Mercenaria mercenaria (northern quahog): 123536104
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Entry
123536104 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123536104
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123536104
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123536104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
123536104
NCBI-ProteinID:
XP_045174861
LinkDB
All DBs
Position
17:54019885..54059224
Genome browser
AA seq
1634 aa
AA seq
DB search
MGVTQLWQILAPVEQHLTLSSLAGQTLAVDLSIWVCENQCVKQMQGVVSKPYLRNLFFRI
SHLTQLGVKLVFVIEGSAPELKWDTMIKRQQSRFPGRQGKQPPQRPAGKQTRRNFNSWLK
ECCELLEILGIPYIQSKGEAEALCALLNASGLVDGCLTNDGDAFLYGATTVYRNFTMNSK
DPHVDMYRVNDIQTKLGIDRGGLIALGLLIGCDFVPKGVPGIGIANAVRLLQSLQGQDVL
IRLQSWSTMSERDCVDQAEILARRKAIQLPDFPQIKVIDEFLVAKDRCPSRLPEWKRPVP
AKLQEFALIKLEWPVEYTMEKVLPLITLWDMQDLSHSKNPSVHQHLKPHRIVKTRIRQGE
PCYEVEWIKPVTDTVYDGSFYITIEAQDLFSKCYPDVVKAFITQSAETKKKPKAKKKKKK
AEAPPIEPPSLDNLSFQFEKVNLGKVASQLQESVKDLHPSFSEYDETALTTKAKQPRHLT
LSPNSKKSGTKGENSEIRKPVAIPISQPEETVTKSGRGTEESSVVPLSQRVKLRLQNKHH
GNNKENQDKKDKMSKMVLNDQKFNVLKSPGADLSSMGSLLEDIQNLSLKEAENFRHKSKE
KTTSPSLSKLRCESSRHVVSMKQTTSMNVSTRKMSTMKEIQKMSSPLTEVICSPMTYMKH
QGALGDSFEIQRSPYYIENPFAAAKLKTEKTIDISSPGFFSRPDPKTAPEEIDKRCAAER
LIEKIESGISQVGTDDRVSTNHVMSSQKKTVPKSVPGGEELTVDSLMSILNNSSSGKLSG
TPQQLGKEKISSQANQTTANQSVLGLETSLGQFGDFQIQHSLLNSLCSSLVQALTPKGVS
MTRDEYDKLLNTLNEIDSDEDDNLDENSMNENNVLQDEVVCNIDFSELEKASTSFKNLNQ
KLLLRPIQIDDEDVMSKLSKSARKKLRRRERKREQELENLAQLQNMSHCKGKTKSSGSGQ
QTHRDSVKTNCSEKIVNDGFKKTDKRKKVNENSVHNLLHTTKSAGKANSKMRCSTKTNVS
KTENSPCANTVESKLSRPEEMKENNDQSEVIVESDPKLKKKRKKKKVKKASSVIDISADN
SILEVGSCAEYLKKALENNQKKLSENRITKASPFMDVSADDTLLELEGLSCKVTGEELDS
DLETKLKKKKRISKEKMCKEYGANMAKAIQIEPVLSINNMVTDELGDVKSENSHVCECGE
KGKAESEENKVTVKAIEVDEVVEIKLEEDRNEEFLVEKICSDALNMQSTEESALSNAKTR
EILNEDARVIKLQENNSAANFPVRELEHSEKARESSNCDSDMKKVSETKHESGKTVHGLV
DTAFDIDKADTSDEGLKNEKDNAEINCVCNTIENDSSICLDNEKNLVPEVVCSAKDKDEE
SENGEVAKVLETLNTYHMEPSDRDVEVLDKNTSHVFEKDVLDKISLDTLVLNVEDDASDT
VRSGEDDANGIVKSDEDCEKIFSGMVDNTESRREKVENGKTVCEFSGQSLKIGVENISKK
MLDTVRSNASDNDSYMLDVTNGVDTCTDNIVEENGEYITKFQSIVNGKVRVDNLDSSEEN
MEKCSLNGNGYLENSNENGTEICKSEKTNVDEAWRDNVMKPEVFQSPACLADRLKLKLRK
TSTKNVLDAFTNGK
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgacacagttatggcagatactggccccggtggagcagcacctgaccctgtct
tcacttgcaggtcaaacactagcagttgacctgtccatctgggtctgtgaaaatcaatgt
gttaaacagatgcaaggagttgtatcaaaaccttatctaaggaatctgtttttccgcatt
tcacatctaacccagcttggtgtaaagctggtgtttgtgatagaggggtcagctcctgag
ttaaaatgggatacaatgataaaaaggcagcaatcaaggtttccaggtcgacaggggaaa
caacccccacagagacctgctggaaaacagacaagaagaaatttcaactcctggttaaaa
gagtgttgcgagttattggagattctaggcataccgtacatacaaagtaaaggggaggca
gaggcgttgtgtgctctccttaatgcatctgggttggtagatggatgcctcaccaatgac
ggtgatgcttttctttatggggccacaactgtgtacagaaacttcacaatgaattcgaag
gacccacatgtagatatgtatcgagtgaatgatatacagacaaagctaggtatagatagg
ggcggtcttattgctctggggttgctgattggttgtgactttgtaccgaaaggtgtacca
gggataggaatagcaaatgctgtaaggctgttacagtcactgcagggccaggatgttctt
ataaggctacagtcttggagtacaatgtctgagagagattgtgtggaccaggcagaaatt
ctagctagaagaaaggctatacagcttccagattttccacaaataaaggtgattgatgaa
tttctggttgccaaggatcgatgcccatcaagattaccagaatggaagagacctgtgcct
gcaaaactacaggagtttgccctgatcaagctagaatggcctgtagagtatactatggag
aaggtgctaccactgatcacattatgggacatgcaggatctcagccattctaaaaatcca
tcagtacatcaacatctgaaacctcacaggattgtgaagacaagaatcaggcaaggggaa
ccatgctatgaagtagaatggataaaaccagtgacagacacagtgtatgacgggtccttt
tacattactatagaagcacaagatctgttttcaaagtgttaccctgacgttgttaaagct
ttcattacacagtctgcagaaacaaagaaaaagccgaaagcaaagaaaaagaagaagaag
gcagaagcaccacccattgagccgccatcattggataacctgtcattccagtttgaaaaa
gtaaatcttggcaaagttgcatcccagctacaggaatctgtgaaagatctacatccgtct
ttctcggaatatgacgagacagccttaactactaaagccaagcaaccaaggcatttaaca
cttagtccaaattccaaaaaatctggtaccaaaggtgaaaattctgagattaggaaacca
gttgccattcccatctcacaaccagaagaaacggttacaaagtcagggagaggcactgaa
gagagttctgttgtgccgcttagtcagcgggtaaagctgagactgcaaaataaacatcat
ggtaataacaaagaaaaccaggataaaaaagacaaaatgagtaaaatggttctaaatgac
cagaaattcaatgttttaaaaagtcctggtgctgacttaagcagtatgggttctttactt
gaggatattcaaaatctttcactaaaagaagcagaaaacttcagacacaagagtaaagaa
aaaacaacctcgccatctctctcaaagttaaggtgtgaaagttcacgacatgtggtttca
atgaaacagactacttctatgaatgtatcgacaaggaagatgagtactatgaaagaaatt
cagaaaatgtcaagtccattgactgaagtgatctgcagtccaatgacgtatatgaaacat
cagggagctttaggtgatagttttgaaattcagagaagcccatactacatagagaaccct
tttgctgctgccaagttaaagactgaaaaaactatagacatttctagtcctgggtttttc
tcaagacccgatccaaaaactgcacctgaagaaatagataaaagatgtgctgcagaaaga
ctaatagaaaaaatagaaagtggtataagtcaggttggaactgatgatagagtttctacc
aatcatgtcatgtcgtctcagaagaaaactgtcccaaaaagtgttcctggtggtgaagaa
cttactgtagattccttaatgtcaattttgaataattctagttcaggaaaattgtcaggc
actcctcaacagttaggtaaggagaaaatttcctcacaggccaaccaaacaacagccaac
caatctgttttggggctggaaaccagtcttgggcagtttggtgattttcagatccagcat
tcattgctgaatagtttgtgttccagtcttgttcaagctttgacacctaaaggagtttca
atgacaagagatgaatatgacaaacttttgaacactctgaacgagatagattcagatgag
gatgacaatttagatgaaaatagtatgaatgaaaataatgtgctccaagatgaagttgtg
tgtaatatagatttttctgaattggaaaaagcatctacaagttttaagaacttgaatcaa
aagctgttgttgagacctattcagattgatgatgaggatgtgatgtccaagttatcaaaa
tcagctagaaagaaattaaggagaagagaaaggaagagagagcaagaattggaaaatttg
gcgcagttgcaaaacatgtctcattgcaaaggaaagacaaaaagttcaggatcaggacag
caaacacatagggactctgtgaaaactaactgttcagagaaaatagtaaatgatggattt
aagaagacagataagagaaaaaaagtaaatgaaaatagtgttcacaacttactacatacc
acaaagtctgcaggaaaagcaaactcaaaaatgaggtgttctactaaaacaaatgtcagt
aaaacagagaattcaccttgtgcaaatacagttgaaagcaaactgtcaagacctgaagaa
atgaaagaaaacaacgatcaatctgaagttatagttgaaagtgacccaaaattaaaaaag
aaaagaaagaagaaaaaggtcaagaaagcatcatctgtgatagatatttctgcagacaat
agtattttagaggttggatcttgtgcagaatatttgaagaaagctttagagaataaccaa
aaaaagttgtcagaaaacagaataacaaaagcctctccattcatggatgtctctgcagat
gatactctgttagaattagaaggactttcatgtaaagttacaggagaggaattagattct
gatttagaaaccaaacttaaaaagaaaaaaaggatttcaaaagagaaaatgtgtaaggaa
tatggagcaaatatggccaaagcaatacagatagagccagttctttccattaacaatatg
gtgacagatgaattgggggatgttaaatctgaaaattctcatgtttgtgaatgtggagaa
aagggtaaagcagaaagtgaggaaaataaagttacagttaaagccattgaagttgatgaa
gttgtagaaattaagttggaggaagacagaaatgaagagtttcttgtggaaaaaatatgc
agtgatgctttgaatatgcagagtactgaggagtcagctctctctaatgcaaaaacgaga
gagattctcaatgaagatgcaagggtaattaaacttcaggaaaacaatagcgcagctaac
ttcccagtcagggaactggaacattctgaaaaagcaagagaatcatctaattgtgattca
gatatgaaaaaagtatctgaaactaaacatgaaagtggaaaaactgttcatggtcttgtt
gataccgcatttgatatagataaagcagacacatcagatgaaggtttaaagaatgaaaag
gacaacgctgaaatcaattgtgtttgtaatacaattgagaatgatagcagtatatgtcta
gataatgaaaagaatttagtgcctgaagttgtttgttcggctaaagacaaagatgaagaa
agtgaaaatggagaagttgcaaaagttcttgaaacattgaatacatatcatatggagcca
agtgatagagatgttgaagtgcttgataaaaatacctcccatgtgtttgaaaaagatgta
ctggataagattagtcttgatacattggtgctaaatgttgaagatgatgcaagtgataca
gttagaagtggtgaagatgatgcaaatggtattgtcaaaagtgatgaagattgtgaaaaa
attttcagtggtatggttgataatactgaaagtagaagagaaaaagtagaaaatggtaag
actgtatgtgagtttagtggacagagcttgaaaattggcgttgaaaatatttcaaaaaaa
atgttagatacagttagatcgaatgcttcagataatgattcttatatgctggatgtaaca
aatggtgtggatacttgtacagacaacatagtagaagaaaatggtgaatacattacgaaa
tttcaaagtatagtgaatggtaaagtgagggttgataatttagattcatctgaagagaat
atggaaaaatgtagtttaaatggaaatggttatcttgaaaattctaatgaaaatggtaca
gaaatttgtaagagtgaaaagactaatgttgatgaagcttggagagataatgttatgaag
ccagaagtgtttcagagtccagcatgtcttgccgacaggttaaaacttaaacttagaaaa
acttcgaccaagaatgtgctagatgcttttaccaatggaaaatga
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