Mercenaria mercenaria (northern quahog): 123536025
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Entry
123536025 CDS
T07835
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 3-beta-1-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03440
Homologous recombination
mmer03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123536025
03460 Fanconi anemia pathway
123536025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmer03032
]
123536025
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123536025
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
123536025
DNA replication proteins [BR:
mmer03032
]
Eukaryotic type
DNA Topoisomerases
123536025
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
123536025
FA (Fanconi anemia) pathway
123536025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
123536025
NCBI-ProteinID:
XP_053384624
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All DBs
Position
17:1446584..1473656
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AA seq
843 aa
AA seq
DB search
MRTVLMVAEKPSLAQSIAKILSNGNMTSRKGSNGACSVHEYRAKFYPINETASFKMTSVC
GHVFGLDFIGKYNNWDKVDPVELFNATTQKKEATEKLHMPSFLQKEARGVDYLVLWLDCD
KEGENICFEVIDCVKGVMNRNVGGQTIWRSHFSAITDTDIRRAMNNLGVPNENESLSVDA
RQELDLRIGCAFTRYQTKYFQGKYGDLDSTLISYGPCQTPTLGFCVDRHDKIQSFKPETY
WVIQVQVSCEGAERTLNLDWDRVRIFDKEVAQMFMGLIKASDTARVTDITKKEKTKARPQ
ALNTVEMLRVASSGLGIGPQQTMQIAERLYTQGYISYPRTETTQYPENFDLVGTLKQQQN
HPDWGSAVRDLLNDGIQKPKKGSDAGDHPPITPMKSATESELGHDAFRLYDYITRHFIAT
VSPDCRYLQTVVYFEVGGEHFSFTGKQLIDPGYTSLMTWQALSSDEKVPDLKREQQCPVN
DVKLVERQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICERNYVTIQSGRKLKPTT
LGVVLVHGYQKTGLPMGKANYQAVFYKHGISIFHLKFKYFVQNIAGMDELFEVSFSPLAA
SGKPLSRCGKCRRFMKFIQAKPSRLHCSSCDETYNVPQNGNIKLYKELKCPLDDFELVLW
TTGAKGKTYPLCPYCFNNPPFKDMRKGQGCSECTHPTCQHSVAHTGVSECVECENGVLVL
DVTSGPKWRMACNKCNVVINFFENAHKVSLSEDSCEDCGSNLMEVDFSKGKTPLEDGKTE
HTGCVFCDPILKNLVEKHHAKMRVRSAASRGRGGRGRGRGGRGRGRGRGKPKDKMAQLAA
YFV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacagttttaatggtggctgaaaagccatctttagcacagtcaattgctaaaatc
ctgtcaaatggaaatatgacctctagaaaaggatctaacggagcatgctccgtccacgaa
tacagagccaagttctatccaataaatgagacggcttcttttaaaatgacatcggtctgt
ggccatgtgtttggtttagattttattggaaaatacaacaactgggataaagtagatcca
gttgaactgtttaatgccaccactcagaagaaagaggccacagaaaaattacatatgcca
tcctttcttcagaaagaggcacgcggtgtagattatcttgtgctgtggttagactgcgac
aaagaaggggaaaacatttgttttgaagtgatagactgtgttaaaggtgtgatgaacaga
aatgtagggggacagacaatctggagatcacatttcagtgcaattactgacacagatatt
agacgagcaatgaacaacctgggtgtgccaaatgagaatgagtctctgtccgtggatgcc
aggcaggaactggatcttaggataggatgtgccttcactcgataccaaacaaaatacttt
caggggaaatatggtgacctagacagcacactgatttcgtatggtccctgccagacaccc
acactagggttctgtgtggacagacatgataaaatacagtcattcaaaccagaaacatac
tgggtgattcaagttcaggtgtcatgtgaaggtgcagaaagaacattaaatcttgactgg
gatcgtgtgaggatatttgacaaagaagttgctcagatgttcatgggtcttattaaagct
tcagatacggcaagagttacagacataacaaagaaggaaaaaacaaaggccagaccacag
gctctgaatacagtggagatgttaagagtggccagttctgggttaggtattggaccacaa
cagacaatgcagattgctgagagactgtacacacaaggttacatcagttatccaagaaca
gaaaccacacagtacccagagaactttgaccttgttggaacattgaagcagcagcagaac
catccagactggggtagtgctgttagagatctactcaatgatggaatacagaaaccaaag
aaaggcagtgatgccggggaccatccacctattacacctatgaaatcagcaacagagagt
gagctgggacacgatgcattcagactgtatgactacatcactcggcattttattgctaca
gtcagtcctgactgtaggtatctacaaacagtagtgtattttgaggtgggtggggaacat
ttctccttcacgggcaagcagttgatagatcctggctacacaagtttgatgacgtggcaa
gctctctccagtgatgaaaaagtgccagacttaaagagggaacagcagtgtcctgtcaat
gatgtaaaattggtagaacgacaaaccagtccaccagattacctgactgaagcagagttg
atcacactcatggagaagcatggaattggaactgatgccagtatacctgtccatattaac
aacatctgtgagagaaattatgtaaccatccaatctgggaggaagttaaaacctacaaca
ctgggtgtagtgctggttcatggatatcagaagactggattgcccatggggaaagcgaac
taccaggcagtgttttacaaacatgggatcagtatatttcacctgaagtttaaatatttc
gtacaaaacattgctggaatggatgaattgtttgaagtctcattctcaccattggcagct
tctggaaagcctttgtcaaggtgtggtaaatgtcggaggtttatgaaatttatacaagcc
aaaccaagtcggctacattgttcttcatgtgatgagacatataatgtcccacaaaatggc
aatatcaaattgtataaagaactgaaatgtccacttgatgattttgaattggtgctatgg
actacaggagccaagggcaagacatacccactgtgcccgtactgtttcaacaatccccct
ttcaaggatatgaggaaaggtcagggctgtagtgagtgtacacatccaacatgccagcac
tctgtagctcatacaggtgtgtctgaatgtgtcgaatgtgagaatggagtacttgttctc
gatgttacgtcagggccaaagtggagaatggcttgtaataagtgcaatgttgtaataaac
ttttttgagaatgctcacaaggtgagtttatcagaagattcatgtgaagactgtggttct
aatctcatggaagtggacttcagcaagggtaaaactcccctggaagatggtaaaacagag
catacaggatgtgttttctgtgacccaatcctaaagaaccttgttgagaaacatcatgcc
aaaatgcgggtacgatctgctgcaagtcgaggtcgtggtggtcgtggacgagggcgggga
ggtcgtggcagaggaagggggcgtggcaaaccaaaagacaaaatggcacagcttgcagca
tattttgtataa
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