Mercenaria mercenaria (northern quahog): 123536238
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Entry
123536238 CDS
T07835
Name
(RefSeq) paired box protein Pax-6-like isoform X2
KO
K08031
paired box protein 6
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123536238
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
123536238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
Homeobox_KN
HTH_Tnp_IS1
HTH_SB
DUF6115
B-barrel_PelB_C
HTH_28
Motif
Other DBs
NCBI-GeneID:
123536238
NCBI-ProteinID:
XP_045175164
LinkDB
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Position
17:23986300..24042006
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AA seq
474 aa
AA seq
DB search
MTMSSLEDKQLSSTKEEDSSSGENGGSNSLSKKARSKRGHSGINQLGGMFVNGRPLPDST
RQRIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATGDVCR
HVAQYKRECPSIFAWEIRDRLLADGVCNQENIPSVSSINRVLRNLATENQKVIGQGSMYD
KLGLLNGQAWARPNPWYPNMGMHSIGTSSYHQPPTSHLDTEKKHNDGNSSSDSNHSDGAK
GSENDEQMRMRLKRKLQRNRTSFTASQIEALEKEFERTHYPDVFARERLAQKIDLPEARI
QVWFSNRRAKWRREEKLRNQRRDPGNGSSRIHPLNTGFPNSMYPSLQTISQMGSPDQYSA
MPSVQNYSLNNNMPSNPSCLQSSSSPYSCMIPDYSGRSYDPLSLSAYSRSSCSAVAAASS
IPSHVTHNTHNGASPTGLISPGVSVPVQIPGGGHQDMGVHHMTSMTSQYWPRIQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgtcatcactggaagataaacaattatcctcaacaaaggaggaggattcatct
agcggcgagaacggaggatcaaacagtctaagcaagaaagcaagatccaaacgaggtcac
agcggaatcaatcaattaggaggaatgtttgtaaacggacgccctctaccggactcaaca
agacaaagaatagtagagttagcacacagcggtgccagaccatgtgacatatctagaatt
ttacaagtatccaatggatgtgttagtaaaattcttggacgctattatgaaaccggttct
ataagaccacgtgcaataggtggcagtaaaccacgtgttgctaccggagacgtttgtaga
cacgtggcgcaatacaaaagggagtgtccctctatatttgcatgggaaatacgagatcga
ctgctcgcggatggtgtctgtaatcaagaaaatattccaagtgtgtcttctataaataga
gtattacgtaatctcgctacggaaaaccaaaaggtaataggtcaaggcagcatgtacgac
aaactaggtcttctcaatggtcaagcatgggcaaggcccaatccgtggtaccctaacatg
ggcatgcacagtattgggacaagttcttatcatcaaccaccaacaagtcatcttgataca
gaaaagaaacataatgacggaaactccagttccgacagtaatcatagtgatggtgccaag
gggtcggaaaatgatgaacaaatgcgcatgcgcctgaagagaaaattacagagaaacaga
acatcgtttacagcatcgcaaatagaagctctagaaaaagaatttgagcgaacgcattat
cctgacgtgtttgcgagagaacggctagcgcagaaaatagaccttccagaagctagaata
caagtttggttttcaaatcgtcgagcaaaatggcgtcgggaggagaaactacgaaaccaa
cggagagatcctggaaatggatcatcacgtattcatccgctaaacaccggttttccaaat
agcatgtatccatctttacagacaatttcacaaatgggttcaccagatcaatatagtgca
atgccaagtgtgcagaactactccctgaacaacaatatgccatcgaatccgtcatgtctt
cagtcctctagttctccatattcatgtatgattccagattactcaggaagaagttatgat
cccctttctctcagtgcctactcgagatcttcgtgcagcgctgtagcagcggccagtagt
attccaagtcatgtgacccataatacgcataatggtgcgtctcctactggtttgatctca
cctggtgtatcagttccggttcaaatacctggtggaggtcaccaagacatgggcgtacat
cacatgacatcaatgacgtcacaatattggccgcgtatacaatga
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