Mercenaria mercenaria (northern quahog): 123537742
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Entry
123537742 CDS
T07835
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123537742
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmer02000
]
123537742
04147 Exosome [BR:
mmer04147
]
123537742
04090 CD molecules [BR:
mmer04090
]
123537742
Enzymes [BR:
mmer01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
123537742
Transporters [BR:
mmer02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
123537742
Exosome [BR:
mmer04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123537742
CD molecules [BR:
mmer04090
]
Proteins
123537742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
AAA
Rad17
RsgA_GTPase
AAA_29
AAA_30
AAA_5
AAA_7
AAA_28
AAA_25
SbcC_Walker_B
AAA_18
DUF815
DUF2140
Motif
Other DBs
NCBI-GeneID:
123537742
NCBI-ProteinID:
XP_045177443
LinkDB
All DBs
Position
18:complement(14334616..14375667)
Genome browser
AA seq
1279 aa
AA seq
DB search
MEEVDEKQPLLSNDTSLTINKLSYTESGGDKSDTSKDEKKDDKKTATFGQLFRTSDCLDI
FLMFIGSLAAMVHGAGWPVLMIFFGDMTDSFINVNVSDINPNDTSALFDEFNSDMTKYSL
YYIYIGAAVFVASYIQVACWTVACERQVHRIRKQFFRAILRQEIAWFDVHQSGELTTRLA
DDLERVREGLGDKFSYAIQFLAQFSSGFAIGFWKGWKLSLVMMSLSPLLAIGGAFLSKLI
ANFSKREQEIYAEGGGVAEEVLSCIRTVASFNGQNQDLKRYEEKLDYCKKLGIRKSYVSG
FGVGFTMLVMFSAYALAFWYGTEQVKSGDMTGGKVLTVFFCVLIGTFSIGNITPHVTSIA
GAKGAAAVLIDIIDNDPEIDASSRDGEILADIHGNIEFKDVEFTYPTRKEVPVLKGFDMT
VRPGQTVALVGPSGCGKSTAVNLVQRFYDPDRGSISVDGRDIRGLNLKSLRNKIGVVSQE
PILFGISIKENILLGRPDARHEEMVQAAKESNCHDFITKLPQGYDTLVGERGAQLSGGQK
QRVAIARALIRDPKILLLDEATSALDTQSERTVQDALDKARQGRTTIVIAHRLSTIQNAD
VINVVQDGVIVESGKHSDLMAKQGTYHQLVTVQMLIEEDEEVEEADEENGDLVPNGIPRK
RTISENKQIKKSVSRQFSKQVSKVGLAEDEKKGEEEVETAPGAKFCPMLRENKPEWPFIV
IGCMSAAVNGCTMPAFAIFFSEMIKVFMNNGENSLFWSMMFLVLGGVQFATNALQSICFG
QSGERLTFRLRLRTFRSFMRQDMSYFDDPKHATGALTTRLATDASLVKNATGIRLATLVQ
SVFGLAAALTIAFIYGWKLAFVVLAGVPLMAIAGALQLRIVMGTQKKDNKELEAAGKTAS
EAIENVRTVQSLTREPDFFIKYSKSLNKPYKTNLKMAQLTGLTVGFSQGIVFMIYAGAFR
FGAYMVTTGDMTPDNVFKVFFAISMTGMVIGQSSSFLPDYSKAATAAGLIFKVLDTIPLI
DVFSKRGQYLSKISGHVQFRNVQFNYPMRPDVPVLKGIDLEIKPGQTVALVGPSGCGKST
VVSLLQRFYDPQEGTITVDGLNIKDINLVRLRYLISVVSQEPILFGCSIKDNITYGLDTP
VSMDDVISSARAANIHEFISNLPSGYDTEVGEKGTQLSGGQKQRVAIARALVRNPTILLL
DEATSALDTESEQVVQAALDNAQEGRTCIVIAHRLSTIQNADVIYVIDSGKVVESGNHQQ
LLNKKGVYSTLVSGQQLSK
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtagacgaaaaacaacctctattatctaacgatacaagccttaccataaat
aaactgtcatatacagaaagtggcggggataaatcagatacaagcaaagatgaaaagaaa
gatgacaagaaaacagcgacattcggacaactgttccggacgtccgactgtttggacatt
ttcctgatgtttataggatcgctggcagccatggtacatggtgctggttggccagtgcta
atgatcttctttggtgacatgactgactctttcataaatgtaaatgtatctgacataaat
ccgaatgacacgtcggcattgtttgacgaatttaactctgacatgacaaaatactctctg
tactacatctacattggtgccgctgtcttcgtggcctcatatatacaagttgcatgttgg
acagtagcctgtgagagacaggttcaccggatacggaagcagtttttccgcgccatcttg
cggcaagaaattgcttggtttgatgttcaccaaagcggagaactaactactagattagcc
gatgatctcgagcgagtccgcgagggcctgggcgacaaatttagttacgcaatacagttc
ctggctcagttttcatctgggtttgctatcgggttttggaaaggctggaagctctctctg
gttatgatgtcattgtcgccattgcttgctattggtggagcttttttatcaaaactgata
gcaaatttttccaagagagaacaggagatttacgcagaaggtggcggtgtggctgaggag
gtgttgtcgtgtatcagaactgtggcgtctttcaacggtcaaaatcaggacttaaaaaga
tacgaggagaaacttgactactgtaagaaactgggtatcagaaagtcctacgtttctgga
ttcggtgtaggattcaccatgcttgtcatgttctcggcctacgccctggcgttttggtat
ggtacagagcaagtaaaatctggagacatgacaggaggaaaagttctaacggtgtttttc
tgtgtgctgattggtacattttccatcggcaacatcactcctcacgtcacgtcaatagcc
ggggcaaaaggtgctgccgccgttctgattgacattattgacaatgacccagaaattgac
gctagctcgcgtgatggggagatcctggcggatatacatggaaatatagaattcaaagat
gtcgagtttacttatccgactagaaaagaagtgccggttttgaaaggtttcgacatgacc
gtgcgacccgggcagacagtagcacttgttggacctagcgggtgtggaaaatctacagct
gttaatcttgtacaaagattttatgatcctgatagaggaagtatttctgttgatggtaga
gacatccggggcttgaacttgaaaagcctcaggaataaaatcggcgttgtttcacaagaa
ccaattcttttcgggatatccatcaaagaaaatatcttgcttggtcgacctgatgccaga
catgaggaaatggttcaagctgcaaaggaatctaactgtcatgattttattacgaaacta
cctcaggggtatgatactcttgttggtgaaagaggggctcaattatcaggtggacagaaa
caaagggtagcaatagccagagcccttattagagacccgaagattttgcttttggatgag
gcgacatctgcgcttgacactcaaagtgaaagaaccgtgcaggacgccctggataaggca
agacaaggtagaacaacgatagtaattgcccataggttgtcgaccattcagaatgcagat
gttattaatgtagtacaagatggtgtaattgtcgagtcaggaaaacactctgatttaatg
gcaaaacaaggaacttaccatcagctggtcaccgtacagatgctgattgaggaagacgaa
gaggtcgaagaagctgacgaagaaaatggagacctagttccaaatggcattccgaggaag
aggactatatcagaaaacaaacaaataaaaaaatcagtttctagacaattttctaaacaa
gtttcaaaggtgggattagccgaggatgaaaagaagggagaagaagaggtggagacagcc
ccaggagcgaagttttgcccgatgctacgagaaaataaacccgagtggccgtttatagtg
atagggtgtatgtcagctgctgtgaacggttgtacaatgccagcttttgctatcttcttc
agtgaaatgatcaaagtatttatgaacaatggtgagaacagtttattctggagtatgatg
ttccttgtactcggtggtgttcagtttgcaacaaatgccctgcagtcaatttgcttcggt
caatccggcgagagattaacattccgtttgcgtttgaggacattccggtcgtttatgcgc
caggacatgtcatatttcgacgaccctaaacacgccactggagccctcaccactcggctg
gcaacagatgcctcactcgtgaaaaatgcgactggtattcgtttagcaacactagtacag
tcagtgtttggtctagctgcagccttgaccatagcttttatctacggctggaaattggct
tttgttgtgttagccggagttcctctaatggcaatagcaggtgcgctacaattacgaatt
gtcatgggcactcagaagaaggataataaagaattagaggcagctggaaagactgcaagt
gaagcgatagaaaatgttaggacagtacaatctctgacgagagaaccggacttcttcatt
aaatattccaaatctttgaataaaccttacaagacaaacctgaagatggcacagttaact
ggtctcactgttggattttctcaaggcatagtttttatgatatacgcaggagcatttcga
tttggtgcatacatggtaacaacaggagatatgacccctgacaatgtattcaaagttttc
ttcgcaatctcaatgacgggaatggtgattgggcagagtagttcatttctaccagattat
tcaaaagccgccactgccgctggtctcatatttaaagttctggatacaattccactcata
gatgttttctcaaaacgaggacagtatctgtccaaaatatccggacatgtccagttcagg
aatgttcaatttaattaccctatgcgaccagatgtgccagttctgaaaggtattgacctc
gagattaagccaggacaaacagtcgcgctagtaggtccgagtggatgtggaaagtcgacc
gttgtttcactgcttcaacgcttctatgatccacaagaagggaccataacggtggatgga
ctaaacatcaaagatataaatctagtgagactgagatatctgataagcgtagtcagtcaa
gaacctattctgttcggttgtagtataaaagacaatataacatatggtctagatacacca
gtgtcaatggacgacgttatttcatccgccagagcagcaaatatacatgaatttatttct
aatttaccatccggttatgatacagaagttggagagaagggcacgcagttgtctggagga
cagaagcaacgtgtagctatagcaagagcattggttagaaatccaacaattcttctcctc
gatgaagctacaagtgctttagacacagaaagtgaacaggttgtacaagcagcgttggat
aatgcacaagaaggaagaacatgcatagttattgcacatagactgtctacaatacagaat
gctgatgtgatctacgtcatcgattccgggaaagttgtggaatcaggaaatcatcagcaa
cttttgaacaaaaaaggagtttactccacacttgtgtcaggacagcagctttctaaataa
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integrated database retrieval system
