Mercenaria mercenaria (northern quahog): 123535907
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Entry
123535907 CDS
T07835
Name
(RefSeq) farnesyl pyrophosphate synthase-like isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer00900
Terpenoid backbone biosynthesis
mmer01100
Metabolic pathways
Module
mmer_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
123535907
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mmer01006
]
123535907
Enzymes [BR:
mmer01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
123535907
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
123535907
Prenyltransferases [BR:
mmer01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
123535907
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Chordopox_A20R
Motif
Other DBs
NCBI-GeneID:
123535907
NCBI-ProteinID:
XP_053385269
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All DBs
Position
17:complement(25726073..25745899)
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AA seq
372 aa
AA seq
DB search
MTTVHQSTDQDIRLTNGCGSDHSGEKKQKMSTDLEQFDEIFPELVGLLVNAELEDPERKD
ASRWFKEVLEYNVPHGKKNRGMFVVMAYKYLKEQPKEGDIKIARILGWCIELLQAFFLVE
DDVMDQSYTRRGQPCWFRKENVGLEAINDGVYLESCIYKILKHYIRDKPYYINIIELFHE
ITHCTITGQCLDMTVSPPAGTVDFSRYTIEKYNAIVKWKTAFYSFYLPVAIAMYMAGISD
DFNHKCAKDILLKMGEYFQVQDDFLDCYGDEAVIGKIGTDIQDNKCSWLVIKALQKASPE
QLNLLKENYGSSDETKVVKVKALYKELKLEQEFRDFEESSFQEILELIEKCSGDLPKDMF
KAFVQKIYKRNK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgtccaccagtctactgatcaggatatcagattgactaatggatgtgggtct
gatcacagtggtgagaagaagcagaagatgtcgactgaccttgagcaatttgatgagatt
ttccccgaacttgtagggttgctggtaaatgctgaactagaagacccagaaagaaaagat
gctagtaggtggtttaaagaggtgcttgaatacaatgttccacatgggaagaagaatcga
ggaatgtttgttgttatggcatataaatatcttaaggaacaaccaaaagagggtgacatc
aaaattgcaaggattcttggatggtgtattgaattgttgcaagctttttttctagtggag
gatgatgtaatggaccagtcatatacccgacgaggacagccttgctggtttaggaaggaa
aatgttggactggaagcgatcaatgatggtgtatacctcgagtcatgtatatacaaaata
ctcaaacattatattcgagataagccatattatatcaacatcatagaacttttccatgag
attactcactgtacaataacagggcagtgtttagacatgacagtttccccacccgctggg
actgtagacttcagtagatacactatagaaaaatataatgctattgtgaaatggaaaact
gccttctactcattctatctacctgtggcaattgcaatgtatatggcaggcatttcggat
gatttcaatcataaatgtgccaaagatattttattgaaaatgggagaatatttccaagta
caggatgacttcttagattgttatggagacgaggctgtgatagggaagataggaactgac
atacaagacaacaagtgtagctggctagtcatcaaagcattacagaaagcttcaccagaa
caactcaatcttcttaaggaaaactatggaagctcagacgagacaaaagttgtcaaagtg
aaagcattgtacaaggagctaaaacttgaacaagagtttagagactttgaagaaagtagt
tttcaggaaatcttagagcttatagaaaagtgtagtggagatttaccaaaagacatgttt
aaagctttcgttcaaaagatttacaagagaaataaatag
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