Mercenaria mercenaria (northern quahog): 123538494
Help
Entry
123538494 CDS
T07835
Name
(RefSeq) chitin synthase chs-2-like isoform X1
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer00520
Amino sugar and nucleotide sugar metabolism
mmer01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
123538494
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mmer01003
]
123538494
Enzymes [BR:
mmer01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
123538494
Glycosyltransferases [BR:
mmer01003
]
Polysaccharide
Structural polysaccharide
123538494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
123538494
NCBI-ProteinID:
XP_045178581
LinkDB
All DBs
Position
18:14617555..14668240
Genome browser
AA seq
1566 aa
AA seq
DB search
MTEAKRNEESEEWPAAFSARWDRFEEVSEERILSEDHVFWDKAYWVTKVIFSGLLFVLVL
CSAVVSKGVLLVLTWNIFTPAEVNATRSGLKTLDGHFHYNITVSTGNRNITLDDGDTVTD
INFIWALFLMVVAPNIFTIIFYTWRLIFRKTGKLKWFPLSVALISATLHSIGLSFFAFYL
LPSMDPISGLWYSSSITLVPSVVQLAFTGKAIALRHNDTNKIEDSYEDISSETQVLPEND
NSNGTATPRRTGISFKTAWPLLASILACVFSATSLCLWGVYVASASQPAVSAGRAMLFIL
SPILVSFGWWEIFVPSQKTLVVDKDGIKVKNESSENGENENNNTPKESEGNLKSNDQKKY
GNTFWSRIYDLKYQTYKGRFKIYTIVNVWKVILTFVLVIVIYSLSCNDSSNCIDALFGKR
QQPAKQGSDFFGSTFLLNGGMCQFATPFIVAVIGISTSFFCHRLSVAAIKIVAQIQGFSF
PVCLATPVTFGVVVILSTQLHNADHICKIPFPWLKDGDTFSNITYMILASVTGYLSLLFL
TAHIWTNRTERMSKENMMFYKPLYCGTFFDHSLILNRCKDGIKTGWPVTTSKQTAGDLTE
RSADTNSPMGPEAKGTDKSSDTIPLLYLCATMWHETETEMTQLLKSLFRMDIDQCARSIY
AEGIHHRDYYNFETHIFFDDAFEEGSNIANQYVETFIRVMAQTASSTYPKHIPLRSPRRR
ITPYGGRLTWFLPGGNKLVAHLKDKFKIRRKKRWSQVMYMYYFLSHKLDVEETDFDKQKE
RAKNIFILALDGDVDFRPSAVKLLVDKMKRNDQIGAACGRIHPIGDGPMVWYQKFEYAVS
HWLVKATEHITGCVLCSPGCFSLFRGSALMDCNVMRRYTTLPTQARHHIQYDQGEDRWLC
TLLLKQGYKVDYCAASDAYTFAPEGFKEFYNQRRRWTPSTMANILDLLSDWKVITDRNDN
VSMPYIALQMSWFISSVITPGVLLLMIVGATNLAYPELSLHAALLINLAPVVLFVIICFC
AKTEYQLNLAAALSIVYSLVMMIVLVGLIRESVEDGFCSVITLFLLFVSGVFVTAGLTHP
KEIGCLIHGFLFFIAIPSMSMLLMIYSITNLNNVSWGTREAPKPGTSNAKNSNKNVVQSF
LDKFCGCCQATSAYRQDEVNNKLEEVMSKFNEMESGRQQTDGTQPAQSKEEKEESSDRDA
EPTPLPKKDKYSKFLNFNYETSTKLKYLRIEEELFWKWLIKTYLSPGGKSGDGRQTEEEK
MKEKLKEENMIKQELKELRNKASVAYLLINALFITIIFFLQQSNLDTNGDLSVKIECGGG
DFLEVEPISMAFTVVFGLLLVIQFLCMIVHRLKTFLQINSITRIKQDFDVDQLFMDVVNE
ILEKKREEAAKEPETLKEPEAKGKQRLKQFIRNNVIKQLHVIDEVLLDKNKEVDKDDIGS
SSDVKTSRRSLNKEERKPTGRFKTVAAALGRMSSYKKLKLHDNNSFRQMFQTLTPSAQNS
VVETRVESIRHNGTPNLNETNDDLDTGEAATNQDDKPELSETQDDKKTDSTSTVSEEKRK
APIDAW
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagcaaagcggaatgaagaatccgaagaatggccggcagcattttctgcaaga
tgggacagatttgaggaagtgtccgaagagagaatattgtccgaagaccatgtattctgg
gataaagcttactgggtgaccaaagtcattttttctggactgctcttcgtgcttgtactt
tgctcagctgtagtttccaaaggcgttttacttgtactgacatggaacatatttacgcct
gctgaagttaacgcaacgcgatctggactaaagacgctagatggccattttcactacaac
attacggtttcaacaggaaaccgtaacattacgcttgatgacggagatacagtaacagat
atcaatttcatttgggctttatttctgatggttgttgcaccgaatatcttcacaattatt
ttctacacctggaggttaatattcaggaaaacaggaaaactaaaatggtttccactctca
gtggctctgatatctgcaacgcttcactcgattgggctcagtttctttgcattttaccta
cttccatcgatggatcccatatctggtctttggtactcttctagtataacattagttcct
tcagtcgtacaacttgctttcacaggaaaggcaatagctctaagacacaatgacaccaat
aaaattgaagatagttatgaggatattagcagtgaaactcaagttttacccgaaaacgac
aattccaacggcacagccacacccagaaggacgggtatttcattcaagacagcatggcct
ttgctagcaagcattctggcttgtgtgttcagtgcaacttcactgtgtttatggggcgtg
tatgtagcatctgcgtcacaaccggcggtatcagcggggcgagcaatgttgttcatattg
tcaccaatacttgtgtcttttggttggtgggaaatctttgtacctagtcagaagacgtta
gttgtcgataaggacgggatcaaagtgaaaaatgaatcttcagagaatggagaaaacgaa
aacaacaatacaccgaaagaaagtgagggcaatcttaaatcgaatgaccaaaagaagtat
ggcaatacgttttggagccgcatatatgatttgaaatatcaaacatataaaggaagattc
aaaatttatacaattgttaacgtatggaaagtaattttaactttcgttttggtgatagta
atatatagtttgtcatgcaatgactcttcaaactgtattgacgcactatttggaaaacgt
cagcaacccgcgaagcaaggctctgatttctttggtagcacatttctgctaaatgggggt
atgtgtcaatttgcgacgccatttatcgttgccgttattggtatttcgacaagtttcttt
tgtcataggttaagcgtggctgctataaagattgttgctcaaattcaaggcttttctttc
ccggtatgtttggcaacaccagtaacatttggagtggttgtgatcctatcaacacagtta
cacaatgcggaccacatatgcaagattccatttccgtggttgaaagatggagatacattt
tcaaacattacatatatgatactggcttcagtaacaggatacctgtctcttctgtttcta
acagctcatatatggacaaacaggacagaaaggatgagcaaagaaaacatgatgttttac
aagcctttatactgtggaacattctttgaccattcattaattctgaacagatgcaaggat
ggcattaaaacagggtggccagtgactacatcaaaacagacagcaggggatcttacagaa
cggagtgcagatacgaattcaccaatgggtccagaagccaaaggaacggataaaagtagt
gataccattccactcttatacttgtgtgctactatgtggcatgaaactgaaactgagatg
acacagttgttaaagtctctgttcagaatggacattgatcaatgtgcacgaagtatttat
gcggaagggattcatcaccgtgactactacaattttgaaactcacattttctttgatgac
gcattcgaggaagggagtaatattgctaatcaatatgtggaaacgtttataagagtaatg
gcccaaactgcaagttctacgtatccgaagcatattcccctgcgatcccctcgaaggaga
ataacaccttacggagggcggcttacatggttcttgcctggaggaaataaacttgtagct
catttgaaagataaattcaaaataagaagaaagaaacgatggagccaggtgatgtacatg
tactactttttatcacacaagcttgacgtagaagagacagattttgacaaacagaaggag
agagctaagaacatttttattctagctttagatggtgatgtagactttaggccatcagcc
gtgaagctgcttgttgataagatgaagcgaaatgatcagatcggagctgcttgtggtaga
atacatcctataggagatggtccaatggtttggtaccagaagtttgagtacgctgttagt
cactggctggtgaaggcaacagaacacattactggttgcgtgctgtgcagtccaggctgc
ttcagtctgtttcgaggttcagctctaatggactgtaatgttatgagacggtacactact
ctacctacacaagcacggcatcatatacagtatgatcaaggtgaagatagatggttgtgt
acattgttactgaaacaaggctataaagttgattactgtgccgcgtccgatgcttacaca
tttgcaccagaaggtttcaaagaattttacaatcagagacgccgctggacaccatcgacc
atggcaaatattttggatctcctatctgactggaaagtgataacagaccgcaacgataac
gtgtccatgccatacattgctctgcagatgtcctggtttatttcgtctgttataacaccc
ggtgtcttactgttgatgattgtcggggccacaaaccttgcctacccagaactgtctctt
catgcagcattgttgattaacctagcaccggttgttctgtttgtgattatttgcttctgt
gcaaagacagaatatcagctaaatctagcggctgccctttccatagtgtactcacttgtg
atgatgatagtcctcgttggtttaatacgagagtctgttgaagatggcttttgttcagtt
attacactgttcctattgtttgtgtctggtgtatttgtgactgctggattgacacaccca
aaggagatcggttgtctaattcatggattcttgttctttatcgcaataccttccatgtcg
atgcttctgatgatttattctattaccaacctaaacaatgtctcctggggaacgagggaa
gccccaaaaccaggaaccagcaatgcaaaaaacagtaacaagaatgttgtacagagtttc
ttggataaattctgcggttgttgccaagctacttcggcttacagacaggacgaagtcaat
aataaattggaagaggtcatgtccaaatttaatgaaatggaatctggtcggcagcagaca
gatggcactcagccagcacaaagcaaggaagaaaaggaagaaagttctgatcgggatgca
gaaccgacccctcttccaaagaaagacaagtattcaaaattcttaaatttcaactacgaa
acgtcaacgaagctaaaatatctgagaatagaggaagagctattttggaaatggttgata
aagacttatctctctcctggtggaaagtcaggtgacggccgccaaaccgaagaagagaaa
atgaaagagaaactgaaagaagaaaatatgattaagcaggaactgaaagaattaagaaac
aaagcgagtgtggcttatctgctgataaacgcactttttatcacaataatattttttctt
caacaatcaaatttggatacaaatggggatttgtcagtgaaaattgaatgtggcggtgga
gattttcttgaagtagagccaataagcatggcatttaccgttgtatttggactcctgctg
gtgattcagtttctgtgcatgattgtccatagacttaaaacgtttttgcaaatcaattca
attacccggatcaaacaagactttgacgtcgaccaacttttcatggatgtggtcaatgaa
atacttgaaaagaagcgtgaagaagcagcgaaagaaccagaaacactaaaagaaccggaa
gcaaagggaaaacaaagacttaaacaatttattagaaataatgttataaagcaactccat
gttatagatgaagtgctgcttgacaaaaataaagaagttgataaggatgacataggttct
tcttcagatgtaaaaacgtcacgtaggtcacttaacaaagaagagagaaaaccaacggga
aggtttaagacagtggcagcagcactcggccgcatgagtagctataagaagctgaaacta
cacgataataatagtttcaggcaaatgttccagacccttacaccatcagcccaaaacagt
gttgttgagactagagtagaatcaatcagacataacggcacacctaatctgaatgagaca
aatgacgatttagatacaggtgaagcagcaaccaatcaggatgacaaaccagaactgagc
gaaacacaagacgacaagaaaactgacagtacgtctacagtttcagaagagaaaaggaaa
gcaccgatagatgcttggtag
DBGET
integrated database retrieval system
