Mercenaria mercenaria (northern quahog): 123536224
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Entry
123536224 CDS
T07835
Name
(RefSeq) low-density lipoprotein receptor-related protein 4-like
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123536224
Membrane trafficking [BR:
mmer04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
123536224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
Vgb_lyase
cEGF
EGF_LRP2
SGL
EGF_CA
EGF
Stevor
Psg1
Motif
Other DBs
NCBI-GeneID:
123536224
NCBI-ProteinID:
XP_045175137
LinkDB
All DBs
Position
17:complement(34269391..34366780)
Genome browser
AA seq
1844 aa
AA seq
DB search
MTGYILSFCWLALISVCFGDDSECSCPAFNKFSCGNCVCIPQALVCDGQPDCENGKDEQG
CGVQRITSHCPADHFTCWNQQCLRLDWVCDGDNDCGDDSDELMCPPKNCTEEEFQCNNGN
CVLSKWRCDGDDDCRDGSDEHCDHQCSPSQFKCSGDGTCIHKSWVCDKEVDCQDASDEAS
CGLEDLYCGPHEFTCVQAHRCIPKQKRCDRNNDCNDWEDEIGCDFQQAENTCKEGEFPCD
QGLCINADWRCDGQRDCEDSSDEKNCSQTGCTADQFRCKIGYCIDKRLQCNGQLDCSDNS
DELNCGTASCGLGQFHCTNGECIGSQKVCDTVRNCADGSDERNCHWAAKCDNNNGGCGHL
CQQTTLGAKCSCRRGYMLLPNGRDCADIDECGLDNVCSQLCVNTPGSFKCDCTHGYILKP
DGRGCKAQVNTGEKAYLIFANRVDIRRVMPDMSEYDSILQGLENAIALDFHHEKGYVYWS
DVTLDKIKRAYLNGTGIKEVVAYGLESPGGVAVDWIHNILFWTDSGTSRIEVSNLDGDHR
KVLLWENLEKPRAIAVHPGEGYIFWTDWGSTPKIERSSMDGLDRVVIANTSLFWPNGLTL
DYAAEKLYWADAKHHVIECSNYDGSHRRTVINQGLPHPFALTLFEDELYWTDWHTKSINK
ANKFTGNDVEMVRNRLHFPMDIHIFHRERQPEAENRCPGNQKGCSHLCLPSTVGYKCACP
TGLDLKEDRKTCVRNIESFLLFTTRSDVRRITLGTPDQSDVVIPLSNTVSTMSVDFDNTT
DTIFWTDSGTNAISAAKWDGTQERVVVSSSVGSPAGLAVDWATRKLYWTDSEMGRIEVSN
LDGSMRGVLIWSGLQKPRDIVVDPISGYMFWTDWDKPSRIERAGMDGRDQKVLIHTNLTH
PNGLSIDYKGSPRLYWIDAGTYSLESCTLDGSDRKVVFTMSDPRPFGFTIYEDSMYWADW
LTKKIMNSDRHGNSQVTLQSNMGNVMDLTVFHRNRPEISTVCQEENGHCSHLCLPAPLPR
GHTCVCPTGILLHPDGRTCNTEMRNFLIFAQRTDIRKISLDVDYFADVPLPIHSLKNAIA
ISVDRVEGKVYWTDTVLDKIKRANLDGSNIENVINHGLDTPDGMVVDETGRKIYWTDTGL
NRIEVSSLDGSMRRVLIWEGLDKPRAISLFYEERYLFWTDWGKEPKIERSELDGGNRKVI
VSESIIWPNGLTVDRQTSRILWADARTEQIESVDLNGGGRQVLVYKVAHPYNLAISGDLV
YWTDWQKTAVFSAKKDGSSPNKQQQVLPKLAGIMDIHAVHMDEKVNLKMDKCRKKNGGCS
HLCLPNRRGVTCLCPSGLQLRPDKVSCESMPEEYILFASRGSIRRIALDLPDMTDVYLPL
PDLQNIIAIDYDYSEKKLYYTDVQLDVIRRANLNGTEIQTLISSRLKTTDGLAVDWIGKN
LYWTDTGTDVIEVAKLSGQYRRTLIKDNLDQPRAVAVYPQKGYLYWTDWGYRPRIERAYM
DGTHRKIIINSNLGFPNGLSIDYVAERLYWVDAKLDKIETSTLEGNNRVTLIQNVPHPFG
LTVFGDYVYWTDWQSQQIERADKRTGKHRETIKQLFVGLMDIEVVTPHRQTGINDCAFSN
GGCTHLCLARPDGHSCLCPDVKTINKTCIAVPKDRAVFTDVTVNGENTGLGCSQSDEKAG
LCTSPTQEEEPSLKGAYIALAIVIVLVLSGVLLIIFIWKRQRRRQHYQEDFSTLTFTNPN
YQRTSTETINSDRPPREWRIFRFNKRADRVSVVSSNCTSEEKLNTSETDALYPASSDTDG
ASCFPDTPLSKNIFKPRNSGQNNSNKPKRVPYKPVEKHTDGKIS
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgactggatatattttaagcttttgttggcttgctttaattagtgtttgttttggagat
gacagtgaatgttcttgtcctgcctttaataagttctcatgcggtaactgtgtgtgcatc
ccacaggccttggtgtgcgacggacagccagactgtgagaatggaaaggatgagcagggc
tgtggagttcagcgtataaccagccactgcccggcagaccatttcacttgttggaatcaa
caatgtctacgactagactgggtctgtgatggcgataatgactgtggtgatgattctgat
gaactcatgtgtccgccaaagaactgcacagaagaagaatttcagtgtaacaacggtaac
tgtgttctctcaaaatggcggtgtgatggcgatgatgattgtcgggacggctcagatgaa
cactgtgatcaccaatgcagcccgagtcagttcaagtgttctggagatggtacatgtata
cataaatcttgggtgtgtgataaggaagttgactgtcaggatgcttcagatgaggcctcc
tgtggattagaagatctttactgtggtccacacgagttcacgtgcgtgcaagcccatcgt
tgtataccgaaacagaaacgctgtgatcgtaacaacgactgtaatgactgggaagatgaa
attggttgtgatttccagcaggctgagaacacatgtaaggaaggggaattcccatgtgac
caaggtctttgtattaatgctgactggagatgtgacggccagagagattgcgaagactcc
tctgacgagaaaaactgctcccagactggttgtacggctgaccagtttagatgtaaaata
ggatactgtatagataaacgcctgcaatgtaatggacaacttgactgcagtgataattca
gatgagttgaactgtgggacagcatcatgtggactgggtcagtttcattgtactaatggg
gaatgtatcggtagccagaaagtgtgtgacacagtcagaaattgtgcagatggatcagat
gaaagaaattgtcactgggcagcgaaatgtgacaacaacaatggaggttgtgggcatctg
tgtcagcagactacacttggtgccaaatgttcttgtcgccgcggctacatgttgcttccc
aatggtcgtgactgtgctgatattgacgaatgtgggttagataacgtgtgtagtcaactg
tgtgttaacacaccagggtcattcaagtgtgactgtacacatggatacatcctcaaacca
gatggcaggggctgtaaggcacaagtgaacactggggagaaagcctacctgatatttgca
aatcgtgtcgatatccggcgtgtgatgccagacatgtcggaatatgacagtatcctacaa
ggactggagaatgcaatcgcacttgactttcaccatgagaaaggttatgtatactggtca
gatgtgacactggataaaatcaagagggcctaccttaatgggacaggcatcaaggaggtg
gtggcctatgggcttgagagtccaggtggagtagctgttgactggatccataacattctg
ttctggactgactctggtacatctcgtattgaggtttcaaatcttgatggagatcaccgt
aaagttttactgtgggaaaatctggaaaaacctcgtgccatagctgtgcaccctggagaa
ggatatatattctggacagactggggaagtacaccaaagatagagcgaagcagtatggat
ggtctagatagagtggttattgctaacacctcgttgttctggcccaacggtttgacttta
gattacgctgctgagaaattgtactgggccgatgctaaacaccatgtaatagagtgttca
aactatgatggctcacatcgcaggacagtcattaaccaagggttaccccacccatttgca
ctgacactgtttgaggatgagttatactggactgactggcatacaaagtcaataaacaag
gcaaacaagtttacaggcaatgatgtagagatggtcagaaatagattacactttcccatg
gatatacatatcttccacagagagagacaaccagaagctgaaaatcgttgccctggtaac
cagaagggatgtagccatttatgtttgccaagtactgtgggatataaatgtgcttgtcct
acaggacttgatctgaaagaagataggaaaacatgtgttagaaatattgagtccttcctg
ctttttacaaccagatcagatgtaagaaggataactcttggtacacctgaccaatcagat
gtagttattccccttagtaacacagtcagtacaatgtccgttgactttgataatacaaca
gatactatattctggacagacagcggtacaaatgctatcagtgcagcaaaatgggacggc
acgcaagagagggtggttgtgagttcgagtgtaggcagtccagctggtctggcagtagat
tgggccaccaggaagctgtactggacggactccgagatgggtagaattgaggtgtcaaac
cttgatggttctatgagaggtgtactgatctggtcaggattacagaagcctagagacata
gtggtggatccaatttcagggtacatgttttggactgactgggacaaaccatctaggatt
gaaagagcaggaatggatggtagagatcagaaggttctcatccatactaatctcacacat
cctaacggcctgtctatagactacaaaggatctcctagactatattggatagatgcaggc
acctactccctggaatcctgtacactggatggttctgatagaaaggtggtgttcacaatg
agcgacccacgaccttttggatttactatttatgaagacagtatgtactgggctgattgg
ttgacaaagaagatcatgaactcagatcgccatggcaacagtcaggtgaccttgcaaagc
aacatgggtaatgtgatggacttgacagtgttccatagaaacagaccagagatttcaaca
gtatgccaagaagaaaatggtcactgcagtcacctttgtctgcctgctccccttccccga
ggtcatacatgtgtttgtcctacagggatattgctgcatccagatggcaggacttgcaat
acagaaatgcgtaactttctgatatttgcccagaggactgatatacggaaaatctcactc
gacgtggattactttgcagatgttcctctacctatccactcactgaagaatgccatagct
atcagtgtggatagagttgaagggaaggtatattggacagacactgttctagacaagatt
aagcgtgcaaacctggatggctctaacatagagaacgtgatcaatcatggtctggataca
ccagatggtatggttgttgatgagactggaaggaaaatctactggactgacacaggttta
aatcgtatagaagtttccagtctagatggttcaatgaggcgagtattgatctgggaggga
ctggataagccaagggcaatatctctcttctatgaggaaaggtatttgttttggactgac
tggggtaaagagcctaagattgaacgctctgagttagatggaggcaatcgtaaagtgatt
gtctcagaaagtattatctggcctaatggactgactgtggatagacaaacatccaggatc
ttatgggcagatgccagaactgagcaaatagagtcagtagatctgaatggtggagggcgg
caggtgttggtgtacaaggtagcacacccatacaacctggctatatcgggtgatctggta
tactggaccgactggcagaagaccgctgtattcagtgctaaaaaggatggatcttctccc
aataaacaacaacaggtgctccctaaactggccggaattatggatatacatgctgtacat
atggatgaaaaagtcaatttgaagatggataaatgtcggaaaaagaatggaggatgcagc
catttgtgtttgccgaacagaagaggtgttacatgtttgtgtccgtcaggacttcagtta
cgaccagacaaagtcagctgtgaaagcatgccagaggagtatattttatttgcaagccgg
ggcagtatccgcagaatagccttggatctgccagacatgacagatgtgtatctcccgcta
cctgaccttcaaaatattatagctattgactatgactactcggagaagaaattatattac
acagatgtacagctggatgtgatcaggcgagcaaacctgaatggtacagagatacagaca
ttgatcagttcacgattgaaaactaccgatggactggcagtggattggatcgggaaaaac
ttgtactggacggacacaggaacagatgtgatcgaggtggctaaactgtccggacagtac
agacgaacactgatcaaggacaatctggatcaaccaagggccgtagctgtatatccacag
aaagggtacttatactggaccgactggggatacagacctcgtatagaacgagcttacatg
gatggtacacacaggaaaattatcatcaactctaacctaggttttcctaatggtctgtct
atagactatgtagccgaacgtctttattgggtggatgctaaacttgataaaatagaaaca
tcaacattggaagggaataacagagtgactttgatacagaatgtaccccacccatttggt
ctaacagtgtttggagattatgtgtactggacagactggcagtcccaacagatagagaga
gctgataaacgcacaggtaaacatagagaaaccattaaacaactgtttgttggactgatg
gacattgaagtggtcactcctcatagacaaacaggaatcaatgactgtgcgttcagtaat
ggtggatgtacacacctgtgtttagcaagaccagatggtcattcctgtttgtgtcctgat
gtcaagaccatcaacaaaacatgtattgcagtgccaaaggatagagcagtatttactgat
gttactgtgaatggagaaaatactggcttagggtgtagccagtctgacgagaaggcgggt
ctgtgtacaagccctacccaggaggaggagccaagcctgaaaggggcatacattgcttta
gccattgttattgttctggtactttcaggagtgttgctcataatatttatttggaaaaga
caacgaagacggcagcattaccaagaggatttctctaccctcactttcacaaaccctaac
taccaaagaacaagtacagagactataaactctgacagacctccgagagagtggcgaata
tttcgatttaataaaagagcggacagggtatctgttgtcagctctaattgtacgagcgag
gagaagctgaacacgtcagagactgacgctttgtatcccgctagttccgatacagatggc
gcttcttgtttcccagatactcctctttcgaaaaacatatttaaaccacgaaattcagga
caaaataattccaataagccaaaaagagtcccttataaaccagtggaaaaacatactgat
gggaaaatttcatga
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integrated database retrieval system
