Mercenaria mercenaria (northern quahog): 123535476
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Entry
123535476 CDS
T07835
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmer03016
]
123535476
Enzymes [BR:
mmer01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
123535476
Transfer RNA biogenesis [BR:
mmer03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
123535476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Peptidase_C65
Flavodoxin_NdrI
Hydrolase
Motif
Other DBs
NCBI-GeneID:
123535476
NCBI-ProteinID:
XP_045174102
EnsemblRapid:
LOC123535476
LinkDB
All DBs
Position
12:complement(39665513..39685558)
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AA seq
730 aa
AA seq
DB search
MLEKLLTSVVSDTFQIPVWTVVLATVCILWLVWERKKPPKSQINTEQVKENVPHNAPSPS
STGTENVALKKKYDVSKFVRLKLKVFYGSQTGKAKVFASQLCDEVTKKGYIVELIDLNKY
DPEDNLADESTDTVCVFILSTYTEGTPTESAAWFYKWLEETSTDFRVEKTLLKNLQYCVF
GLGNSLYTDHYNVVGKNIDKWLHSLSAMRVMPLGMGDEDVVNSKHGGIEEDFRAWRKIFW
RKAGPILTGRKQLTPNTTGGKKEKGKCGGKCKCKEDGGKCSSDEEPASEDELYETTTDEE
ADDTVENEEGVTQNSSGVVDLEDLGKVMKKMKTAKVHRKAEEEAAMNGTEKKEMVTPQLR
KALVKQGYKIVGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCV
FCWRHHTNPVGTEWRWQMDDPEVVFNGALENHVNMIKQFKGVPGVQPDKFEEGKQPQHCA
LSLVGEPIMYPEINKFIDLLHDKQISTFLVTNAQFPEAIKNLSPVTQLYVSVDASTKDSL
KKIDRPLFKDFWERFLDSLKELSDKGQRTVYRLTLVKAFNTDEIENYAKLVALGNPDFIE
IKGVTYCGDSKASSLTMSNVPWHEEVVGFVKQIADELPDYEIASEHEHSNCILLAHKRFK
VDGEWWTWIDYPKFHELVRKHRESNGKQSFSAKDYMAKTPHWAVFGAKEQGFDPKETRYF
RKSKKDIGGC
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaaagctattgacatcagttgtaagtgacacattccagatcccagtatggaca
gtagttcttgcaacagtttgtatactttggctggtgtgggagcggaagaaaccccctaag
tcacagatcaacacagagcaagtgaaagaaaatgtgccacacaatgctccgtcgccatca
tctacagggacagaaaatgttgcactgaagaaaaaatatgatgtatcaaaatttgttcgt
ctaaaattgaaggtattttatggctcacagactggaaaagctaaggtttttgccagccag
ctgtgtgacgaggtaacaaagaaaggatacatagtggaactgatagatctaaacaaatat
gatcctgaggataacttagctgatgaaagtacagacacagtttgtgtatttatcctgtcc
acatacacagagggtacccctacagaaagtgcggcctggttttataaatggttagaggag
acttcaacagatttccgtgtagagaaaacactactgaagaatctgcaatactgtgtgttt
ggtctagggaactccttgtacacagaccattataatgtggttggtaagaatattgacaaa
tggttacacagcttatctgcaatgagagttatgccccttggtatgggagatgaagatgta
gttaatagtaagcatggaggtatagaagaagactttagagcttggcgtaaaatattctgg
cgtaaagctggaccaatattgactgggagaaaacagctgactccaaacacaacaggtggg
aagaaagaaaagggaaaatgtggtgggaagtgtaaatgtaaggaggatggtggtaaatgt
agcagtgacgaggaaccggcgtcagaagatgagttgtacgagaccactactgatgaggaa
gcagacgacactgtagaaaatgaggagggagtaacacagaacagctcaggtgttgttgac
cttgaagatcttggaaaggtcatgaaaaaaatgaaaactgccaaggtgcatagaaaagct
gaagaagaagctgcaatgaatggtacagaaaagaaggagatggttaccccacagctaagg
aaagcccttgtcaaacaggggtacaagatagtaggctcacactcaggtgtgaaactctgc
aggtggacaaagtcaatgttacgaggtagagggggttgctacaagcatacattttatgga
atagagagtcacagatgtatggagaccacgcccagtcttgcctgtgccaataaatgtgtc
ttctgttggagacatcacacaaatccagttggcacagaatggagatggcagatggatgac
ccagaagtggtatttaatggtgctctagaaaatcatgtcaatatgattaaacagtttaaa
ggtgtgccaggtgtccagccggacaagtttgaagaaggaaagcagccacagcactgtgcc
ttatctcttgttggggagcccatcatgtacccagaaatcaacaaatttatagatctgcta
catgataaacagatttcaactttccttgttactaatgctcaattcccagaggcaataaag
aatttgtctcctgttacgcagctgtatgttagtgttgatgccagtacaaaagatagcctg
aagaaaattgatcgtccattgtttaaagacttctgggaaagatttctagatagcttgaag
gagctgtcagataaagggcagagaactgtgtacaggttaactcttgtgaaggctttcaat
acagatgagattgaaaattatgcgaaacttgtagcactgggaaaccctgattttattgaa
attaagggtgtgacatactgcggagattcaaaggcatctagtcttaccatgagtaatgtc
ccctggcatgaggaagtagtcgggtttgttaaacagattgctgatgagctgccagactat
gagattgcttcagaacatgagcattctaactgtatcctcctagcacataaaaggtttaag
gtagatggagagtggtggacgtggatagactatccaaagtttcacgagcttgttaggaaa
catagagaaagcaacggcaaacagagcttctcggcgaaggactatatggctaaaactcct
cactgggcagtgtttggtgctaaagaacaaggctttgatccaaaagagacaagatacttt
agaaagtcaaagaaagacattggtggttgttga
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