Mercenaria mercenaria (northern quahog): 123538359
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Entry
123538359 CDS
T07835
Name
(RefSeq) aprataxin-like
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123538359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123538359
Enzymes [BR:
mmer01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
123538359
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
123538359
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
123538359
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
123538359
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
123538359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
CwfJ_C_1
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
123538359
NCBI-ProteinID:
XP_045178329
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All DBs
Position
18:19425731..19436245
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AA seq
206 aa
AA seq
DB search
MAEGVSKKRKVENEKRENDKKPVKKFAGHWSQGLLDTMNDPEFIVESDDKMTIIKDKYPK
AKYHFLVMPKETIPNLKSLKSDHLDLLKHFEEKGRALAKKTDAKVKFRFGYHSVPSMSHL
HMHVISQDFNSPCLKTKKHWNSFTSEYFVDSEEIIKMLEKDGKVHFDVKDSQSLLNQDLR
CHVCKKAQKNMPTLKDHIKMHDYSVD
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggcgtaagtaagaaacgaaaagttgaaaacgaaaaacgtgagaatgataag
aagcccgttaagaaatttgcaggtcattggagccagggtctcctagataccatgaatgat
ccagaattcatagtagaatcagatgacaaaatgacaattattaaagacaagtatcccaaa
gccaagtatcatttcctggtgatgcctaaagagacaattccaaacttgaagagcttaaag
tctgaccatttagatctgttaaaacattttgaagagaaagggagagcactggcaaaaaaa
acagatgcaaaagtgaagttccgatttggatatcattcagttcccagcatgagccatcta
catatgcatgttatcagccaggacttcaacagtccctgtctcaagaccaagaagcactgg
aattccttcacctcagaatactttgtagattctgaagaaattataaaaatgttagaaaaa
gatggaaaagttcattttgatgtcaaggattcccagtcattattaaaccaagatttgaga
tgtcatgtgtgtaagaaagcacagaagaatatgcctacactgaaagaccacataaagatg
catgactattctgtagactga
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