Mercenaria mercenaria (northern quahog): 123535411
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Entry
123535411 CDS
T07835
Name
(RefSeq) tropomyosin-like
KO
K10373
tropomyosin 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04814
Motor proteins
mmer04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
123535411
04820 Cytoskeleton in muscle cells
123535411
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mmer04812
]
123535411
04147 Exosome [BR:
mmer04147
]
123535411
Cytoskeleton proteins [BR:
mmer04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
123535411
Exosome [BR:
mmer04147
]
Exosomal proteins
Exosomal proteins of microglial cells
123535411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CBM_14
Laminin_II
EzrA
AAA_13
DUF4164
PPP1R21_C
DUF16
PUMA_CC
Fib_alpha
Uso1_p115_C
CENPH
CENP-Q
Baculo_PEP_C
Fez1
DUF4200
DUF745
TACC_C
Golgin_A5
ATG16
HAUS-augmin3
Syntaphilin
DUF3450
Med11
ERM_helical
DUF724
Laminin_I
Crescentin
Spc29
CortBP2
BST2
FBPase
Occludin_ELL
FapA
Spectrin
APG6_N
SH3BP5
Motif
Other DBs
NCBI-GeneID:
123535411
NCBI-ProteinID:
XP_053374898
LinkDB
All DBs
Position
12:complement(6776033..6792350)
Genome browser
AA seq
283 aa
AA seq
DB search
MHRLGVNGKMLRIVRAVYEHVRFRTRHCSTYSDFMDVDDGLEQCEICSPFPKNVPTPCGN
LTESYEISDGRYGDLDNYEETIRDLTNRLKDAEYRATEAERVVSKLQKEVNRLEDELLAE
KEKFKAISDELVKTLHEVAGKMNNLVICIVVLSAIVGYASADQFCCNSFAICVDGQYSIF
DCSGNMTYNKETGICDDPKNVPPPCGSLIDYTESPDGLNDILGSFEATIHECTQRLKIAE
DRVSNAERVIIKLQKEVDRLADELLAEKLKYSDELEQMISELA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcatagattaggcgtaaatgggaaaatgttacgaattgtgcgagcagtgtatgagcat
gtgagatttcgtacacgacattgtagcacttactccgattttatggatgttgatgatggt
ttagaacaatgtgaaatttgttctcccttccctaagaacgtgccgacaccgtgtgggaat
cttactgaaagctacgaaatttcagatggacgttacggcgatttggacaattatgaggag
accatccgcgacttgaccaatagactcaaggatgcggagtatcgtgctactgaggctgaa
cgtgttgtcagcaagctgcagaaggaagttaacagattagaagatgaattacttgctgaa
aaggagaagttcaaggcaatcagtgacgaattggttaaaacacttcatgaggtagctggc
aaaatgaataatcttgtgatctgcatcgtggtactttcagctattgttggttatgcatcg
gcagaccagttttgctgcaactctttcgcaatatgcgtagacggccagtactctatattt
gactgttcaggaaatatgacgtataacaaggaaactggaatttgtgatgaccctaagaac
gtgccgcctccgtgtggaagtcttattgactacaccgaatctccagatggacttaacgac
attttgggcagttttgaggcgaccatccatgaatgtacacagagactcaagattgcagag
gatcgggtttctaatgctgaacgtgttattatcaagctgcagaaggaagttgacagatta
gcagatgaattacttgctgaaaagctgaagtacagtgatgaactggaacaaatgatttct
gagttagcttaa
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