Mercenaria mercenaria (northern quahog): 123537331
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Entry
123537331 CDS
T07835
Name
(RefSeq) leucine-rich repeat protein SHOC-2-like
KO
K19613
leucine-rich repeat protein SHOC2
Organism
mmer
Mercenaria mercenaria (northern quahog)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_13
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
123537331
NCBI-ProteinID:
XP_045176947
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Position
17:10644424..10686753
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AA seq
615 aa
AA seq
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MSISKKGNKGKGNDAVASRLADFTGEKEIPIAGHSKMSSLEQEDANSGPECDPSVNDLAN
SLESSSLIYSRETGKDKKSGGACANPAASQQPSNLVKTVYLQMPGQRQPKQISRRNPLKA
DLDVGKVFKKCKEDQSTRLDLSKSQITVILPTVKELVHLKELYLYGNKIVQLPIEIGCLV
NLETFALNENSLTNLPDTMEDLKKLRLLDLRHNRLTEIPEVVYQLRSLTTLLIRFNRIRT
VGDGIRNLTNLTMFTLRENKIRELPKGIGCLVHLSTFDVSHNHLEHLPTEIGNCVMLSSL
DLQHNELLDIPDSIGNLRSLTRLGLRYNRLTCVPASLANCTLMDEFNVEGNNISTLPEGL
LSSLTSLKSFTVPRNAFQSYPTGGPSQFVSVESINMEHNQINKVPYGIFSAAKCLSKLNM
KDNQLTSLPLDIGQWTNMVELNLGTNQLTRIPDDIQNLEKLENLILSNNSLKRLPASIGN
LKKLQVLDLEENKLESLPQEIGQLRELRRLVVQTNQLTSLPRAIGCLSNLQYLGAGENHL
TSIPTEIGALESLESLYINDNAELHSLPYELALCYNLQIMSIENCPLSQLPPEIVARGPS
LVIQFLKMNGQYCNM
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatatctaaaaagggcaataaaggaaaaggaaatgatgctgtagcttcaagactt
gcagactttactggagaaaaagaaatccctatcgctggtcatagcaaaatgtcgtcatta
gaacaggaggatgcaaattcaggcccagaatgtgaccctagtgtaaatgaccttgcaaat
tcactggaatcttcttctttgatctactctcgagaaactggaaaggataaaaagagtggc
ggggcttgtgcaaatccggcagccagccaacagccaagcaatcttgtcaagacggtttac
ctgcagatgccaggacagaggcaaccaaaacagattagtcgtagaaacccactcaaagct
gatctcgatgttgggaaagtgtttaagaaatgtaaagaagatcaatccactaggttagat
ctgagtaaatcacagattactgtgatactaccaactgtgaaagaactggttcacctgaag
gagttatatctctacggcaacaagattgtccagttgccaatagagatcggctgcctggta
aacctagagacatttgcattgaatgaaaactctctcacaaatctaccagatacaatggaa
gatttgaagaagctgagattgctggatctgaggcataatagactcacagagattcctgaa
gtggtgtaccagctgagatctctgactacactgttgattaggtttaacaggattagaacg
gtcggcgatggcattaggaatcttacaaatttaacaatgttcacattaagagagaacaag
atacgtgaattaccaaagggcattggctgcttagtgcatctaagtacatttgatgtctct
cacaatcatttggagcatttacctacagagataggaaattgtgtgatgttaagttcttta
gatctccagcataatgagcttttagatattcctgactctataggcaatctccgatccttg
acaaggttaggtctaaggtataatagattgacgtgtgttccagcatcattagctaactgt
acactgatggatgaattcaacgtagaaggaaataatatatcaacattgcctgagggtttg
ttgtcgagtttaacaagtttgaagtcattcactgtaccaaggaatgcatttcagtcatat
cctactggaggaccgtcacagtttgtctcagttgagtcaatcaacatggagcacaaccag
ataaacaaggttccatatgggatattttctgcagctaaatgtctctccaagttaaacatg
aaagataatcagctcacctcactacctctagatattggccagtggacgaacatggtggaa
cttaatctaggaaccaatcagctcactcgtatacctgatgatatccagaatttagaaaaa
ttagaaaaccttatacttagtaataactcattaaagagattacctgcaagcataggaaac
ttgaaaaaactacaagtgctagatttagaagaaaacaaattagaatccctcccacaagaa
ataggtcagttacgagaattacggcgtctagtggtacaaacaaatcaacttacgtcatta
ccaagagctatagggtgtttaagtaatttacaatatttaggtgctggagaaaatcatctc
acttccataccaacagaaataggtgctctagaaagtttagaatccttgtatataaatgac
aatgccgagttacattcgctaccgtatgagctagcactgtgttacaatctgcaaattatg
agtattgaaaactgtcctctcagtcagctacccccagaaatagtggcacgaggcccatca
ttagtgatacagttcttaaaaatgaatggccagtactgcaacatgtga
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