Mercenaria mercenaria (northern quahog): 123537795
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Entry
123537795 CDS
T07835
Name
(RefSeq) cys-loop ligand-gated ion channel-like isoform X1
KO
K05195
glycine receptor alpha-3
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04080
Neuroactive ligand-receptor interaction
mmer04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123537795
04082 Neuroactive ligand signaling
123537795
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmer04040
]
123537795
Ion channels [BR:
mmer04040
]
Ligand-gated channels
Glycine
123537795
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Clc-like
DUF6773
DUF2177
Motif
Other DBs
NCBI-GeneID:
123537795
NCBI-ProteinID:
XP_045177552
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Position
18:complement(49612994..49759555)
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AA seq
453 aa
AA seq
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MRGSYMVRSFWIITNKMSTAIAYSFMAMDKRQRNDVPEVNRRCSNNSEKYLNAGYDNTSE
STLSRSLKRRPRKRSSSSTRSKKDPRVKVEIVVQFFKVGEIDTLKEQFNADVIVKAKWRE
PTLDGQQTTADAIDFARLWSPKLYIENSLGDPKEQIRHRIIYNEKGEAFIYEKRVAKGTF
MENLELDDFPFDVQDLTITVASELPISECELVEDKDEHHVVNRQSFVDEQEWHLYVHTEC
NKKELVIDQVDNSVKRSALSVKCRAARRPGYFVWNIFMITFLICSLAFATFSVEKDLPQN
RLQLSFTLVLTAVAFKSVVNSSLPRISYLTYMDKYLLVSMVMLSAVCTWHAIVTRLNYNR
KYADHVENIVLTILSVLYIVYNIGFIVIIYLFPCKKRRIMSQKDKEYKRNRRSFRQKSVY
VDSLSRTQVAKYKRKPRRQALEQNENINVTAKY
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggttcgtacatggtgcgcagtttctggattattacaaataaaatgtccacagcg
atagcgtacagcttcatggccatggataaacggcaacgaaacgatgtaccggaagtgaac
cgtcgctgtagcaacaactcagaaaaataccttaacgccgggtatgacaacacgagtgag
agcacattatcaaggtcactgaaaaggcgcccaagaaagaggtcatcttcaagtacacga
tcaaaaaaggatcctagggtgaaggttgaaattgtggttcaatttttcaaagtcggcgag
atagatacgctcaaggaacaatttaatgctgacgtcatcgtaaaagcaaaatggcgggaa
ccaacgttagatggtcagcagacgacagcagacgccatagactttgcacggctatggagt
ccaaaactgtacatcgaaaattcccttggcgatcctaaagaacaaatccggcatcgtata
atctacaatgaaaaaggggaggcatttatatatgagaaaagagtggcgaaaggaacattt
atggaaaatttagaattagatgattttccattcgatgtacaggatttaacaattactgtg
gcctctgagttacccatcagtgagtgtgaacttgttgaggacaaagatgaacatcatgtt
gtaaatagacaatcgtttgttgatgaacaggagtggcatttatatgtgcacacagagtgt
aataagaaagaacttgtgatagaccaggtcgacaattccgtaaaacgttcggccctttcc
gtaaaatgccgagctgcacgtcggcctggttattttgtttggaatatatttatgataacc
ttcctgatctgtagtttagcgtttgcaacattctcagtggaaaaggaccttccacaaaac
aggctacaattgtctttcacacttgtcttaacggcagttgcgttcaaatctgtagttaat
tcaagtcttccacgaatttcttacctcacttatatggacaaatatttattagtttccatg
gtaatgttatcggcggtatgcacgtggcatgccattgtcacgcgcctcaactacaataga
aagtatgcagaccatgtagaaaatatcgtgctaacaattctcagtgttctctatatcgta
tacaacattggcttcattgtgatcatctatctgtttccttgtaagaaaagacggataatg
tctcagaaagataaagaatacaagcgaaatcgacggtcatttcggcaaaaatcagtatat
gtggattccttgagccggacacaagtagcaaaatacaagcggaaaccccgtcgacaggca
ttagaacagaacgaaaatataaatgtaacggccaaatactga
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