Mercenaria mercenaria (northern quahog): 123536568
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Entry
123536568 CDS
T07835
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123536568
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
123536568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
RB_B
Motif
Other DBs
NCBI-GeneID:
123536568
NCBI-ProteinID:
XP_045175809
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All DBs
Position
1:57394832..57446255
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AA seq
752 aa
AA seq
DB search
MSSRMCNQCGCTDIDIDSTRGDAVCTGCGSVLEDQIIVSEVQFQENSGGGSSLIGQFVSS
DGPGKSFSIGGTFPHGMQKESRTVTLQNGKKRIQQLASQMNLNQHCVDTAFNFFKMAVSK
RMTRGRKTTHVIAACLYLVCRSERTPHMLLDFSDALQVNVYSLGRTYLQLSRELCINLPD
IDPALYISRFAHSLEFGDKTHEVSMTAMRLVQRMKRDWMSTGRRPSGLCGAALLVAARIH
DFSRSVKEIIKVVKVCQSTLRKRLIEFEETPSSQLTIEEFQTIDLEEEADPPSFTEGKRR
AKKFQEQSKLPEYASEVSKLQEEIEQTLLNQKPRGIWAHYAKMSDAGSVDSETSRLSDLT
EPEENISEENRNSSLDSLSEIDSFKNESNSAVSSDGTNKNLTKEVFDSGVTESVETDTVT
RDVSDIVGTNLSETENVTREILDSEGTKSLEGSKITPDSVRDELIIGSDVSVLSSNNIKK
ATEVLDGVPGVPTLGPEMETLVTDCMKEGSDNSRDGIEDGELDLTGIDDSEISKYILAEK
EVLLKTRIWMAENAEFLEEMRLKEEKKAKEAEEEAKKPPEKRRKTHKRKKKQPVQEAATA
QEAIQKIMQEKKISCKINYDVLNDLNVKSSTAFSSPVKGDSNVQGILRDNNPSISRLRKA
SVSFDLRPEPEPVTKKPKKADIAPPPMLPQMDVKPTVDVVVVESGPVQYDQKDDVYDDEE
GEDYFEEEDHPVSAAQLFGHTGVEEEYDYDMD
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtcgcatgtgcaatcagtgcggctgcactgacattgatattgactcaacacga
ggagatgcagtatgtacaggttgtgggtctgtgctcgaggatcagatcattgtgtcagag
gtccagttccaggaaaactctggtggaggatcttctctcattggacagtttgtttcctca
gatggacctggtaaatcattctctattggtggaacatttcctcatggaatgcaaaaagaa
tcaaggacggtcaccctgcagaatggtaagaaacggatacaacaacttgccagtcaaatg
aatttgaaccagcattgtgttgatacagcatttaatttcttcaaaatggctgtgtctaag
cgtatgacaagaggaaggaaaacaacacatgtgatagcagcatgtttgtatttagtctgt
cggtcagagagaacaccacatatgcttctagacttcagtgatgctttgcaggtgaatgtg
tacagtttgggtagaacttatcttcaactgtcccgagagctgtgcatcaacctacctgat
atagaccctgccttgtacatatcaaggtttgcacacagtctggagtttggagacaagaca
catgaagtatcaatgacagctatgagactggtacagagaatgaaacgagattggatgtcc
actggtagacgacctagtggtctctgtggagcagccttgctggtggctgcaagaatccat
gatttctcaagatctgtaaaggagataataaaggtggtaaaggtatgccagtcaacactg
agaaaaagattgatagagtttgaagaaacgccatctagtcagttaacaatcgaagaattc
cagactatagacctagaggaggaggctgacccaccatcatttaccgagggaaaacgtcgt
gccaaaaagtttcaagaacaaagtaaattgccagaatatgcatcagaagtgtctaaacta
caggaagagattgaacaaacattgctcaaccagaaacctaggggaatatgggcacattat
gccaaaatgtctgatgctggatctgtggattctgaaacatcaaggctaagtgatcttact
gaacctgaggaaaatataagtgaagaaaacaggaactctagccttgattcgctctcagaa
attgatagttttaaaaatgaatccaattcagcagtgtcttcagatggaacaaacaaaaat
ttaaccaaagaagtgtttgatagtggtgtgacagagtctgtagaaacagacactgtgact
cgagatgtgtctgatattgttgggacaaatctgtcagagacggaaaatgtgactcgggaa
atattggatagtgagggtacaaagtcattagagggtagtaaaattactcctgattcagtt
agagatgaattgataattggatcagatgtgagtgtgttgagcagtaacaatattaagaaa
gctactgaagtactagatggtgttcctggagtacccacccttggacctgaaatggagact
ttggtaactgattgtatgaaggaaggtagtgataattctagagatggtatagaagatggt
gaacttgatctgacaggtattgatgacagtgagattagtaagtacatattagcagagaaa
gaggtgttactgaaaacgagaatctggatggcagaaaatgctgagttcctcgaagaaatg
agattaaaagaagaaaagaaggctaaagaagcagaggaggaagccaagaaacctccagag
aaacggaggaagacacacaagaggaagaagaagcagcctgtacaggaagctgctacagca
caggaggcaatacagaaaattatgcaggagaaaaaaatatcgtgtaaaattaattacgat
gtgttaaacgacttgaacgtgaaatctagcacagctttcagctccccggttaaaggagac
tcaaatgttcagggaatacttcgagataataatccatctatatcacggttgagaaaagca
agtgtcagctttgatctcaggccagagccggaaccagtaactaagaaaccaaagaaagca
gatattgcgccaccacctatgctacctcagatggatgttaaacccacagtagatgttgtt
gttgttgaatcgggaccagtgcaatatgaccaaaaagacgatgtatatgatgatgaggag
ggagaagattactttgaggaggaggatcaccccgtcagtgctgcacagctgtttggacat
acaggtgtagaggaagaatatgattatgacatggactaa
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