Mercenaria mercenaria (northern quahog): 123539430
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Entry
123539430 CDS
T07835
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123539430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123539430
Membrane trafficking [BR:
mmer04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123539430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
Clathrin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR5
WDR55
Beta-prop_THOC3
Beta-prop_WDR3_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_NWD2_C
Beta-prop_HPS5
EIF3I
Beta-prop_DCAF4
Beta-prop_WDR36-Utp21_2nd
Beta_prop_At2g24240
WD40
Motif
Other DBs
NCBI-GeneID:
123539430
NCBI-ProteinID:
XP_053385366
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All DBs
Position
18:6674200..6744175
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AA seq
1177 aa
AA seq
DB search
MASEAVAESPKQEINFDIEFDDSEFQSDLPIIDAPPTLESILNEDETTSVLEEDDISIPS
SIQMFKDSQSQDTSSLSSQDSSALAEKPSRKDRHRIKKQKAIHGSVLKPSRLKSIAAQLH
SAADKVDAGMPTAMAVSNLIAIGTSHGLVLVFDPKQVLKWCLGSTAVGAQYGAVSSLSFN
KDCTRLLSGFARGQITMWDLTNGKLIRTITDAHPPGTAVLHIKFTDSLVFAVCSDSGGSV
FELEFKRLIGMRTCESKCLFSGSRGEVCVIEPLHMSLATKDHPMQDVSILAMASLSKVLL
VTLTPQLKVVFTHPLKGNPSTLPLLAWQFVVIQVSESDRVIDPVLAFARESTIFFHQVVC
TSAQDIRCTGLQKISLSYKLLNITWMNTRTLVTIDTKEKMHVIDVRSEEELEVIDMSEVQ
LIYNTSFFKSLATGGNVSQALAYAGDHACYQTIVSHGGQLFMLGTKTVHVYSLRTWKERI
DVLVKDNRYQDALALALSFYEGKAKAVVSLQGTSAKKKEMVADLMLDLLFQYVDLSMTQF
CPEKGKIEELEDYYQTIVPVCVDYCLHLNRMDILFGRIYERFSMDVIAMGTFLECLEPYI
INDKLRTMPPVVMKDFVTHYEQKSMLESVEACIVHMDVTSLDIHHVVHLCWSHGLYDAII
YVYNKGMFDYTTPLEELLSTLKAAVDTGKQLSDSQIRLGNKLLVYISCCLAGRAYPLGDI
PEDHVHKVKHEVFESLTCRQSKGSPQDELPYPYLRTLLSFDTREFLNVLALAFEEEEFNT
SEGIAKRQHIVDILLQIMVESVGFTPTQVGILFTFLARQMARHENTITVNKILFEQVLEF
LCNPDDDSRHEERQQALLELSHAGGLQQVDEERFLYLAERAKFYRVCELLYEKRRQFDKI
LSCYLRDYARKYHAFNFIITILDSERFTPEEKASVQAEALKNLEELVSIDSKQAAQMVVS
NLSVSLADVVKQLKTEKPVLFEFLHGVMAFRDTSGSAIHTEKQVHVEASIFELYIDLMCQ
YKPNHVENFIKTNEGYRLEETLAICRKHHLSEATAYLLEKAGDIQGAFGIHLESLKGKLK
KLTECLLSKSDEGKDVQTQFGEVQTVLLMIVQLCQRNSGKMDEASREALWFPLLDALMFP
QRRIKDIDNKDILSDFKQLTHHVLNNMMGYIALPAIL
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgaagctgtcgcagaatcgccgaagcaggaaataaactttgatatcgagttt
gatgattcggagttccagtccgaccttcctataatagatgcacctcctacactggagagt
attctcaatgaagatgagacaacttcagttctggaggaggatgacatctccataccatct
tctattcaaatgttcaaggactcgcagtcacaagacacatcatcattgtctagtcaagac
agctccgccctggcagagaaacctagcagaaaagataggcataggataaagaaacagaaa
gcaatccatgggtctgtactgaagccaagtcgacttaaaagtatagctgcccagctgcat
tcagctgctgacaaggttgatgcaggaatgcctacagcaatggctgtgtctaacttgata
gccataggaacatcacatggtttagtgcttgtgtttgatccaaagcaagttttgaaatgg
tgtctaggaagtacagctgttggtgcccagtatggtgctgtttcctccctcagctttaat
aaggattgtacccggcttctcagtggatttgctagaggacagataacaatgtgggatctt
acaaatggcaagctgatcaggactataacagatgctcacccccctggtacggctgttcta
catataaagtttacagacagtctcgtgtttgctgtatgcagtgatagtggaggatccgtc
tttgaactggagtttaagagactgataggcatgagaacctgtgagtcaaaatgtctcttt
tctggaagccgaggagaggtatgtgttatagaaccacttcatatgagccttgccactaaa
gatcatcccatgcaagatgtttctatcctggctatggcctctctctcaaaggttctgctt
gttacactaacaccacaattgaaggttgtttttacccatcccctgaaaggcaatccctct
acactccctctgttggcttggcagtttgttgttatacaagtgtcagagagtgacagagtt
attgaccctgttctagcttttgctagggagtcgacaatattcttccaccaggttgtatgc
accagtgcccaggatatcagatgtacaggactacagaagatttccttgtcttataagcta
ctcaacattacgtggatgaatacaagaactctggttaccatagataccaaagagaagatg
catgttattgatgtgagatcagaggaagaattagaggttatagatatgagtgaggtgcag
ctgatatacaacacaagcttcttcaaatctctagctactgggggaaatgtcagccaagct
ttggcctatgccggagaccatgcctgttatcagactatagtaagtcatggtggacagttg
ttcatgctgggaaccaaaactgtacatgtttactcactacggacttggaaagagaggata
gatgtactggtgaaggacaaccggtaccaagatgctctggccctggctctgtcattctat
gaaggcaaggctaaagctgtggtgagcttgcaaggaaccagtgctaagaagaaagaaatg
gttgctgatttgatgttggatctgttgttccagtatgtagatctatctatgacccagttt
tgtcccgagaaaggaaagattgaagaactggaagactattaccagactatagtgccggtg
tgcgtggactattgcttacatttaaacagaatggatatattatttggtcgtatttatgaa
agattcagtatggatgtgatcgccatgggaacatttttggaatgtttagaaccatatatt
atcaatgataaactgagaacaatgcctccagtagtgatgaaggattttgttacacactat
gaacagaagagtatgctggagagtgtagaagcgtgtattgtacatatggatgtaaccagt
ctggatatacaccatgtggttcacctgtgttggagccatggactgtatgatgctattatt
tacgtatataataaaggaatgtttgattacactacacctctagaggaactactttctaca
ttgaaggcagcagtagacacaggaaaacaattatctgatagccagatcaggttgggaaac
aaattgcttgtatacatcagttgttgcctggctgggagagcttatccactgggagatata
cctgaggaccatgttcataaagttaaacatgaggtgttcgaaagtttaacatgtcggcag
tcaaaaggtagtcctcaagatgagcttccatacccatatcttcgtacactcctttccttt
gatacaagagaatttctgaacgtcttagctctggcatttgaggaggaagagtttaacacc
agtgaaggaattgctaaacgtcagcatatagtggatatactgctgcagatcatggtggaa
agtgtcggttttacaccaacacaagtgggaatcctgttcaccttcttggctcggcagatg
gctagacatgaaaacacaataactgtaaacaagatactatttgaacaggttctggagttt
ctatgtaaccctgatgatgactctagacatgaagagagacagcaagccttactggagctg
tcacatgctggaggcttacagcaggtggatgaggaaagatttctctacctggcagagaga
gctaaattctaccgtgtctgtgagttgctctatgagaagagaagacagtttgacaagatt
ttgtcatgttatttgagggattatgcaagaaagtatcacgcattcaactttatcattacc
atactggacagtgaaaggttcacacctgaggagaaagcaagtgtccaggctgaagcttta
aaaaatctagaggaattggtgtctatagacagtaagcaggcagcacagatggtggtgtct
aacctgtcagtcagcctggctgatgttgttaaacagctgaaaacagagaaaccagtgctg
tttgagttccttcatggtgtcatggcatttagggacacatctgggagtgcaatccacaca
gagaaacaggttcatgtagaagccagtatatttgagctgtacattgacctcatgtgtcag
tataaaccaaaccatgtggaaaatttcatcaaaaccaatgaaggctacagactggaagaa
actttagctatctgtagaaaacatcatttgtcagaagccacagcctacttgttggaaaaa
gctggggatatacaaggtgcatttggaatccacctagagagtttgaaaggaaaattgaag
aagttgacagaatgtttgcttagcaaatctgatgaaggaaaagatgtacagacacagttt
ggtgaagtgcagacagtattgttaatgatagtacagttatgtcagagaaactccgggaaa
atggatgaggcatcaagggaggcattgtggttcccattattagatgccctcatgtttcca
caaagaagaataaaagatatagacaacaaggatattctatcagatttcaaacagctgaca
catcatgtattaaacaatatgatgggatacatagccctacctgctatactatag
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