Mercenaria mercenaria (northern quahog): 123536451
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Entry
123536451 CDS
T07835
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1-like isoform X1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mmer04990
]
123536451
Domain-containing proteins not elsewhere classified [BR:
mmer04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
123536451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
AAA_16
Beta-prop_RIG_2nd
ANAPC4_WD40
NACHT
Beta-prop_TEP1_C
Beta-prop_HPS5
DUF4062
WDR90_beta-prop_4th
NPHP3_N
ATPase_2
Beta-prop_WDR75_1st
eIF2A
APAF1_C
Beta-prop_WDR35_TULP_N
nSTAND1
Beta-prop_WDR19_1st
AAA
AAA_22
Beta-prop_NWD2_C
NB-ARC
KAP_NTPase
Bac_DnaA
Y_phosphatase
VMAP-M5
AAA_30
NPHP3
Motif
Other DBs
NCBI-GeneID:
123536451
NCBI-ProteinID:
XP_045175579
LinkDB
All DBs
Position
17:complement(10952208..10966916)
Genome browser
AA seq
1613 aa
AA seq
DB search
MGSGSSKPKKKETGVKNEIRPARVDEPSDKQAPQQEEMFKAYKAEQNVPETKADDKSDAA
RADELPWKQALDKVAGMELWGGKNREQRSPWKEYLQKADDILKKPRRAIPKEVVGQILEG
DMTVVDISSVPTAQPKVVVFVSSTFTDTKAERNHLMKDVYPYLRGLCRRLGVDFGTVDMR
WGVTQEATLDHSTVEMCVNEIHRCVKDSVGPAFLCLMGHKYGYRPLPAQIEQSEFETLLN
HLQQTGHDTSLINNYYFLDNNAVPSEFVLKPRTEDNETWWDDVEGIQKQFREASVACFGE
QNKKCDKYHISVTETEIHTGVFNNPTAQTQACFIRRDLAKFSEDFHKDRKILDLVGPNID
EYARDKLAELRKKKIPSKVPPVIVKDMIYEEAVPKQVAEKIKDLCEHVCKTMADGILENY
ENRLHVEEDRVFQEALQHRSHASEKASLFVGRENEIRHIMDYMRSSSTKPLVVHGQSGCG
KTALMAVAARKAKDAFSHAVVVLRFLGTTGQTASARLLLLNVCAQITRVYNKNLSAIPTS
YKDLVKYFRTCLAFATSSKPAIVFLDSLDQLNNEDFGQNLAWLSLSEDLPPNVKFVVSSL
PTRSLDILKSHLNDAVFVEVRPLSLDEGPEILKKMLEAKHRRVTESQKSLIIDAFKKCPL
PLFLRLVVDIAERWKSFDTVDSSALADDMPGLITKLFDRLESRFGDMFVHHALGYITAAK
NGLSLAELEDILSCDDEVLDSIFQWWIPPIRRIPPLLWARVRNELGIYLAEKGTDGISAY
GWYHRQFWETAEKRYLQKPFNNDTDLFVGKAHTAIADYFEGKWDDGKPYTSKGETKIEDR
KIAKQSLVLGGNRSTGRQLNRRKLTELPYHLIKIEEWDRFRKLVIDLEYIEAKFEAGDGY
NCLSELIEATKLSGLDDIKRLTRFVGSNLGFLIREPTGVYQMALQQARGSNVRELLGRLS
KENLPLPLMENLHESDYDDPCEMTMHGHTETLRCCDYSPKGDLILSSADDCTMRIWDATT
GAEIVTITSLPGPIFPDKNEGMQLMLHPVNPSCFSRSGETIANGTEIGEVMLWDKSGVQL
HSKSTPNKAVVYIHFSPDNRQIATAFKNSVLSIWSADDLSHVKTVDFDWLELTCLDYSRD
GKKLAVMCLRGMKIVMIGLILLDTDGYNVTSKETGSCYNNLCSTFHPSGSQVMTGGDDSC
VSIWNGNNGTYQTKLKEHNAWIWTIKFTPDGKHMFTGSSDRSMKVWRQTGGSWSVIATVG
GHSHRVSMISLEENGNKLVTSSIDRSLKVWDTATLLRGAVPPVGGGHYLTCVISPNGSFL
AIAQGWMKQCGLLDAAQFDQSPETYTDAHKGFIKMAQFSSDSSRLFVLDHGHSGGYEAGS
EKYAAIEVRSLLSGSSSYINVQSPYSFTLTNTHVVVGTFYGELHLFDINSYSEILKWKSR
SGGAITRVAACNAGGKYMIAACFGTVCQVWEFNGSSVNLVGDMSDHDTDIYDVAFSPDGH
YLVNGVGSGKLYIWDTSNKNISLFRIATEHASYIKDIKFSTSGNYLVTSAGLSMRVWDVK
DGMSLLCTYYAPVNCASFFNDSVVIVGEATGNRKYLQFRTDYTKSEVTTQCKM
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgggtagttcgaaaccgaagaaaaaagaaactggagttaaaaatgaaattcgt
cccgcaagagtcgacgaaccgtctgataaacaagcaccacagcaggaagaaatgttcaaa
gcttataaagcagaacaaaacgtgcctgaaacaaaagcagacgacaagtcggacgctgca
cgtgcagatgaattgccttggaaacaagctttggataaagtggccggtatggagttatgg
ggcgggaaaaaccgggagcagagaagtccgtggaaggagtatttacaaaaagcagacgac
attttgaagaagccacgtagagctattcctaaggaagttgtgggtcagatcctggaaggc
gacatgacggttgtggatatatccagtgtgccaacagcacagccaaaggtcgttgtgttt
gtcagttcaactttcactgatactaaagcagagcgaaaccacctcatgaaagatgtgtat
ccgtacctaagaggtttgtgcagacgtttgggtgttgactttggtactgttgatatgagg
tggggcgttacccaggaagccacgcttgatcatagtacagttgaaatgtgtgtcaacgaa
atacacaggtgcgtcaaagacagcgttggtccggcatttctgtgtctgatgggtcacaag
tatggataccgacccttgccagcccagattgaacagtcggagtttgaaactcttctgaat
catctacaacagactggacacgatacgtccttgatcaataactactatttccttgacaac
aacgctgtgccctccgagtttgtactaaaaccaagaacggaggataatgaaacctggtgg
gatgatgttgaaggcatccagaaacagtttcgggaagcttcggtagcttgtttcggagaa
caaaacaagaaatgtgacaagtatcacatttccgtcactgaaacagaaatacatacgggc
gttttcaacaatccaaccgctcaaactcaagcgtgctttatacgcagagatctcgcgaaa
ttttctgaggattttcataaagatcgcaaaatccttgacttagttggtccaaatattgac
gaatatgctcgtgataaacttgcagagctcagaaaaaagaaaatcccaagcaaggtacct
ccggtaatagtcaaagatatgatatatgaagaagctgtacctaaacaggtagcggagaag
atcaaggatttgtgcgagcacgtttgcaaaacaatggcagacgggatactagaaaactat
gaaaatcggcttcatgttgaagaggacagagtttttcaagaggctttacagcatagaagt
catgccagtgagaaagctagtttatttgtcggccgtgagaatgaaattagacatataatg
gattatatgcggtcttcttcaactaagccgcttgtggttcatggacagtctggttgcggt
aaaactgcactaatggccgtcgctgcaagaaaggccaaagatgctttctcacacgctgta
gtagtacttcgctttctaggaaccacaggtcagacagcttcagccagacttcttctacta
aatgtctgcgctcagataacacgtgtttacaacaaaaacttgtcagctatacctacctcg
tacaaggaccttgtgaaatatttcagaacctgtctcgcatttgcaacttcaagcaaaccc
gctatagtattccttgactcgctagatcagttgaataatgaagactttggacagaacttg
gcatggctttcattgtcagaagatttacctccgaatgtgaagttcgttgtatcatctctg
cctacacggtctttggatatcctgaaatctcacctcaatgatgctgtttttgtagaagtg
cggccattatccttggatgaaggtccagaaatcttgaagaaaatgctagaagcgaaacac
agacgtgtgactgaatctcagaaatcattgattatagacgctttcaaaaaatgtccgctg
cctttgttcctccgcctggttgtagatattgcagagcgctggaagtcttttgacactgta
gattctagtgcactagcagacgacatgccaggtctgataactaaactgtttgatcggtta
gaatctcgttttggtgacatgtttgtacatcatgcattgggttatattactgctgccaag
aacggtctgtccctagctgaactagaggatatcctttcatgcgatgacgaagttttagat
agcattttccagtggtggattccgccaatcaggcgtatacctcctctgctttgggcgcgg
gtcagaaacgaacttggaatttacctcgccgagaagggtacggatggaattagcgcttat
gggtggtatcacagacagttctgggaaactgcggagaaaagatacctccaaaaacccttc
aacaatgacaccgacctctttgtaggaaaggctcatacagccattgcagattactttgag
ggaaaatgggatgatggtaaaccgtataccagcaagggagagacgaaaatcgaagacaga
aagattgcaaaacaatcacttgtgctaggtggtaatcgtagcacggggagacaactgaat
aggagaaaattgaccgaactgccttaccatctcatcaagatagaggaatgggacagattt
agaaagctcgtgattgacctagaatacatagaggcgaagttcgaagccggcgatggttac
aattgtttaagtgaactcatagaagccacgaaactttctggacttgacgatattaaacga
ttgacacgttttgttggatcaaatttaggatttctgatcagggaaccaaccggcgtgtat
cagatggcgcttcaacaggcgagaggaagtaacgtaagggaactgcttggcagattgtca
aaagagaatctacctttgccgttaatggagaatctacacgagtctgactacgacgatccg
tgcgagatgactatgcatggtcatacagagacacttcgatgctgcgactattctcctaaa
ggggaccttattctgtcttctgctgatgactgcactatgcggatatgggatgcaacaaca
ggagcagagatcgtgacaataacgtcacttccggggccgatattcccagataaaaatgag
ggaatgcaattgatgttacatccggtgaatccatcttgcttttcacgctcaggggaaact
attgctaatggtacagagattggtgaagttatgctttgggacaaatccggtgtgcagtta
cattcaaagagcacaccgaacaaggctgtggtatacatacacttttctccagacaaccgg
caaattgcaacagccttcaaaaacagcgttctttcaatttggtcggcagacgacttgagt
cacgtaaaaacagtagattttgattggttagaactgacatgccttgactattccagggat
ggaaagaaactggctgtgatgtgcttaaggggtatgaaaattgtaatgattggattgatc
ctccttgatactgacgggtataatgttacttcgaaagaaaccggaagttgctacaataac
ctctgtagtacatttcatcctagtggttcgcaggttatgacgggcggtgatgatagttgt
gtcagtatatggaacggcaacaacggcacttatcagacaaagctgaaggaacacaatgcc
tggatttggacaatcaagttcaccccagacggtaaacacatgtttactggttcttcggat
aggtctatgaaggtgtggagacagacaggcggaagttggagtgttattgcaaccgtcggg
ggtcattctcacagagtcagcatgatatcactagaggaaaacggaaataagttggtcaca
tcgtccattgataggtcattgaaagtttgggacactgcaactcttctccgcggagcagta
cctcctgtcggcggcggccattacttgacatgtgtgatctcaccgaatggctcttttcta
gctatagcacaaggctggatgaagcagtgtggattgcttgacgctgcacagtttgatcag
tctccagaaacgtacactgacgcccataaaggtttcatcaagatggcccagttctcatcc
gacagcagtcgtttattcgtacttgaccatggtcattcaggcggatatgaggcaggatca
gagaaatacgctgctatagaggtgaggtcactgctaagcggttctagctcatacataaac
gttcagtcgccgtactctttcactttgaccaatacacacgtcgtcgtaggaacattttac
ggtgaacttcacctttttgacatcaatagctactcagaaattttaaaatggaagtcaaga
agtgggggcgctataactagggtggcggcgtgcaatgcagggggcaaatatatgatcgca
gcatgctttggaacagtgtgtcaagtgtgggaattcaatggcagcagtgtcaatttagtt
ggtgatatgagtgaccatgatacagatatttacgatgtggcattttctcccgatggtcat
tatcttgtcaacggcgtcggatcaggaaaactttacatttgggacacgtcaaataaaaat
atctcgctctttagaatagccactgagcatgcgtcgtacataaaggatataaaattttca
acttccggaaattatttagtgacgtcagccggactgagcatgcgcgtgtgggatgttaaa
gatggcatgagcttactttgcacgtactatgccccggttaactgtgcatcatttttcaat
gacagtgtcgtcattgttggcgaggcaacaggcaaccggaagtacctccagtttaggacg
gattacaccaaatcggaagtgactacccagtgtaagatgtga
DBGET
integrated database retrieval system
