Mercenaria mercenaria (northern quahog): 123536073
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Entry
123536073 CDS
T07835
Name
(RefSeq) poly(A) polymerase beta-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123536073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123536073
Enzymes [BR:
mmer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
123536073
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
123536073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4799
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
123536073
NCBI-ProteinID:
XP_045174811
LinkDB
All DBs
Position
1:complement(63104146..63149458)
Genome browser
AA seq
742 aa
AA seq
DB search
MALDSASQKYPGITSPISLEGPKPVDLKLSAKLEETMRPFGVFESEEELAHRMEVLNKVN
MLVKEWIRDVSRRKNNIPENRIDSFGGKVCTFGSYRLGVHKKGADIDTLCVAPRHVDRSD
FFSSFVELLKEQPEVKDLRAVEEAYVPVIKMTFDGIELDMLFSRLALPTIPEDIDLRDEA
LLKNLDQKCVRSLNGCRVTDEILHLVPNVESFRMTLRAIKLWAKKRGIYSNSLGFLGGVS
WAMLVARVCQLYPNADPSTLVQKFFMVYSKWPWPQPVLLKQLQAENRLNLTVWDPRINPS
DRFHLMPIITPAYPCQNSTFNVTNSTRQIMMDEFKEGLDITNEIFKHNEDGDWSKLFEPS
NFFQKYKHYIVLTCSAEEENNYLEWQGYLESKIRLLVGNLERNPFIRLAHVTPESFGPLD
ESDAGYMCKWFIGLAFNKVENANVDLTFDIQSFTHIVYKQAIHIKLYKEDMSVEIKHVRR
KQLDQFVPAEVLTRGCKKIMKRPEVRQSTGNLQKLAASPESVKTLSHSKSDTELLHTSDR
DTNSEQNSDKKDDNTEEKCTKSDMNGETEEKDQRKTPDLIVIEDEPEQKTPVQNNVALKK
PMQETVGSPMHVDSGMNSPVYKKREGSPPGFNTPVKRSKSTEDSQGSCSPMHTDPGLHSP
TLKKDISISKTVDEFKEPMQIEEKSIPVILSGGKAIEKVARGRRLPSKEVPDLLSPLAQN
SATTPPTAATVPKHTIKMVLKR
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgacagtgcttcacagaagtacccaggtattacttcaccaataagcctggaa
ggtccaaaacctgttgatctgaaactctcagcaaaacttgaggaaacaatgaggcctttt
ggggtatttgagagcgaagaggaattagcgcatagaatggaagttctcaataaagtaaac
atgcttgtgaaagaatggatcagagatgtcagtcggagaaagaacaatattccagaaaat
agaattgattcatttggtggcaaggtgtgtacatttggatcatacagactaggagtacat
aaaaaaggtgctgatatagatacattgtgtgtagcacccagacatgtggatagatcagat
ttcttctcatcttttgtggaacttcttaaagaacagccagaggtgaaagatctcagggct
gttgaagaagcatatgtaccagtaataaagatgacatttgacggaatagagcttgatatg
ttgttttcacggctagcactgccaactataccagaggatattgatctcagagatgaagcc
ttgttaaaaaacttggaccaaaaatgtgtgagaagtcttaatggatgcagagtgacagac
gaaattctgcatcttgtaccaaatgttgaaagctttagaatgacccttcgtgcaatcaaa
ttgtgggccaaaaagcgtggaatatattccaattcactgggatttcttggaggtgtatct
tgggcaatgttggtagcacgtgtatgtcaactataccctaatgctgacccctctacctta
gtacaaaaattctttatggtttattcaaaatggccttggccacaaccagtcttgttaaaa
cagttacaggcagaaaacagactcaatttaacagtttgggatccaaggattaatccctca
gatcgtttccatctcatgccaataatcacaccagcatatccatgtcagaactccacattt
aacgtcacaaattccaccagacagatcatgatggatgaattcaaagaaggtttagacatt
accaatgaaatatttaaacacaatgaggacggagactggagtaaattgtttgaaccgtca
aatttctttcaaaaatacaaacattacatagtattaacatgttcagctgaagaggaaaac
aattacttagaatggcaggggtatctggaatcaaagattcgactgttagttggaaatttg
gagagaaatcctttcatacggttagctcatgtaacaccagaatcatttggtccactagat
gaaagtgatgcagggtatatgtgtaaatggtttattggtttggccttcaataaagtggaa
aatgcaaatgttgatctcacatttgatattcaaagtttcacacatattgtatataaacag
gcaattcatataaagttgtataaagaagatatgagtgtagaaatcaaacatgtcagaaga
aaacaactggaccaatttgtacctgcagaggttctcacaaggggttgtaaaaagattatg
aaacggccggaggtccggcagagtactgggaacttgcagaaattggcagcatctccagaa
tcagttaaaacattgtctcatagtaagtcagatactgagttgctacataccagtgatagg
gacacaaacagtgagcagaacagtgacaagaaagatgataacacagaggagaaatgcaca
aagtcagatatgaatggtgaaactgaagaaaaggaccaaaggaaaactccagatctgata
gtgatagaggatgagccagagcagaaaactcctgtacaaaacaatgttgccctcaaaaaa
cctatgcaggaaactgtgggatcaccgatgcatgtagacagtggtatgaacagtcctgta
tacaagaagagagagggttcaccacctgggtttaacaccccagtgaaacgctcaaaatct
actgaagattctcagggaagctgttcaccgatgcatacagacccaggtctacacagtcct
acattgaagaaagacatatccatctctaaaactgtagatgaatttaaagaaccaatgcaa
atagaggaaaagtccataccagttattttatcagggggtaaagccatagaaaaagtggca
agaggacgtcggctacctagcaaggaagtaccagatctgttaagtccactggcccagaat
tctgcaaccacaccacctacagcagcgacagtacccaaacacacaattaaaatggtactt
aagagatga
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