Mercenaria mercenaria (northern quahog): 123536892
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Entry
123536892 CDS
T07835
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04080
Neuroactive ligand-receptor interaction
mmer04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123536892
04082 Neuroactive ligand signaling
123536892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmer04040
]
123536892
Ion channels [BR:
mmer04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
123536892
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF6056
Motif
Other DBs
NCBI-GeneID:
123536892
NCBI-ProteinID:
XP_053384656
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Position
17:complement(4686466..4700952)
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AA seq
733 aa
AA seq
DB search
MELNHKVNAFFTILFMLSYVKLNNCASINDTNILLRDLLKVYNKNVRPVENQKNAVHVNT
SLLIVSIQELDEIRGIFSVMGILSVQWHDANMVWNPETYGGVKYVMTSYKEVWVPELILI
NPAEEADTLGKKWQRVYFHHTGYASWWPGDLIKSTCALDVSRYPFDTQECIITFAAWGYF
AGQVKINPINDRVDLSFYTESSTWKLAKSEVNVIDEGTQISFHVYLERKAGFVIVNIVLP
LTFLSLLNAFVFLLLPESGERISYCITVLLSIAVFMTIVSETLPKSSEPVPFISYKLMFD
MVISSVITLVTILNLRLYNRNETENIPHWLQSMYLFLARKRSMSKIRPIKDNAKGKKNEV
NQSKAGNGNTCMNRKGSERRDSRYLTDMHISRKPSVALIDLEEVPNERIEKQLWPGDLIK
STCALDVSRYPFDTQECIISFSAWGYFAEQVKINPANDRVDLSYYTESSTWKIAKSEANV
LPGGMQINFHVYLERKAGFVIVNIVLPLTFLSLLNVFVFLLLPESGERISYCITVLLSIA
VFMTIVSETLPKSSEPVPVISYKLMFDMVISSVITLVTILNLRLYNRNETENIPHWLQSK
YLFLARKRSVSKIRPIKDNAKGKKNEVNQSKAGIGNACMNRKGSERDRRDSRYMLDMHIS
RKPSVALIDLEEVPNERIEKRLVRMISEAEENGDFQTCVNWKNISNMVDGIAFVLFILLS
VFSVVFFMIITFK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaatcataaagtaaatgctttcttcactatactgtttatgttatcatatgta
aaactgaacaattgtgcgtcaataaatgacacaaatattttacttcgagaccttttgaaa
gtttacaataaaaatgtgagaccagtggaaaatcagaaaaacgctgtccatgtaaatact
agcctcttaattgtttctatacaagaacttgatgagattcgtggaatattttcagtcatg
ggaattttgtcagtgcaatggcacgatgcaaacatggtttggaatcctgaaacatatggt
ggggtaaagtatgtgatgacgtcatataaagaagtttgggtacctgaactgattctcata
aaccctgcggaagaagcggatactcttggcaagaaatggcaacgagtttactttcatcac
accggatatgcgtcatggtggcccggggacctgattaaaagtacttgtgctttggatgta
tctcgttatccatttgatacccaagaatgcatcattacatttgctgcttggggatatttt
gctgggcaggtgaaaataaatcccataaatgatcgagtcgatttaagcttttacactgaa
agttcaacgtggaaacttgcaaaatcggaagtaaacgtgatagatgaagggacgcaaata
agtttccatgtctatctcgagagaaaagccggttttgtgatcgttaatatagttcttccc
ctaacctttcttagtttgctaaatgcattcgtgtttctgcttttaccagaatctggagag
agaatttcttactgtatcaccgttttgttatctatagccgtatttatgacaattgtgagt
gagaccctcccaaagagttctgaaccagtaccatttatctcgtacaaactgatgtttgac
atggtgatcagctccgttattactctggttacaatattgaacctgcgattatacaataga
aatgaaacagaaaatattccgcactggttgcaatctatgtatctattcctagcgcgtaag
cgatctatgtccaaaattcgccctatcaaagacaatgctaaaggaaagaaaaacgaagta
aatcagtccaaggccggaaatggaaatacatgtatgaaccggaaaggatcagaacggagg
gattcaagatacctgacagacatgcatatctctagaaaaccatcagtcgcgctaattgac
ttggaagaggttccaaatgaaagaattgaaaaacaactgtggcccggtgacctgattaaa
agtacttgtgctttggatgtatctcgatacccctttgatacccaagaatgcatcatatcg
ttttctgcttggggatactttgctgagcaggtgaaaataaatcccgcaaatgatcgagtc
gatttaagctattacactgaaagttcaacgtggaaaattgcaaaatcggaagcaaacgtc
ttacccggagggatgcaaataaatttccatgtctatctggagagaaaagccggatttgtg
atcgttaatatagttcttcccctaacttttcttagtttgctaaacgtattcgtgtttcta
cttttaccagaatctggagagagaatttcttactgtatcaccgttttgttatctatagcc
gtatttatgacaattgtgagtgagaccctcccaaagagctctgaaccggtaccagttatc
tcgtacaaactgatgtttgacatggtgatcagctccgttattactctggttacaatattg
aacctgcgattatacaatagaaatgaaacagaaaatattccgcactggttgcaatctaag
tatctattcctagcgcgtaagcgatccgtgtccaaaattcgccctatcaaagacaatgct
aaaggaaagaaaaacgaagtaaatcagtccaaggccggaattggaaatgcatgtatgaac
cggaaaggatcagaacgggaccggagggattcaagatacatgttagatatgcatatctcc
agaaaaccatcagtcgcgctaattgacttggaggaggttccaaatgaacgaattgaaaaa
cggctggtaagaatgatttcagaggcggaagaaaatggcgatttccagacgtgcgttaat
tggaaaaatatcagtaacatggtagacggaatcgcttttgtattgttcattttgctttca
gttttcagcgttgtattttttatgattataacatttaaataa
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