Mercenaria mercenaria (northern quahog): 123539361
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Entry
123539361 CDS
T07835
Name
(RefSeq) calsyntenin-1-like
KO
K22659
calsyntenin 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmer04515
]
123539361
Cell adhesion molecules [BR:
mmer04515
]
Cadherins
Cadherin related
123539361
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Toxin_R_bind_N
Amnionless
Laminin_G_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
123539361
NCBI-ProteinID:
XP_053379278
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All DBs
Position
14:38707625..38836563
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AA seq
986 aa
AA seq
DB search
MEKLLFLTFCVYGVGTVVSTSEPNAYTPEIISQYKNSRDIPLFRGKIREGETVVRLEPRL
AARDNDTVGSARLICRYEIVSNRKNIPFVIEVKNKETGEAELKVKEGMLLSYEKRKHYKF
NIFAYDCVDPPYNKKSNRAVVTVKVEDMDKYAPVFDKTTYFCEMEEDKLYDSIMKVRAHD
DDRAPENQGICAYDILDEDVPFVIDNDGNLKNTEKVSHKDRYNFILKVVARDCAGMVSTP
VFINIDVKETCKNGWTDFPEHIEYTPGSGRKQLTSNAHLRICDSKCVPDHISTKLSLATK
HIGKGCDRDTYSITSQRKLCGASEDSVDLLPPPSLTANWTNAIPTDDGHDGDKVYMFNGV
DIAVEVPNNHVDHRLHKHFTISTWMKHTFPNTVVSSHKKGNKEHLLCMSDGDGMNRHHYA
IYVHNTKLIFVLRRESEDAKDLEVFKPAEWRWDLDQINDGEWHHYAISMDFPNLSLYVDG
QLAETNSENFEILDDWPLHPTDRVHFTKLVVGACWKGLDEIYVDHFQGYLAGLSILKDKT
ESERVIQCLNNCQENLDFTELKDMPSGTSVSFNKDMTEFSITGQNASDIQVLVQKLAYVN
YRPFPTPGRRNLNVRTSVHCGHTEEILPLVESYVFVQHSNKPVITIAGKDVITGTKEQLD
EGIRIFKDLSIHVDFMLAVNEVDDRDETHDEDADINDTTELKKARLQYKLSKATLMQETM
VKKDNSEDVLLDMCTIRAEPVLNFYNEHLDLPKDEIKKFKMKLEGIETQAGLVIMDADTI
KNYETVMQNIRYVHNKAEELYMRKFVISCSSQSGRFVSNELEVLIAPVKDVEEHEAIMRA
NVAIDSRHKQVLSPKFEQQFAGTASTNLGMVAIIVVCVGFLLFMIVLGVLRIRAAHNRQR
VPSMDDRPEMEWDNSELNITVNPIDQELFEYEENPQKTSLPDDSDTDDDISECFHDDDGD
SSDDEDYDDGKTARKTLEWDDSTLSY
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacttttatttcttacattttgtgtttatggcgtcgggacagtagtttctacc
tcggagccaaatgcttacacaccagagataatatcacagtacaaaaatagccgagacatt
ccgttgtttagaggtaaaatacgggaaggtgaaactgtagtgcgtcttgagccgagactg
gctgctcgtgataatgatacggttggatctgcacgtctgatatgcagatatgaaattgtc
tcaaatcgaaaaaacattccatttgtgatagaagtgaagaacaaggaaacgggagaggca
gagcttaaagtaaaagaggggatgctactaagctatgaaaagaggaaacattataagttc
aatatatttgcctacgattgtgtagatccgccatacaacaaaaaatcaaacagagcggtt
gtaacagtgaaagttgaagatatggacaagtatgcaccagtatttgataaaacaacatac
ttttgtgaaatggaagaagacaagttgtatgacagtatcatgaaagtgagggcacatgat
gatgatagggcacctgagaatcaaggcatatgtgcatatgatatattggatgaggatgtc
ccatttgttatagacaatgatggtaacttgaagaatactgagaaggtgagccataaagat
cgatacaactttatactgaaggttgtggcccgggactgtgctggtatggtctctactcca
gtatttatcaacattgatgtaaaagaaacttgtaagaatggatggacagattttccagag
catatagaatacacacctggttctggacgtaaacagcttaccagtaatgcccatctacgt
atctgtgacagcaaatgtgttccagaccatatcagcacaaagttaagcctagcaaccaaa
cacattggaaagggctgcgacagggatacatacagtattacttcccaaagaaaactttgc
ggagccagtgaagacagtgttgaccttctgccaccaccatcattgaccgctaattggaca
aatgcaattccaacagacgatggacatgatggagacaaagtatacatgtttaacggagtt
gatattgctgtggaggtaccaaacaatcatgtggatcacagattgcacaaacatttcaca
atatccacgtggatgaagcacacattcccaaatactgtagtgagcagccacaagaaggga
aacaaagaacatttgctgtgtatgtctgatggagatggaatgaatcgtcatcactatgct
atatatgttcacaacacaaagttgatatttgtgttacggagagaaagcgaggatgcaaaa
gacctagaagtgttcaaaccagcggaatggcgctgggatctcgatcaaataaatgatgga
gagtggcatcactatgctatcagcatggacttcccaaatttgagtttgtatgtggatggt
cagttggcagaaacaaacagtgagaattttgagattctagatgactggccacttcatccc
acagatagagtccactttacaaagcttgtagtaggagcttgctggaaaggcctggatgag
atatatgttgaccatttccaaggttaccttgctggattgtcaattttgaaagataaaaca
gaaagtgaaagagttatacaatgtctcaacaactgtcaagaaaaccttgatttcactgaa
ctcaaagatatgccaagtggaacttctgtgagttttaacaaggatatgactgagttcagc
attacaggacagaatgcatcggacatacaagttttagtacagaaattggcctatgtgaac
tacagaccatttcctaccccaggacgtagaaatctgaatgttcgcacaagtgttcattgt
ggacatacagaagaaatcctgccattagttgagagctatgtatttgtacagcactcaaac
aagcctgtgataaccatagcaggcaaagacgtgatcacaggcacaaaagaacagcttgat
gaaggaattcgtatctttaaagatttgagtatccatgtagatttcatgttagctgtaaat
gaggtagatgacagagatgagacacatgatgaagatgcagacatcaatgatacaacagag
ctcaagaaagccaggctccaatacaagcttagcaaagctactctcatgcaggagactatg
gtcaagaaagataactctgaagatgttttactggacatgtgtaccattagggcagaacct
gttctcaacttctacaatgagcacctggacctaccaaaggatgaaattaagaagttcaaa
atgaagttggagggtatagagacccaggctgggcttgttatcatggatgctgatactata
aagaactatgagacagtgatgcagaatatcagatatgtacacaacaaggcagaggaatta
tacatgaggaagtttgtaatcagttgctcatcacagagtggaaggtttgtcagcaatgag
cttgaagtgctgatcgctccagtgaaggatgttgaggaacacgaggcaattatgcgtgca
aatgttgccattgacagcagacataaacaagttctatcacctaagtttgaacaacagttt
gctgggactgccagtacaaatcttggaatggttgctataattgttgtgtgtgtcggtttc
ttgttgtttatgattgtacttggtgtgttacgtatccgtgctgcccacaatagacaacgt
gttccatcaatggatgatagaccagaaatggaatgggacaattcagaactaaatataaca
gtgaacccgatagaccaagagttatttgagtatgaagagaatccacagaaaacatcatta
cctgatgacagtgatacggatgatgatatcagcgagtgtttccatgatgacgacggagat
tcctcagatgatgaagattatgatgatggcaaaacagcgagaaaaactctagagtgggat
gactcaacactctcatattaa
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