Mercenaria mercenaria (northern quahog): 123538336
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Entry
123538336 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123538336
KO
K08701
nuclear receptor subfamily 1 group D member 3
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123538336
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmer03310
]
123538336
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
123538336
Nuclear receptors [BR:
mmer03310
]
1. Thyroid hormone like
1D. Rev-Erb
123538336
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Phage_T7_Capsid
Motif
Other DBs
NCBI-GeneID:
123538336
NCBI-ProteinID:
XP_045178292
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Position
18:complement(8126956..8193625)
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AA seq
1124 aa
AA seq
DB search
MSVIMGKEASLDGLEFDGDTVLCRVCGDKASGFHYGVHACEGCKGFFRRSIQQKIQYRPC
LKNQQCNIMRVNRNRCQYCRLKKCIAVGMSRDAVRFGRVPKKEKARIIEQMQKSNLQMAA
TALSSALSTQDMVQSVILAHHQTSELGPEKAKVMREIALLQNDYVDCPAHMACPLNSNAG
SDNTDNQDWTDFSEFFAPAIKSVVDFAKLIPGFLLFNQDDQVTLLKAATFEVLLIRMACL
FDTESNTMMFANGKLFRRQTAGLSTSVGFLLDSMFDFAERFNKLNLNDDELALFCAVVLL
SPDRPGLRQVDQVEKVQSKLTESLQNIINANHKEDNTLFAKLLMKTTDLRTLNALHSEKT
VGPSERSDDSSVEMQDSQSDIRSEDLTPSDSLSSINTITSSSTMDTASSMYDSNGSLIHQ
QNRFSGESPHQQQIVLKTPYGTFYREDTGYYGMVPDQPRRRCHTLDRDSQISRPRLHTIE
EGSRRRYTMDREYISKVVGKLSDRLEKRTHVNSMPGSVNSSACSSPVPILEEQYTFMNRN
RDFIPISTPDSSACSSRTSPSFHKDTLQPFASSPNSPRPRSGSIGTDDFGPMQRPRCASF
HVNSEGHAAQGRSYTDGDYLTADGQQYKMSAEMRRGSVGASYNLHAKKKSLLVDRHPAYL
SQNLMPDAMFRKSEKQRSPLALDDSNKRSHIGSGKSAFEQVPHLNMPTSLTWGSNLLGRQ
DKPEAPKVSVTVEDFSTQHGGDKFNLESNRAISPNNSSRNSPEMEIKTEEVYHKKFDKMR
KHPIAQSEETRQMENLSLHDVEQMESEDIGVGDNSSNTLTENELNSEKCKKSARDAHPQL
LAQLKSGPQYSPNIHPAFQIAAGPQHAAGTQSFNLHHIQQQPQNASNPNSVVDAMKNHNS
ISPNNIVLSVPKAPFVNHSPQSSSTTLNMTQSMRKDHPCLQNILNRHDTQQSRGEQFHIV
DSSAFLSNNKQVRTSSAENGHKQGLSQQEIQHFRNGQQQLQQQQQQQQQQQQQQQQQQQM
YPGFTTHTGFDPQSVMMQNPYMIYQQIMMQQHGTRAPQYNEHLAGMQQMVYGGNTQQLRR
CSGGDIPLNLAQPNGLSQSSSQSSGSVDASSNDLIQNIKEEVIS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttataatgggcaaggaagccagccttgatggtttagaatttgatggtgatact
gtgttgtgcagggtatgcggtgacaaagccagcggtttccattatggcgtccatgcttgc
gagggatgtaagggatttttccgaaggagtatacaacagaaaattcagtatagaccatgc
ctgaaaaatcagcagtgtaacataatgcgagtgaacaggaaccggtgtcagtactgcagg
ctgaagaaatgtatcgccgtgggcatgtccagagatgcggtacgttttggtcgagttccg
aagaaagagaaagcaagaatcatcgagcagatgcagaagagtaacctccagatggctgcc
acagcgctgtcgtctgctctaagcacccaagatatggttcagtctgtaattttagcgcat
catcagacgagcgagcttggtccggaaaaggcaaaagtgatgagggaaatagctctgtta
cagaatgactatgtagattgtccagctcatatggcatgccccctgaactcaaatgctggc
agtgacaacacggataatcaggattggacagacttctccgagttctttgctcctgccata
aagtctgttgtagactttgctaagctcattccaggctttctactgtttaatcaagatgat
caagtcactttattgaaggcagcaacatttgaagtactgttgattcggatggcatgcttg
tttgacacagaatctaacactatgatgtttgcaaatggaaaactgtttagacgtcaaacc
gctgggttgtccacaagtgttggttttctgctggactcgatgtttgattttgctgaacga
tttaacaagttgaacctgaatgacgacgaacttgccttattttgtgctgttgtacttctg
tctccagatcgtccaggtttgcgacaagttgaccaggtagagaaagtacagagtaaactc
acagaaagtctacaaaacataatcaatgccaaccacaaggaggataatactctctttgct
aagctactcatgaaaacaacagatttacgtaccttgaatgctcttcattctgaaaaaaca
gttggtccttcagagagaagtgacgacagttcggtggaaatgcaggattctcagtctgat
attagatctgaagatttaaccccgtccgactcattgtcatccataaacacaattacatcc
tcgtcaactatggacactgccagttcaatgtacgatagtaatggctcattaattcatcaa
caaaacagattctcaggagagagtcctcatcagcaacaaattgtgctcaaaactccctat
gggacattttatcgtgaagatacagggtattatgggatggttcctgatcagccaagacgc
agatgtcatacacttgatagagattcacaaatttctcggccaagattacacacgattgaa
gaaggctcgcgaagacgttacacaatggatagagagtatatatctaaagtggttgggaag
ttaagtgacaggcttgaaaaaagaacacatgttaatagcatgcctgggtctgtaaatagc
tcagcatgctcttcaccagttcctatacttgaagaacagtacacattcatgaacagaaat
cgtgatttcattccaatttccacgccagattctagtgcatgtagttcgcggacaagtccg
tcatttcataaagacactctccagccatttgcatcttcaccaaactcacctcgaccgcgt
tcgggttccattggcacagatgactttggcccaatgcagcgaccgcgttgtgcaagtttc
catgtcaactccgaaggtcatgctgctcaaggtcgttcatacacagatggagattatttg
acagcagacggtcagcagtacaaaatgtctgctgaaatgaggcgtggaagtgtcggggca
tcgtataaccttcatgcgaaaaagaagtccttgttggttgataggcatccggcatacctg
tcgcagaatctgatgccagatgctatgtttagaaaatcagagaaacagaggtcaccactg
gccctggatgattctaataagcgaagtcacattggaagtggaaaaagtgcttttgagcag
gtgccccatcttaatatgccaacctctttaacatggggttcaaatcttcttggcaggcaa
gacaagccggaagcgccgaaggtatctgtcacagtcgaggacttttctacacagcatgga
ggagataaatttaatttagagtcaaatagagcgatctcaccaaacaactcttcaagaaac
tctccagaaatggagattaaaacagaggaagtctatcacaaaaaatttgacaaaatgagg
aagcatcctattgcacagagcgaggagacaagacagatggaaaatttatctcttcatgat
gtagaacaaatggagagtgaggacattggtgttggtgataactcatctaacacattgaca
gaaaatgaattaaatagtgaaaaatgtaagaaatctgctcgtgatgcccatccacaattg
cttgcccaattgaagtctggtccccaatacagcccgaacattcatcctgcatttcagatt
gcggctggtccgcagcatgcggcgggtacgcagagctttaatcttcatcatatccaacag
cagccacaaaatgccagcaatccaaacagtgtagtggatgcaatgaaaaatcacaatagt
atatcaccaaacaacatagttctgtctgtgcctaaggccccatttgtgaatcacagtccg
cagagttcatccacaacattaaatatgacgcagtccatgcgtaaagaccatccatgcttg
caaaacatcctcaatagacatgatacacaacagtcaaggggcgagcagtttcacatagtt
gatagtagtgcttttctgtccaataacaaacaggtcaggacgagtagtgcggagaacggt
cacaagcaaggcctgtctcagcaggagatccagcacttcagaaatggtcagcagcagctg
caacagcagcaacagcagcagcagcaacagcagcagcaacagcagcagcagcagcaaatg
tacccgggttttactactcacacaggttttgatccacagtcagtcatgatgcagaaccct
tacatgatataccagcagataatgatgcagcaacatggtacaagagctccacagtataat
gagcacttggcgggcatgcagcagatggtatatggaggtaatacacagcagttaagaagg
tgtagtggaggtgatattcccttaaatttggctcagcccaacggattgtcacagtccagt
tctcagtccagtggatctgttgatgcgtcaagcaatgacttaatacaaaacattaaagag
gaagtaatttcttaa
DBGET
integrated database retrieval system
