Mercenaria mercenaria (northern quahog): 123536033
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Entry
123536033 CDS
T07835
Name
(RefSeq) rab11 family-interacting protein 1-like isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123536033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123536033
Membrane trafficking [BR:
mmer04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
123536033
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
123536033
NCBI-ProteinID:
XP_045174744
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All DBs
Position
17:48184281..48236837
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AA seq
646 aa
AA seq
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MTWEPTHVQLTVLRARNLVGKIKGKNIAKITDVFVTIALGKEKFQTSTVKYGGKVNNSVE
WFEECDLSIPHMSAEVEVQVMNRGLLSDEFIGYVSVPLKQYDVYERPRSHWVQLGQKPSK
LPDGRCRGELEIRLTFHVRSKTDDSSSTGSLKTKRSGSIKTLVSAMGDKFSRRLSLRGSR
EFFTPQPHKPFKNVSTKTTPYSGDIIPTNNPVKFEAVDLYVPEQCWRENEFENDLIFKKV
VTKEGDGNFARSYSLTSDKRRNNRDFKSRSLMELPGERSFTLPSRGRSKQRPSLDDSALG
QSHTSSRSSRSSVTSQDGYLENMFRKECEVDDRMNDIYNDNIEEESEGEYEQTRRRSAQV
LDESLETETESEMSESDSDNDQITLPKVKLKTSISAPLEGSVRENNELQKTAAEDTDESR
EIHSIVSQCHSLDSETGNRYKREGEVFDGTVSPSEYTSELDRVIAREQSRNKSNTLNSQG
TSDGHTSSHTSSSSISYQGKSAAERAFDRGSTDSVSASSRKKISPKAEFSFTSQTSNEDT
RPQRKKSRQYVKGGRRYTVQGLEGLSTHRSAPDIRDQRPVLNREDSVPGDLMAVYKNMNR
EELIKLVVTHKAQLIRKDQYIKELENYIDNLLVRVMESSPRILQNL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgacttgggagcctactcatgtacaattaacagttcttagagctagaaatcttgttggg
aagataaaaggaaagaatattgcaaagattacagatgtatttgtcactatagctcttgga
aaggaaaagttccagacctccactgtgaaatatgggggcaaggtcaacaacagtgtggag
tggttcgaggagtgtgatctatcaatacctcacatgtcggctgaagttgaggtccaggtg
atgaacagaggtctcctttcagatgagtttattggctatgtctcagttccattgaagcaa
tatgatgtctacgaaaggcccagaagccattgggtacagcttggtcaaaagcccagtaag
ttaccagatggtagatgtcggggagaactggaaatacgccttaccttccatgtgaggagt
aaaactgatgactcttcatctactggaagtctgaagaccaagagatctggttcaataaaa
actcttgtctcagctatgggagacaagttttcgagacggttatcattgcgtggttctcgg
gaattcttcaccccacagcctcacaaaccctttaagaatgtctctactaaaaccacccca
tattcgggagatatcatccctaccaataatccggttaaatttgaggcggttgacctgtat
gtaccggaacagtgctggagagaaaacgaatttgaaaatgatctgatatttaaaaaagtt
gttacaaaggaaggagatggaaattttgcaagaagttacagcttaacaagtgataagagg
agaaataacagagactttaaaagtagatctttaatggaactccctggtgaacgttcattt
acattaccaagtcgaggtcgcagtaaacagcgcccctccctggatgatagtgcactcggc
cagtcacacacaagttcacgaagttcaagaagttctgtgacttcgcaagatggatactta
gaaaacatgtttagaaaagagtgtgaagtagatgacagaatgaatgatatatataatgac
aatattgaagaagaatctgagggggaatacgagcaaactcgaagacgttcagcacaagtt
ttggatgaatcgttagaaactgaaactgaatctgagatgtctgaatcagattcagataat
gatcaaatcactctaccaaaggtgaagttgaaaacaagtataagtgcaccattagaagga
agtgtaagggaaaacaacgaattacagaaaactgctgctgaagacacagacgaatctagg
gaaattcattctatagttagtcagtgtcacagtttagatagtgaaacgggtaatagatac
aaacgtgaaggtgaggtgtttgacgggacagtcagtcctagtgaatatacatctgaactt
gatcgtgtaatagccagagaacaaagtagaaataaatccaatacgttaaattcacaaggt
acaagtgacggacatacctcctcgcatacatcttctagtagtattagttatcaagggaaa
tcagctgcggagagggcatttgatcgaggttcaactgattctgtgtcggctagttccagg
aaaaagatatccccaaaagcagagtttagtttcacttcacaaacttctaatgaagatacg
agaccacaacgaaaaaaatcaagacagtatgttaaaggagggagacgatacacagttcag
ggtcttgaaggattatcaacgcaccggtcagcccccgatatccgagaccagcgtccagtg
ttaaacagagaagattctgtacctggggatttaatggcggtctataaaaatatgaataga
gaggagttgataaagttggtagttacgcataaagcgcagttgatacggaaagatcagtat
ataaaggaattggagaattacattgacaaccttctagtcagagttatggaaagctctcca
cgcatattgcagaacttgtga
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