Mercenaria mercenaria (northern quahog): 123535568
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Entry
123535568 CDS
T07835
Name
(RefSeq) caprin-1-like
KO
K18743
caprin-1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123535568
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
123535568
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
Zw10_N
Motif
Other DBs
NCBI-GeneID:
123535568
NCBI-ProteinID:
XP_045174193
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All DBs
Position
17:982124..1005385
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AA seq
676 aa
AA seq
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MPSASTKVEIPASSEALDPFKRVLTVVDKKVRNLEKRKLKLDTLKQKKDSGADLEKDQQV
AVDRYGEVIQNLEFARDLQKQFQAISADVEKLLKKQAKRGKSEKQLQEVKRVKEVLQLQG
LLDNLGSEKVRQDFQTGKHGAIVLTEENLDQLDELYKMISPTRDGETDYLESLSEASEHI
VCLLDAKDKPVVGTTSYKELKELLDLISQCGYFEKAQATEEGVKEGGDAEFEVVEHTDVP
APDSEEVQSSLPPEVPAEDTETEPVATGQQIMNNDTLNTQPQVITAQADVFFNTPVSSQT
VEQQQAELAALSQQQRRPFQEIVSSVQGNFNFLQESTIEVEAKREFSPHMDPAVVAAHPM
PQSQQPLGRPPSNQTPDSSSLPQTGFSSASTFAEQQSAFGDQQSLDSELSVSKVTHGGSV
DKSVYSQANVAPSQDFSGSAFTQSNLSHSLQTDSLFSGTVSAGDSNTGNRGMMGKGETTS
HTQYEIPPQLPMPPGHEQSAQDNQQQSDPEKKDFPMNPNATEFQSLIYNQSGEEAESGNK
SSNDGFQGGTYSNSGYSQGPREQRGGRGGFRGGRGGNRGGNMSNGYSRGGRGNYQGYPPR
DNYRPDGFQGGYSGSNYNNGGFQKRGDSGRGGSSRGGNRGGGQRGGFNRGGGGGGRGSAR
GTGQGFGRPNFNQQQQ
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgcctctacaaaagttgagattccggcctcttcggaggccctcgaccctttt
aaaagggtccttacagtcgtcgataagaaagtccgtaatttggaaaaacgtaagttgaaa
cttgacacgttgaagcagaagaaggactctggtgcagaccttgaaaaggaccaacaggtt
gcagtagaccggtatggagaagttatacagaatctggagtttgcccgtgacctccagaaa
cagttccaggccatcagtgcagatgtggagaagttgttgaagaaacaagcaaagcgagga
aagtctgagaagcagttgcaggaagtgaaacgagtcaaggaagttctgcagttacaaggt
ctccttgacaacctaggctcagaaaaagtgcggcaagactttcagacaggaaaacatgga
gccattgtgttaacggaagaaaatctggatcagttagacgaattgtacaaaatgatcagt
ccaaccagagatggcgagacagattacctagagtcattgtccgaggcatcagaacatatt
gtatgtctgctagatgccaaggataaacccgttgttggaactacatcatacaaggaactg
aaagaattactggatctgatctcacagtgcggttattttgagaaggcacaggctacagaa
gaaggggtaaaggaaggaggtgatgccgagtttgaggttgtagaacacacagatgtgccc
gcacccgactctgaggaagtccagtcatcattaccgccagaagtaccggccgaagataca
gaaactgaacccgtcgcaacaggacaacaaataatgaacaatgacaccttaaatacacag
ccacaggtaatcacagcgcaagcagatgtattcttcaacacaccagtatcgtctcagacg
gtagaacaacagcaagccgagcttgcagccctctcacagcagcagagacgtccattccag
gaaattgtctcctccgttcagggaaactttaactttctgcaggaatctaccattgaggtg
gaggctaaaagagaattctccccacacatggatcctgcagttgttgcagcccatcctatg
cctcagtcccaacagcctctcggacgacccccatcaaaccagacaccagactcgtccagt
ctaccacagacaggcttcagcagtgcatcaacgttcgcggaacaacagtcagcatttggt
gatcaacagtcactggactctgaattatcagttagcaaagttacccatggagggtcagtt
gataaaagtgtttactcacaagctaatgtggctccgtcacaggacttctcaggctctgca
ttcacacagagcaatttatctcattctttacaaactgacagtttgttttcgggcacagtg
tcagccggtgattcaaatacaggaaacaggggcatgatgggtaaaggagaaactacatca
catacacagtatgaaattccaccacaattacctatgccgcctggtcatgaacagtcagct
caggataaccagcagcagtcggatccggagaagaaagatttcccaatgaatcccaatgca
acagaattccagtcccttatttataatcaatcaggcgaggaagccgagtctggcaataaa
tcatctaatgatggctttcaaggtggcacatattccaacagtggttacagtcaaggtcca
agagaacagcggggtggtcgaggaggtttccggggtggcagaggtgggaaccgtggtggt
aacatgagtaatggttacagcagaggtggcagaggtaattaccaaggctatccacccaga
gataactaccgacctgatggtttccaaggaggctacagcggaagcaactacaataatgga
ggattccagaaacgtggagatagtgggcgcgggggatcatctagaggtggtaatcgagga
ggtggacagcgtggcggattcaatcgtggaggtggtggtggtggtagaggttctgctaga
ggaacaggtcaagggtttgggcgccccaacttcaaccagcagcagcagtag
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