Mercenaria mercenaria (northern quahog): 123537659
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Entry
123537659 CDS
T07835
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123537659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123537659
Membrane trafficking [BR:
mmer04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123537659
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
Clathrin
Motif
Other DBs
NCBI-GeneID:
123537659
NCBI-ProteinID:
XP_053384249
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Position
17:complement(57783431..57815201)
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AA seq
861 aa
AA seq
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MSIKAFDLVPAIERVHLMSEKAKTQIECIDVCGKNLYIGTNDCFVVHYIIEERSSHSGKT
SFHSDKQGHKYLTLKKPIVQLKAASALNRILVLCDHNLTMLNMLDLEPAVGGAKIKGVTH
FCLNENPVQSSPFSVEVCVALKKKQLQLYNITDDKMIHVKDISLSEPASVIGLDGHVVCA
AMMSLYCMVNYETGQNTDLFPIDTEHTLPIVKRISKEEFLLTGPSALGMFVTSEGISQRP
PLQWSENLRSVGYVHPYIIAMNDEFITIHSILDQQQKQAIPFQGGVVLNDFDGRLFIASQ
KEIYSLVPVAWEKQVQGLLADKRTQEALDLAKNANHAGLTKDKFLKIYRRIQQQAAFIEF
SQRNFDEAQDLFKSGQVDIREVISLYPRLMPSSSSFQRSMPGLHEIADINQLARGDQNVI
SQYKTFLITYLEDIRGTKDSHGLKQEIDVALLKLYAERNSPELVPLVEEDSGCELKDCVE
WLEKYNRHHALALLYKYHGDNDKALNIWTRLVNGDIQDQLFPGFEFVVNFLSSLSDHDLV
WKYIDWALERDQEFSIKILTERPAQEPPSERLRSDTVIDYLHRYPKAVVTYLEYLIFQRK
LEKEKYHTHLAVLYLDNVLQLMKNNSVKKEQIDMARSKLRHMLQMSSLYRVQLILGKAKE
QEMHAECAILYGKLEDHEKALKILVHKLRDYGAAENYCLVNSEGHDSNYRKRLFHILLSV
YLDPANEKKDLMVEPAIKLLNSNVADFDVAKVIQIIPDNWSIALLSEFLKKAVRTNMHSQ
RMTRVERMMSRGENLLVKEISIEEQREPVVMTEEKLCAVCNRPFNEPSFVRYPNGIITHT
HCAKNKHVCPVTGKLFCTKKS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaaagcctttgaccttgtgcccgctattgagcgggtgcatcttatgtcagaa
aaagcgaaaacacagattgaatgtatcgatgtgtgtgggaagaatctgtatattggcaca
aatgattgttttgttgtgcattatatcattgaagagagaagctctcattctggaaagaca
agtttccatagtgataaacaaggtcacaagtacctcaccttgaaaaagccaattgtacaa
ctgaaggcagcatcggctttgaacagaatccttgtactatgtgaccacaaccttaccatg
cttaacatgcttgatcttgagcctgcagtgggaggagctaaaatcaaaggagtgacccat
ttttgtttgaatgagaatccagtacagagtagtccatttagtgtggaggtgtgtgtagca
ctgaagaaaaagcagttacagttatacaatattacagatgataagatgatacatgtgaaa
gatatatctctgtcagaaccagccagtgtcataggtttggatgggcatgtagtatgtgca
gcaatgatgtcactgtattgtatggtaaattatgagacaggacagaacacagatcttttc
cctattgatacagaacatacactacctattgtgaaaaggatcagtaaggaggaatttctt
ttgactggtcccagtgcattaggtatgtttgtaacatcagaaggcatttctcagcgaccg
ccattgcaatggtctgaaaacttacggagtgttggttatgtacatccatacatcattgcc
atgaatgatgagtttattacaatacacagtattttagatcagcagcaaaaacaggctata
cctttccaaggtggggtcgtgctcaatgattttgatggacgtttatttatagcctctcag
aaagaaatatactccttggtgccggttgcttgggagaaacaggttcaaggtctgctggca
gacaaaaggactcaggaggctctggacctagccaagaatgccaaccacgctggactaacc
aaagataaattcttaaagatatatcgcagaatacagcaacaggcagcatttatagagttt
tcacagagaaattttgacgaggctcaagatctatttaaaagtggtcaagttgacataaga
gaggtaatcagtctgtacccaagactgatgccatccagtagtagttttcaacgcagtatg
cctggcctgcacgagatcgcggatataaatcagttggcacgtggagaccagaatgtgata
tctcagtacaaaaccttcctcatcacatacctagaggacatcagaggcaccaaagacagt
catggtctcaaacaggagattgatgtcgcattattaaaactttatgcagagcggaattct
ccagagttagttccccttgtagaagaagattcaggttgtgaattaaaggattgtgtggaa
tggttggagaaatacaatcgccatcatgcactagcattgttatacaaatatcatggagat
aatgataaagcattaaatatatggactaggcttgtgaatggagatatacaagatcaatta
tttcctggttttgagtttgtagtaaattttctttcaagtttaagtgaccatgacttagtc
tggaaatatattgactgggctttagaaagggaccaggaatttagtattaagattctgaca
gagcgtccagcccaggaacctccctcagagagattacgatctgatactgtgatagattat
ttacatagatacccaaaagctgttgtcacatacctggagtatttgatatttcaacgaaaa
ctagagaaagagaaataccacacccatttagcagtgttatatttagacaatgtactgcag
ttaatgaagaataatagtgtgaaaaaggaacaaattgatatggccagatccaagttgcgg
catatgttacagatgtcaagcctgtatcgtgtacagttgattcttggcaaagccaaggaa
caagagatgcatgctgagtgtgcaatattgtatggcaagctagaggaccatgaaaaagca
ctgaagattttggttcacaagttacgagattacggagctgctgaaaactactgtctcgtc
aactcggaggggcatgactcaaactacagaaaacgtctcttccatatacttcttagtgtg
tacttagaccctgcaaatgaaaagaaagatttaatggtagaaccagcaataaaactgctc
aacagtaatgttgccgactttgatgttgctaaggtgatacaaattatacctgacaactgg
tcaatagcattattgtcggagttcttgaagaaagctgtacgtaccaacatgcattcgcag
cgtatgacgcgtgtagaacgcatgatgtccaggggagagaacctacttgtgaaagaaatc
agtatagaggagcagcgagaacctgttgtcatgaccgaagaaaaactttgtgcagtgtgc
aatagaccatttaatgaaccatcatttgtgcgttatccaaatggcatcatcactcataca
cattgtgctaaaaataaacatgtgtgcccagtgactggaaaacttttctgtaccaaaaag
tcatga
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