Mercenaria mercenaria (northern quahog): 123534828
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Entry
123534828 CDS
T07835
Name
(RefSeq) syntaxin-like isoform X1
KO
K04560
syntaxin 1A
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
123534828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123534828
Membrane trafficking [BR:
mmer04131
]
SNARE
Syntaxin (Qa)
Stx-PM
123534828
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Lzipper-MIP1
DUF6584
Ntox34
HB_LcnD
Vac_Fusion
MCPsignal
Tlp
ChrB_N
CCDC28
FUSC
FapA
Motif
Other DBs
NCBI-GeneID:
123534828
NCBI-ProteinID:
XP_045173196
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All DBs
Position
12:50735250..50837042
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AA seq
290 aa
AA seq
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MTKDRLPALKATQSDDDDTEEVQVGVDSGGFMDEFFAQVEEIRQMIDKIASNVEEVKMKH
STILSAPHTDDKTKEELEELMNDIKRTANKVRAKLKVIEQNIEQEEHSSKSTADLRIRKT
QHATLSRKFVEVMNDYNACQIDYRERCKGRIQRQLEITGKTTTNDELEDMLESGNLQVFT
QDIIMETQQAKQTLADIEARHADIMKLEKSIQELHDMFMDMAMLVEQQGEMIDRIEYNVE
QAVDYVETAKMDTKKAVKYQSKARRKLIFIIICVVVLIAILAIILITSLT
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaccgcctgccggccctgaaagcgacccagagtgatgatgatgatacggag
gaggttcaggttggggttgactccggcggcttcatggacgagttcttcgcacaggttgaa
gaaatccgtcagatgatagataagatagcgtccaacgtggaggaagtcaagatgaaacat
agtaccatattatcagcgcctcatacagatgataaaactaaagaagaattagaagaatta
atgaatgacattaaaagaacagcaaataaagttagagccaaattaaaggttattgaacaa
aatatagaacaagaggaacactcaagtaaatccactgccgatctccgaatacgcaaaaca
cagcacgctacattatcacgtaaatttgtcgaagttatgaatgattacaatgcgtgtcag
attgactacagagaacgatgcaaagggagaatacaacggcaactggaaataactggtaaa
acaacaaccaatgatgagttagaggatatgttagaatctggcaacttacaagtatttacg
caagatattataatggaaacgcaacaggcaaaacaaacattagcagacatcgaggcacgg
catgcagatattatgaaattagagaaaagtatacaagaattacacgatatgtttatggat
atggcaatgttagttgaacaacaaggtgagatgatagacagaatagaatacaatgttgaa
caagctgtagactatgtagaaaccgccaaaatggacacgaaaaaagctgtaaaataccaa
agcaaggctcgacggaaactcatttttataataatatgtgtagtagtactgattgctatc
ttagcaataattttaataacatcgctgacctag
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