGNEVS
VVALSDSDTTASPTLGSSSASEKLRDLQNAESFNLSFDGKSDKSSLSGKSDKLHSPDVKS
MQSSLNGDEGDDTSADNETVIIHDESDGSFKRNGENRNSDISDNSSISQGIQADKDLSKL
GSDMSDVSMSEGRLTPKNRQDLENYLQVTDESGIVSENTSSNHSEASQQSEHTSYRFDPS
EIAQKIMSDVSEHKTALDSMQKFSMMQAQAEAHILRTEYQKQNQQVILASSGENNSTAVH
DNVSKEQNTVQSKLAAFSGNNISQSAFTSPSHKSRLPPPVASKPTFQSNTPGVRNSSANV
SNLSAIPKSSSAEALVEQISFSPSSSVQKQSSSSVPVTPVSSSVFTTTAIMVSKQDSFSS
SASAGTTMSFSSFRPGGKPPSAENVASVLHHRPDSTTSTSSYCSTPSSMQSVIYRPYGDK
RIPDSPCVVSYDSSSEQTSGSGSASTITPTVNMTEKADTIQNDVISSLKRDSSPALSSCS
STSGKSGKQKKKVSFSDSEPSDTPSPLDSSASSNQLSYFDLKKSSFGNIPPRTGNMQPQL
QMQKSHQNSSNSSLDSAGKLAAGNSQRPPPPSYQYAIRNSQLLQNKTAKPGILQQSPRQS
YSSNSSLNSSLDEVGRLPPSQTSPVRTSGNQPSFQQQNQSESNSSYILNQSLPAGSSFTQ
NLSQYPNPNQSYPPQNLSNRVPRNQGLSPVRNPGLSPVRSPGISPVRQNPAAPQHISPEQ
TPVIPPRGIAPTTRPNYMKIPDETISPGQQMQSSRSYVSGPITPGQGHMSRGQLLPNQQY
SGSLTHMTAIREQIPSESSSRPNSLQMNNPALSPTKSALVRQPLSPPEGNLSPQEYFPRP
PDQFRGSGYIDNQQGQKSMTNTFSQMNYQRSQSMDFLSRNAQNDQNKLLSQSYEMKDFPS
KFSSSQSLNQISPSHTRNGPPIPSASQIRETLVNRNASANHMYSGQSAANRNTERRNPPV
PPARIDSWENMDKHLNEQRIPHNHVSNHPINNTFQQFYEQSEPTGQKQNGQVVPNNPNKI
VSQNGYLPGREQTNQMFNSQTKVYPMNNSLPQSHHNFANGNIPNLQLNPTNVGPLRRVGI
GSDKKSFAKSNVIQASKC
NT seq
9417 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagagacctcaaataagaaacgccaatcagaaagatcagaaaggcctgactat
tcccgccagtcatcgtcaggatcgacagcaagtcacacacaagttcaagttcattctggg
gtttcggcccacagccaggccctcttcctacagaaggtaagggagagcagcgaggctgtg
aaccgtggagattaccgtggagctatacaagcctacacagaagctatttctctcgatcca
gcaaatcatattctctacacaaacagatcagcagcttttgcaaagacacagcagttccag
aaaagccttctcgatgccagaaagtcaagagaattgaacccgaaatgggctaaggcatac
attcgagaaggaacggctctacagcagttgggccagcatgcagatgcattggctgcgttt
gcagcaggacttgcacaagacaacaacaatactggtcttcttacagggcttatagatgca
gccataaaatgtccgctcaaagaaaaactggaaccaatcttccaacagctacaacagctg
aaactggacaagagcccatttgttatcatctctgtgattggccaggagcttctacaagcc
ggccactatcatgcctcgacacaaatgttggaggcagccttgaaaataggcacctgcagc
ctgaagttaaggggatcagtgttctctgcactcagcagtgggtactggggcctcggaaat
atagacaaagcaattacatacatgcagaaagatttacaagttgcaaagaatcttggagat
gcagagggagaatgtcgtgcctatggcaacctgggttcagcctacttctccaaaggtcat
tacaaagaggctctatcacatgaccggtttcagctggttttggcaatgaggctgaaagat
cgtcagactgcaacagttgctctgggacggcttggtcatgtgtacacagcgattggggat
tacccaaatgcattacaaagtcataaacaatgtgttttattgttaaaacaaagcaatgaa
aaactgtcggaagcacgagaaatcggtaatgtaggtgccgtgtatttagcgatgggaaat
tttgaaagtgctgtagagtgtcatttagaacatctaaaaatagcaaagagtttaaaaaac
agtgtggaggaggcaagagcatatagtaacctcggaagtgcctaccattataagagaaac
tacgaaaaagcaatagtgtatcataaacaggtgttaaaagtagctgagcaaaagagtgat
aaatcattagaagctcgtgcatatgcgggtttggggcatgctgctcgatgcatgcaagat
tacaatatgtccaaaacataccatgaaaaacaattagataatgccctgcagacaagagac
agagtggccgagggtcgagcgtgttcaaatcttgggattatatatcatcagctggctgaa
tatgatgctgcattgaagttacataaagttcatctttcaatcgcaaaagaattaagtgat
cgagcgagtcaaggtagagcattgggcaatataggaaatgcttattgtgcattgaatcag
tttgaacaagcaataaaatataataaacaggaattagcaatatctacggaagtgaatgat
cgccattctgagggttcaacgcatggaaatctagcggtagcgtatcaaacattaaaaatg
tatgacagtgcacatcagcattatgtagctcatttaaatatttcgcgggaactcaaagac
tcacagagtgaagcaagggcagtgtgcaatctgggtaattttcacagttcacgtggagaa
tatacaaactctataccttactatgagcagtatctaatgctatctcaggaattacatgac
tcggaaggtgaggctaaggcctgcttctgtctcggatatgcgcatttcgcacttggaaac
tttttagaatcggtccgatattacaaacaagatctttctatagctcaagaattaaaaaat
cagcttggcattgcccgtgcttactgtaacttaggtcttgcccacaaagctttgaacagt
tttactgaggctttagactgccaaaagaaatgtttgaatttaatgacatctttgaaaaat
gtgaaaggacattttcgatcacttggaaatattggtgatatattgttaaaaactggagat
actagtgaagcaattaaattttataatcagcagttaacgttagccaaacagtgcaacagt
caagatatgctggcgtctgctaatggtgcgctgggttcggcacacagggtgctggcccag
tatgataaagctcttgcctttcacacacaggaattaagtataaggcaggatatgaatgac
cttaaaggcgagtgccgagcacatggacacttgggtagtgttcatatgtgcttaggaaaa
tacatgaatgcatttaagtgttacgaagaacagcttgaaaaaagccgggaactgcaggac
agtgctatggaagcaaacgcatgtggaaatcttgcaattactaaaatgaatatgggtaac
tttgaagaagcaataggtttatttgaacaacagttagcgatgttagaacaagttcatggg
aacaatgcaactttcgacaaaggacgtgctttcggaaaccttggagattgttacgaagcc
cttggtgatttcgatgaatcgataaaatgtcatgaacaatatcttgctattgcacaaaat
gctggtcatttgtctgatcaagataaggcttacagaggtttaggaaatgcacatcggtct
gttggaaatcttcagcaggctcttgtgtgtttcgaaaagagactggtagttgcacacgag
ttaaacagccatgctgctaaggcttcagcctatggggagttaggatgcttgcacagcctt
ctgggtaatttcgagcaagcgatttcctgtctgcagcatcagttgactatagcgcaagaa
atgcaggatagtttatgtgaaggggatgcagcatgtggattgggcggcgtttatcaacag
atgggagaatatgacaaagccctggaataccatgagatggatcttaaaatagctgagaat
acaaacaatacagcctgtcaatgtcgagcatatggtaatcttggactatcccacgagtct
ctgggagagtatacaaaggccattaaataccaggaacagcatctcagtattgcggcacag
atgaatgacagagttgcaaaaactcttgcctatagtagcctaggtcgagtgcatcatgca
ttaaataatcataagaaggcagtggaatatctacgtcaaggtttgcagatcgccgaacag
cttggccgcatggaggatgaagctaagatacgtcatcgcctcggtctcgcactctggggt
aacaacgaccatgaggagtgccagcagcagctatataaggcatcagaactttttgaaagc
atcaggcgtgatgcccagttcaacagtgaatataaactgtccctgtttgatttacagact
gcttgctatcaggcattacagagagttcttgtcacactggaccgacatcccgaagccttg
gttgttgccgagcgagcatgcacacgggcattcatagatctgttgatggaacggcaagca
ggaagtgaaggtttctatggtaaccatgtcacagatcctccaccaatcacgacagatcag
atactgaatattgtacagaaacagaagagcatggttttatatttctcggtggcatcagga
tttctttatagctggcttctgacaccaagagatggtattgtaaagttccatgtgaccagt
atgactgacattgagagcgaagtggatgcaggagataatatcagtatgaaatctagcgtt
agtttctccgcttgctccttgcttgacaatatggttggccaagtacgagagtcgatgggt
gtggaaagtcatgctcccagcggactgtcgagaacaacaccacgatcggtcagtgtggaa
aatgatagtacaagtgacattgaggaccactttgaacaacagttagaagaacttggtgat
aaactaaacgctgaaaatgatcgaacaggatttctcagaatcgtgaacagaaatcacctg
tataatagtagtaattacagccttggcagtatgttcagtttaaatgtaagcctgaatgct
tcttttccgggagctactatcagtcggaaaaatagtgttcgtagtaaatttgggaacaaa
tctgcagtgtcagccctctatcagcttctgattgaacctttcgaagaatctatgaaggaa
attactgaagatgcaggatctagtccatcagatctaattcttgtattgcaaggggattta
tttttgattccattctcagtgctaagaaaagatcaaacgatggaatatttgtatgaacgt
tttaatttaatagtagtgccgtcgttgacttcattgcagaatactagcaagcatgataaa
catggacgccctgtgatagattcttctggtgcagttgtcgttggcaatccgaagctgacg
ccttctatttgtcagcattggcatttacacgatattccttcttcagagtatgaggcaaga
attgttggtgaaatattgacagcaaggcctctgattggacatgaagctacaaaaggggcg
gtacttaatcagattgaacaggtggaagtgatacattttgcaacacatatttcgtggaag
ctttcgtctgtgatattgtcgccaggtgaggtaccgtcacacccgccggcaagattccca
acgatagattctgatgacagtgctagtgatataagttctttcgatggaccatcgttagca
gaatacctcttaacagcagctgatatactcaatctcaaacttcacgccaaacttgtcatt
cttagttccggttataccgatgacagagctgggcgtataaacacagacggagttgttggt
ttaacgcgttcccttctgtcagcgggcgctcagtctgttctttattgtttatggccagta
ccagatcaagcatcgaaacttctaatgcggactttatatattggtttgcaggagggaaaa
tgtgtctcccaagctttaacttttgcagttaaaactgtgcagtcgacgaaacagttttca
cacccatctaactggggcggctgggttttgattgggcaggatgtgaaattgagcagcaaa
gtagcccagatgggtcatgccatttgtgaactacttcagcatccaaaccagtgcagggag
gctatgagagttctccttcatctgattgagaaatctcttcaaagaatccaccaaggttcc
aagaattcaatgtacaccacggctcagtctatagagaacaaagtgggtggcctcagcggc
tggaaggacctactgcaggcagtgggttttaggttcgagccttcactgaacggtctccca
ccagcagtgttcttccctcagagtgatcctggagacagattgactcaagccagtgccagt
ctgcaagctttgctaggtctaccaccaggatcttcacaagctctgtcaaaattcctgcat
aattacgaggctggagaggctatcatccgtgttatgagggatatacttagcaagatggca
gcgaaagatacaaacatggatgtgaaggtcaatgtcaaactatggagagtggcaggatgt
catgagtttttggcctcattaagtatggaccttgtagaggtaggaaacgatgaggttact
ttacggcttggtaaacaggccaacaaacgtcagctccagtttgcactgcagtctcttgtt
gctgtcttcgatacacaggaagctccatgttccctgaacctggacagttctagcagtttg
gaaagtctatcatcatctcacagtgggtcaacatccacttccaacttctccaagggtagc
acaccaccaatatcacccagggggaaaaagaagtccctgttcaatcctgcagaaatggag
aaaatgaggattagaaatactcgcatgagtcagggtggtctcacaggtagaaagattgga
cctggtaaatcaactcgtgcaggggcaactgatccagcaacgtatctgcagtaccaaaac
cagataaaatacatgtatcgatcagaaacactcagtcctccctatggtaacgaggtatct
gtcgttgctctgagcgacagtgacaccacagcaagtccaacattgggaagcagctctgcc
agcgagaaattacgagacttgcaaaatgctgagtcattcaatttaagttttgatgggaag
agtgataagagtagtttaagcggtaaaagtgataaacttcacagcccagatgtgaaaagc
atgcagtcatcactcaatggtgatgaaggtgatgatacgtctgcagataatgaaactgtg
ataatacatgatgaaagtgatggatcgtttaaaagaaatggagaaaacagaaactcagat
atatcagataacagtagtataagtcaaggtatacaggcagataaagatttaagtaaacta
ggatctgatatgtcagatgtgagtatgagtgaaggacgactgacaccaaaaaataggcag
gatttggaaaattacttgcaagttacggacgaatctggaattgtgtctgaaaacacatcg
tcaaatcatagtgaagcatcgcagcaaagtgagcatactagttacaggtttgatccatct
gaaatagcacagaaaataatgtctgatgtttctgaacacaaaacagctctagactccatg
cagaaatttagtatgatgcaggctcaagcagaagcccatattttgcgaactgaatatcag
aaacaaaatcaacaagtgattcttgcatcttcgggtgaaaataattcaactgccgtgcat
gataatgtctcaaaagaacaaaacacagtgcaatcaaaattagcagcattttcaggaaac
aacatcagtcagtcagctttcactagtccctctcataaaagccgactgcctccaccagtt
gcttcgaaaccaacattccaatcaaacacgcctggagttcgtaactcgtcagcaaatgta
tcaaacttatctgccattccaaaatcatcatcagcagaagctttagttgagcagatatca
ttttctccgtcttcatctgtacagaaacagagtagttcatctgttccagtgacgccagtc
tcatccagtgtatttacaacgactgctattatggtaagcaagcaggacagtttctcgtct
agtgcaagtgccggcactacgatgtcatttagttcatttcgacctggtggtaaaccccct
tcagccgaaaatgttgccagcgttttgcatcaccgccccgacagcaccaccagcacaagt
agttactgttcgaccccatcctccatgcagtctgttatttaccgaccatatggagacaaa
cgcatacctgattcaccctgtgtagtttcctacgattcttctagtgagcagacgtctggg
tcagggtcagcaagcactatcacacccactgtaaatatgacagaaaaagctgacactatt
caaaatgacgtgatttctagtttgaaacgtgactcatctccagctttaagttcctgctca
tcaacgtctgggaagagtggcaaacagaagaaaaaagttagcttttctgattcagagcca
tcagacaccccttcacctttagattcaagtgctagttcaaaccaactttcttacttcgat
ttgaaaaagtctagttttggaaatattcccccacggactggaaatatgcagccacaatta
caaatgcaaaaatctcaccaaaactcatcaaatagttcattagacagtgcaggtaaatta
gctgctggcaattctcaacgtcctccgccacctagttaccaatatgcaatcagaaactcg
caacttctgcagaataaaactgcaaagccaggaattttacaacagtcgccgagacaaagt
tattcgtctaactcatcactcaacagttcactggatgaagtcggtcgtctacctcctagt
cagacgtcacctgttagaacatcaggaaatcagccaagctttcaacaacaaaatcagtca
gaatcaaatagctcatatattttgaatcagtctttacctgcagggtcctcatttacacag
aatttaagtcagtacccaaatccaaaccaaagctacccaccgcagaacctttcaaataga
gtacccagaaaccagggtttgtcaccagtaagaaacccaggcctttctcctgtgagaagt
ccaggtatatctccagtgagacaaaatccagctgccccgcaacacatttcaccagagcag
acgccagtcataccaccaaggggaatagctcctacaactagaccaaattacatgaaaata
ccagacgaaacgatatcacctggacagcagatgcaaagttcaaggtcatatgtgtctggt
cctattacaccaggccaaggacacatgtcaagaggacagctgcttccaaatcagcagtac
tcgggctcattgacgcacatgacagctatcagagaacaaattccaagtgaaagcagtagt
agaccaaactctttgcagatgaacaatccagccctttcaccaacgaaatcggcgttggta
aggcagccattatctccgccagaaggaaatctttcaccacaagaatattttcctcgtcca
ccggaccaatttcgcggatctggttacattgacaaccagcaaggtcaaaagagtatgaca
aacactttcagtcaaatgaactatcaacgcagtcagtctatggactttttaagtagaaac
gctcaaaacgatcaaaataaactattgtcgcagagttatgaaatgaaagattttccatca
aaattctcaagttctcagtcacttaaccaaatttctcccagtcatacaaggaatggtcct
cctattccgtctgccagtcagattcgggaaacactagttaacagaaatgcgtcagccaat
catatgtattcaggccaaagtgcagccaatagaaatacagaaagaaggaatccaccagtt
cccccagctcggatagacagttgggagaatatggacaaacatttaaatgaacaaagaata
cctcataaccatgtatcaaaccatccaataaacaatacatttcagcagttctatgaacaa
agtgagcctactggacaaaagcaaaatggacaagtagtaccaaataacccaaataagatc
gtcagccaaaatggatatttaccaggaagggaacaaacaaaccagatgttcaacagtcag
acaaaagtatatccaatgaacaactctctaccacaaagccatcacaatttcgcaaatgga
aatataccaaatcttcagttgaatccaacaaatgtcggtccattacgtagggtagggata
ggatcggataagaaaagttttgccaaatccaatgtgattcaagcatccaaatgttaa
DBGET
integrated database retrieval system
